Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
---|---|
Accession | NC_008536 |
Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116622236
Identifier: 116622236
GI number: 116622236
Start: 3967562
End: 3968665
Strand: Direct
Name: 116622236
Synonym: Acid_3129
Alternate gene names: NA
Gene position: 3967562-3968665 (Clockwise)
Preceding gene: 116622227
Following gene: 116622237
Centisome position: 39.81
GC content: 60.33
Gene sequence:
>1104_bases ATGGACACAAGAGCCATTGCAAGGAGAATGCTCACCTTCGCCCTCGCATTCACGCTGGGTGTAACTGGTGTTAACGCGCA GTCGCCGGCTGATGAAGCCGCATCGGCAATCATCAAGCTGTTCGATCAATATCGTGTGGTGATGCTGGGCGAGATGCACG AGTCCATACAGGAACACTCCCTGCTGAACAAACTGGTGACGGCGCCGGGATTCCCGGAACGCGTCAATGACATCGTAGTC GAAGCCTGCAACGCACTTTATCAGGACACGATGGATCGCTATATCGCCGGCGAGGATGTGCCGGCGGAGCGCCTCCGGCC GGCGTGGGAAAACGTGGTCGGGGCACCCGGTGGAATCGCGGTTGCGCCCTATCACGGCTTGTTCGCCACGATTCGGTCCG TGAATCAAAGGTCGCCCAAGAACCGGCAGATCCGCGTGCTCTGCGGAGATCCGCCGATCGATTGGACGCGCGTCGAAACT CGCGACGACATCGCGCCATTCCTGGGCTTCCGAGACGAACACTATGCGAGCGTGGTCAGGTACAACGTGCTCGCGCTGCG CAGGAAAGCGTTGTTGATCATGGGTAGCGGGCATTTCCAGCGGCGGGAGGGTAAACCCGGCGTGATCGAACAACAAATGA TTCAGGCTTTCACGAAACCTTACGTAATAGTTGCCGGTAGTAACATCGTGGGAACGTACGACGATCTCGATGCGCGGTTT CAAGAACTGCCGGCGCCGTGTCTGAGGGAGATTAAAGGCAGTTGGCTGGATGAGTTGCCGCGCTGGCAGGAGTCGCCGGT GATCGGCTTTCCCGCCATATCCGCCCCCAAGACGAAGGTGGGGACGTGGGGGCAGACCGCCGATGCTTATTTGTACCTCG GGCCGCGGGACGAACTGACGCAGGGCGGCGACGCGTTCGATCTAGAGGGTACGCCATACGGAAGCGAGCTTCGGCGCCGG TGGAGAATCCTCTTCCCGAAGCCGCCGGAGGCGCTACCGAAGTCCGATGGCAAGGAGCATCCCTTGTTCCAGAGAATCGC ACCTCTCCCACCCGCGTTACCGCGTGTGGGAGGCCACGCGGCTCCGCGCGGTGAAGAAAAGTGA
Upstream 100 bases:
>100_bases CGATGCTTCCGGTCCGCTCCCCAGGTGAAGGATGAGTACTTGAGTTGCAGTCCGGGCCTATGGGAACAGCGGCTACGCCA GCGGCGTCTAAACCTCCGAC
Downstream 100 bases:
>100_bases GTAAAACATTGACCCGGCAAAAGGCCAGGTTGTATATTGGCGCATGGCAATCCGCGTCTCCGCTATTTCAGCCGTGCTGT TGTTCTTGAGCGCGGCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MDTRAIARRMLTFALAFTLGVTGVNAQSPADEAASAIIKLFDQYRVVMLGEMHESIQEHSLLNKLVTAPGFPERVNDIVV EACNALYQDTMDRYIAGEDVPAERLRPAWENVVGAPGGIAVAPYHGLFATIRSVNQRSPKNRQIRVLCGDPPIDWTRVET RDDIAPFLGFRDEHYASVVRYNVLALRRKALLIMGSGHFQRREGKPGVIEQQMIQAFTKPYVIVAGSNIVGTYDDLDARF QELPAPCLREIKGSWLDELPRWQESPVIGFPAISAPKTKVGTWGQTADAYLYLGPRDELTQGGDAFDLEGTPYGSELRRR WRILFPKPPEALPKSDGKEHPLFQRIAPLPPALPRVGGHAAPRGEEK
Sequences:
>Translated_367_residues MDTRAIARRMLTFALAFTLGVTGVNAQSPADEAASAIIKLFDQYRVVMLGEMHESIQEHSLLNKLVTAPGFPERVNDIVV EACNALYQDTMDRYIAGEDVPAERLRPAWENVVGAPGGIAVAPYHGLFATIRSVNQRSPKNRQIRVLCGDPPIDWTRVET RDDIAPFLGFRDEHYASVVRYNVLALRRKALLIMGSGHFQRREGKPGVIEQQMIQAFTKPYVIVAGSNIVGTYDDLDARF QELPAPCLREIKGSWLDELPRWQESPVIGFPAISAPKTKVGTWGQTADAYLYLGPRDELTQGGDAFDLEGTPYGSELRRR WRILFPKPPEALPKSDGKEHPLFQRIAPLPPALPRVGGHAAPRGEEK >Mature_367_residues MDTRAIARRMLTFALAFTLGVTGVNAQSPADEAASAIIKLFDQYRVVMLGEMHESIQEHSLLNKLVTAPGFPERVNDIVV EACNALYQDTMDRYIAGEDVPAERLRPAWENVVGAPGGIAVAPYHGLFATIRSVNQRSPKNRQIRVLCGDPPIDWTRVET RDDIAPFLGFRDEHYASVVRYNVLALRRKALLIMGSGHFQRREGKPGVIEQQMIQAFTKPYVIVAGSNIVGTYDDLDARF QELPAPCLREIKGSWLDELPRWQESPVIGFPAISAPKTKVGTWGQTADAYLYLGPRDELTQGGDAFDLEGTPYGSELRRR WRILFPKPPEALPKSDGKEHPLFQRIAPLPPALPRVGGHAAPRGEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40816; Mature: 40816
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTRAIARRMLTFALAFTLGVTGVNAQSPADEAASAIIKLFDQYRVVMLGEMHESIQEHS CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNKLVTAPGFPERVNDIVVEACNALYQDTMDRYIAGEDVPAERLRPAWENVVGAPGGIA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHCCCCCCEE VAPYHGLFATIRSVNQRSPKNRQIRVLCGDPPIDWTRVETRDDIAPFLGFRDEHYASVVR ECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCHHHHHHHHCCCHHHHHHHHH YNVLALRRKALLIMGSGHFQRREGKPGVIEQQMIQAFTKPYVIVAGSNIVGTYDDLDARF HHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEECCHHHHHHHH QELPAPCLREIKGSWLDELPRWQESPVIGFPAISAPKTKVGTWGQTADAYLYLGPRDELT HHCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHHC QGGDAFDLEGTPYGSELRRRWRILFPKPPEALPKSDGKEHPLFQRIAPLPPALPRVGGHA CCCCEEECCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHCCCCCC APRGEEK CCCCCCC >Mature Secondary Structure MDTRAIARRMLTFALAFTLGVTGVNAQSPADEAASAIIKLFDQYRVVMLGEMHESIQEHS CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNKLVTAPGFPERVNDIVVEACNALYQDTMDRYIAGEDVPAERLRPAWENVVGAPGGIA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHCCCCCCEE VAPYHGLFATIRSVNQRSPKNRQIRVLCGDPPIDWTRVETRDDIAPFLGFRDEHYASVVR ECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECCCHHHHHHHHCCCHHHHHHHHH YNVLALRRKALLIMGSGHFQRREGKPGVIEQQMIQAFTKPYVIVAGSNIVGTYDDLDARF HHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCEECCHHHHHHHH QELPAPCLREIKGSWLDELPRWQESPVIGFPAISAPKTKVGTWGQTADAYLYLGPRDELT HHCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHHC QGGDAFDLEGTPYGSELRRRWRILFPKPPEALPKSDGKEHPLFQRIAPLPPALPRVGGHA CCCCEEECCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHCCCCCC APRGEEK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA