Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622237
Identifier: 116622237
GI number: 116622237
Start: 3968709
End: 3969398
Strand: Direct
Name: 116622237
Synonym: Acid_3130
Alternate gene names: NA
Gene position: 3968709-3969398 (Clockwise)
Preceding gene: 116622236
Following gene: 116622238
Centisome position: 39.82
GC content: 58.41
Gene sequence:
>690_bases ATGGCAATCCGCGTCTCCGCTATTTCAGCCGTGCTGTTGTTCTTGAGCGCGGCGACGGCACTCGCCCAGCAGCCGAAAGC GGCCGCAGCCCCCATCGTTCAGCCGGGCGCACCGGGGAAGCGCAGCAAAACTCTTGCGCCTGCGAGTGTGCGCACACGGT CCCGCGCTCCGGTGGAGGCCGACGTCAGCTTCATGCAGGGTATGATCCATCACCATTCACAGGCGGTCGAAATGGTTGAC TTACTCCGCACGCGGGGCCAGAGCAAAGAGCTCCAGTCGCTGGGAGAGCGAATTAGTATCTCGCAGACGGATGAGATCCG GTTTATGAAACAGTGGCTCGAAGATCGCGGCCAGCCGCTGGTAGCCGGGCACGGACATATGGAACACATGGCGGGCATGG ATCACGCAAATATGGATCACGCAAGTATGGGCGCGATGCCGCTAATGCCCGGTATGTTGACGCCGCAGCAAATGGAAACC CTGGCAAATTCCAAGGGGCTGGAATTCGATCATCTGTTTTTGACCGGGATGATTCAACATCACACCGGCGCCCTCATCAT GGTAGACGATCTTTTCGATGTTCCCGGCGCCGGCCAGGACCCGGTGTTGTTCGACTTTGCCAGCGACATTGATAATACCC AGCGCGCGGAGATCAATATCATGCGCGGCATGCTCAAGGAGAAACAGTAA
Upstream 100 bases:
>100_bases CCACCCGCGTTACCGCGTGTGGGAGGCCACGCGGCTCCGCGCGGTGAAGAAAAGTGAGTAAAACATTGACCCGGCAAAAG GCCAGGTTGTATATTGGCGC
Downstream 100 bases:
>100_bases TATGGAACGGATTTCTCTGCGTTCGCGCAGTATCACGATCCTCACGTTGGCGCTGTTCCCGACGCTCTGCGCCGGCCAAC CGGGCGCGGCACCGCCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; Signal Peptide
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MAIRVSAISAVLLFLSAATALAQQPKAAAAPIVQPGAPGKRSKTLAPASVRTRSRAPVEADVSFMQGMIHHHSQAVEMVD LLRTRGQSKELQSLGERISISQTDEIRFMKQWLEDRGQPLVAGHGHMEHMAGMDHANMDHASMGAMPLMPGMLTPQQMET LANSKGLEFDHLFLTGMIQHHTGALIMVDDLFDVPGAGQDPVLFDFASDIDNTQRAEINIMRGMLKEKQ
Sequences:
>Translated_229_residues MAIRVSAISAVLLFLSAATALAQQPKAAAAPIVQPGAPGKRSKTLAPASVRTRSRAPVEADVSFMQGMIHHHSQAVEMVD LLRTRGQSKELQSLGERISISQTDEIRFMKQWLEDRGQPLVAGHGHMEHMAGMDHANMDHASMGAMPLMPGMLTPQQMET LANSKGLEFDHLFLTGMIQHHTGALIMVDDLFDVPGAGQDPVLFDFASDIDNTQRAEINIMRGMLKEKQ >Mature_228_residues AIRVSAISAVLLFLSAATALAQQPKAAAAPIVQPGAPGKRSKTLAPASVRTRSRAPVEADVSFMQGMIHHHSQAVEMVDL LRTRGQSKELQSLGERISISQTDEIRFMKQWLEDRGQPLVAGHGHMEHMAGMDHANMDHASMGAMPLMPGMLTPQQMETL ANSKGLEFDHLFLTGMIQHHTGALIMVDDLFDVPGAGQDPVLFDFASDIDNTQRAEINIMRGMLKEKQ
Specific function: Unknown
COG id: COG3544
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24985; Mature: 24854
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.9 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRVSAISAVLLFLSAATALAQQPKAAAAPIVQPGAPGKRSKTLAPASVRTRSRAPVEA CEEEHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHH DVSFMQGMIHHHSQAVEMVDLLRTRGQSKELQSLGERISISQTDEIRFMKQWLEDRGQPL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEE VAGHGHMEHMAGMDHANMDHASMGAMPLMPGMLTPQQMETLANSKGLEFDHLFLTGMIQH EECCCHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH HTGALIMVDDLFDVPGAGQDPVLFDFASDIDNTQRAEINIMRGMLKEKQ CCCCEEEEECCCCCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure AIRVSAISAVLLFLSAATALAQQPKAAAAPIVQPGAPGKRSKTLAPASVRTRSRAPVEA EEEHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHH DVSFMQGMIHHHSQAVEMVDLLRTRGQSKELQSLGERISISQTDEIRFMKQWLEDRGQPL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEE VAGHGHMEHMAGMDHANMDHASMGAMPLMPGMLTPQQMETLANSKGLEFDHLFLTGMIQH EECCCHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH HTGALIMVDDLFDVPGAGQDPVLFDFASDIDNTQRAEINIMRGMLKEKQ CCCCEEEEECCCCCCCCCCCCEEEEEHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA