Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622238
Identifier: 116622238
GI number: 116622238
Start: 3969400
End: 3971391
Strand: Direct
Name: 116622238
Synonym: Acid_3131
Alternate gene names: NA
Gene position: 3969400-3971391 (Clockwise)
Preceding gene: 116622237
Following gene: 116622239
Centisome position: 39.83
GC content: 62.95
Gene sequence:
>1992_bases ATGGAACGGATTTCTCTGCGTTCGCGCAGTATCACGATCCTCACGTTGGCGCTGTTCCCGACGCTCTGCGCCGGCCAACC GGGCGCGGCACCGCCGTCTAATCCGGCGCCTCCCACGGTCTACTCTAACCCGCGCGCGGGCGCGGACGATCCGCGCATCG GATTGAAAGGCGGCCTCTATGATGCCGGCGAAGCAGCCTTCGGCATGCAGCGGATCGCTACCCTGCCAAAGCCTCCGGGC TTCGCCCCCGGCACCGACCCTACGGCCGCGGCAGCGCCCGCGCAGCCTGCCGCAGATGCCGGCGGACGCGGCGGTCGCCC GGCGGCTGTTTCCTTCGGCTCCACCAACTCGGATCTGGCATTCAGCGGCAATCATCTCTTTGTGGGCAACTACAACGGAA TCAATTTCTATGACATTGACAGCCCGTCGAAGATCAAGCTGCGGACTTCGATTCTTTGCCCGGGGGGCCAGGGTGACGTT TCGGTTTACGGGCACTTACTGTTCATGTCCGCCGAGGCGATGAACGGACGCCTGGATTGCGGCACTCAGGGAAATCCTCC GCCTCCGGGCTATACGCCGCCGCCTCCTCCTCCTCCAGCAGAGACCGCGGCAGCGCCGGGCGCTCCGGGCGGCGGCCGCG CGCCGCGCGTGCCTCCTCCGCCGAGTCCGGACCGGTTCCGCGGCGTGCGCATCTTCGATATCAGCGATCTTGCGCACCCG AAGCAGGTCGCCGCGGTGCAGAGCTGCCGCGGGTCGCACACGCATTCGCTGCTGGTTGACCCGAAGGACAAAGACAACAT TTATGTATATATCTCCGGTACAGGGCCCGTGCGGCAGGGCGAGGAACTGGCGGGATGCTCGGGTGGCGATCCGAAGGCCA ACCCGGAGACTGCCTTATTCAGGATCGATATTATCAAGGTGCCCCTGGCCCATCCGGAGCAGGCGAAGATCGTCAACAGT CCGCGCATTTTCACCGACACCCAGAGCGGCGACATCAACGGCCTTTGGAAGGGTGGCAGCCATGGGGAAGGCACGCAGAC CACGTCGAGCACGAATCAGTGCCACGACATCACGATTTATTCCGCGCTCGGATTGGCGGCTGGGGCATGCTCCGGCAATG GCATCCTGCTGGACATTTCGGATCCGGTGAATCCCAAGCGTATCGACGCCGTGAGCGATCCGAATTACGCCTTCTGGCAT TCGGCGAATTTCAGCAACGACGGCAAGAAGGTGTTGTTCACTGACGAATGGGGCGGCGGGGGCCAGCCGCGATGCCGGGC GACCGACCCGATGCATTGGGGCGCGGACGCTATCTTCACGCTCGATAAGCGCAAGCTGACGCTCTCCTCTTACTACAAGA TGCCCGCGCCGCAGACCGACAACGAGAATTGCGTCGCGCATAACGGATCGTTGATTCCGATTCCGGGCCGCGACGTTCTA GTGCAGTCCTGGTATCAGGGAGGGATTTCGGTGGTGGATTTCACCGACGCCAGCCATCCCTACGAGATCGCATTTTTCGA TCGCGGGCCGGTGGATAGCACCAAACGCGGCATGGGCGGGCAGTGGTCCACTTACTGGTACAACGGGTACATCTATGGTT CGGAGATTGCGCGCGGCGTAGACGTGCTCAAGCTGGTGCCGAACAAATATCTCACGCAAAACGAGATTGACGCCGCGAGC CAGGTGCATTTCGACGAGCTCAACGTGCAGAATCAGCCGAAGATCACGTGGCCGGCGAACTTCATCGTCGCGCGGGCGTA CGTCGATCAGTTGAGCCGGAGCGGGGCGCTTGCGCCGCAGCGCATTGAGCAGCTGAACACTACGATTGGGAGAGTGGAAG CGTCGCGTTCCAACCGTAAGGAATCCGCGCAGCTGCAGGCGATGGCCGACAGCCTCGATAAGGACGCGCCCACGGCAAAG ACGCCGTCGGACGGGGACCGTATGCGTGCGTTGGCGGCGGTCATTCGACAGACCACCGCGATGCGGAACTAG
Upstream 100 bases:
>100_bases GGCCAGGACCCGGTGTTGTTCGACTTTGCCAGCGACATTGATAATACCCAGCGCGCGGAGATCAATATCATGCGCGGCAT GCTCAAGGAGAAACAGTAAT
Downstream 100 bases:
>100_bases AGAATCGAATTAGAAGCCGTCTGAAAGGCGGCCACGGTCGAAAAAGCCCACGTGGAGCAAGGGAATACTCCTCGAAAAAG TGCGGCGTAGCTGACGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: LVIVD Repeat-Containing Protein
Number of amino acids: Translated: 663; Mature: 663
Protein sequence:
>663_residues MERISLRSRSITILTLALFPTLCAGQPGAAPPSNPAPPTVYSNPRAGADDPRIGLKGGLYDAGEAAFGMQRIATLPKPPG FAPGTDPTAAAAPAQPAADAGGRGGRPAAVSFGSTNSDLAFSGNHLFVGNYNGINFYDIDSPSKIKLRTSILCPGGQGDV SVYGHLLFMSAEAMNGRLDCGTQGNPPPPGYTPPPPPPPAETAAAPGAPGGGRAPRVPPPPSPDRFRGVRIFDISDLAHP KQVAAVQSCRGSHTHSLLVDPKDKDNIYVYISGTGPVRQGEELAGCSGGDPKANPETALFRIDIIKVPLAHPEQAKIVNS PRIFTDTQSGDINGLWKGGSHGEGTQTTSSTNQCHDITIYSALGLAAGACSGNGILLDISDPVNPKRIDAVSDPNYAFWH SANFSNDGKKVLFTDEWGGGGQPRCRATDPMHWGADAIFTLDKRKLTLSSYYKMPAPQTDNENCVAHNGSLIPIPGRDVL VQSWYQGGISVVDFTDASHPYEIAFFDRGPVDSTKRGMGGQWSTYWYNGYIYGSEIARGVDVLKLVPNKYLTQNEIDAAS QVHFDELNVQNQPKITWPANFIVARAYVDQLSRSGALAPQRIEQLNTTIGRVEASRSNRKESAQLQAMADSLDKDAPTAK TPSDGDRMRALAAVIRQTTAMRN
Sequences:
>Translated_663_residues MERISLRSRSITILTLALFPTLCAGQPGAAPPSNPAPPTVYSNPRAGADDPRIGLKGGLYDAGEAAFGMQRIATLPKPPG FAPGTDPTAAAAPAQPAADAGGRGGRPAAVSFGSTNSDLAFSGNHLFVGNYNGINFYDIDSPSKIKLRTSILCPGGQGDV SVYGHLLFMSAEAMNGRLDCGTQGNPPPPGYTPPPPPPPAETAAAPGAPGGGRAPRVPPPPSPDRFRGVRIFDISDLAHP KQVAAVQSCRGSHTHSLLVDPKDKDNIYVYISGTGPVRQGEELAGCSGGDPKANPETALFRIDIIKVPLAHPEQAKIVNS PRIFTDTQSGDINGLWKGGSHGEGTQTTSSTNQCHDITIYSALGLAAGACSGNGILLDISDPVNPKRIDAVSDPNYAFWH SANFSNDGKKVLFTDEWGGGGQPRCRATDPMHWGADAIFTLDKRKLTLSSYYKMPAPQTDNENCVAHNGSLIPIPGRDVL VQSWYQGGISVVDFTDASHPYEIAFFDRGPVDSTKRGMGGQWSTYWYNGYIYGSEIARGVDVLKLVPNKYLTQNEIDAAS QVHFDELNVQNQPKITWPANFIVARAYVDQLSRSGALAPQRIEQLNTTIGRVEASRSNRKESAQLQAMADSLDKDAPTAK TPSDGDRMRALAAVIRQTTAMRN >Mature_663_residues MERISLRSRSITILTLALFPTLCAGQPGAAPPSNPAPPTVYSNPRAGADDPRIGLKGGLYDAGEAAFGMQRIATLPKPPG FAPGTDPTAAAAPAQPAADAGGRGGRPAAVSFGSTNSDLAFSGNHLFVGNYNGINFYDIDSPSKIKLRTSILCPGGQGDV SVYGHLLFMSAEAMNGRLDCGTQGNPPPPGYTPPPPPPPAETAAAPGAPGGGRAPRVPPPPSPDRFRGVRIFDISDLAHP KQVAAVQSCRGSHTHSLLVDPKDKDNIYVYISGTGPVRQGEELAGCSGGDPKANPETALFRIDIIKVPLAHPEQAKIVNS PRIFTDTQSGDINGLWKGGSHGEGTQTTSSTNQCHDITIYSALGLAAGACSGNGILLDISDPVNPKRIDAVSDPNYAFWH SANFSNDGKKVLFTDEWGGGGQPRCRATDPMHWGADAIFTLDKRKLTLSSYYKMPAPQTDNENCVAHNGSLIPIPGRDVL VQSWYQGGISVVDFTDASHPYEIAFFDRGPVDSTKRGMGGQWSTYWYNGYIYGSEIARGVDVLKLVPNKYLTQNEIDAAS QVHFDELNVQNQPKITWPANFIVARAYVDQLSRSGALAPQRIEQLNTTIGRVEASRSNRKESAQLQAMADSLDKDAPTAK TPSDGDRMRALAAVIRQTTAMRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70506; Mature: 70506
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERISLRSRSITILTLALFPTLCAGQPGAAPPSNPAPPTVYSNPRAGADDPRIGLKGGLY CCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC DAGEAAFGMQRIATLPKPPGFAPGTDPTAAAAPAQPAADAGGRGGRPAAVSFGSTNSDLA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEE FSGNHLFVGNYNGINFYDIDSPSKIKLRTSILCPGGQGDVSVYGHLLFMSAEAMNGRLDC ECCCEEEEECCCCEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEHHHCCCEECC GTQGNPPPPGYTPPPPPPPAETAAAPGAPGGGRAPRVPPPPSPDRFRGVRIFDISDLAHP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEEEEECCCCCCH KQVAAVQSCRGSHTHSLLVDPKDKDNIYVYISGTGPVRQGEELAGCSGGDPKANPETALF HHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCEEEE RIDIIKVPLAHPEQAKIVNSPRIFTDTQSGDINGLWKGGSHGEGTQTTSSTNQCHDITIY EEEEEEECCCCCCCCEECCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEE SALGLAAGACSGNGILLDISDPVNPKRIDAVSDPNYAFWHSANFSNDGKKVLFTDEWGGG HHHHHHHCCCCCCCEEEECCCCCCCCEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCC GQPRCRATDPMHWGADAIFTLDKRKLTLSSYYKMPAPQTDNENCVAHNGSLIPIPGRDVL CCCCCCCCCCCCCCCCEEEEECCCEEEHHHHCCCCCCCCCCCCEEEECCCEEEECCCHHH VQSWYQGGISVVDFTDASHPYEIAFFDRGPVDSTKRGMGGQWSTYWYNGYIYGSEIARGV HHHHHHCCEEEEEECCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEEEEEEEHHHHHCCH DVLKLVPNKYLTQNEIDAASQVHFDELNVQNQPKITWPANFIVARAYVDQLSRSGALAPQ HHHHHCCCCCCCCCCCCHHHHEEHHHCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCHH RIEQLNTTIGRVEASRSNRKESAQLQAMADSLDKDAPTAKTPSDGDRMRALAAVIRQTTA HHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH MRN CCC >Mature Secondary Structure MERISLRSRSITILTLALFPTLCAGQPGAAPPSNPAPPTVYSNPRAGADDPRIGLKGGLY CCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC DAGEAAFGMQRIATLPKPPGFAPGTDPTAAAAPAQPAADAGGRGGRPAAVSFGSTNSDLA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEE FSGNHLFVGNYNGINFYDIDSPSKIKLRTSILCPGGQGDVSVYGHLLFMSAEAMNGRLDC ECCCEEEEECCCCEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEEEEEEHHHCCCEECC GTQGNPPPPGYTPPPPPPPAETAAAPGAPGGGRAPRVPPPPSPDRFRGVRIFDISDLAHP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEEEEECCCCCCH KQVAAVQSCRGSHTHSLLVDPKDKDNIYVYISGTGPVRQGEELAGCSGGDPKANPETALF HHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCEEEE RIDIIKVPLAHPEQAKIVNSPRIFTDTQSGDINGLWKGGSHGEGTQTTSSTNQCHDITIY EEEEEEECCCCCCCCEECCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEE SALGLAAGACSGNGILLDISDPVNPKRIDAVSDPNYAFWHSANFSNDGKKVLFTDEWGGG HHHHHHHCCCCCCCEEEECCCCCCCCEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCC GQPRCRATDPMHWGADAIFTLDKRKLTLSSYYKMPAPQTDNENCVAHNGSLIPIPGRDVL CCCCCCCCCCCCCCCCEEEEECCCEEEHHHHCCCCCCCCCCCCEEEECCCEEEECCCHHH VQSWYQGGISVVDFTDASHPYEIAFFDRGPVDSTKRGMGGQWSTYWYNGYIYGSEIARGV HHHHHHCCEEEEEECCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEEEEEEEHHHHHCCH DVLKLVPNKYLTQNEIDAASQVHFDELNVQNQPKITWPANFIVARAYVDQLSRSGALAPQ HHHHHCCCCCCCCCCCCHHHHEEHHHCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCHH RIEQLNTTIGRVEASRSNRKESAQLQAMADSLDKDAPTAKTPSDGDRMRALAAVIRQTTA HHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH MRN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA