Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
---|---|
Accession | NC_008536 |
Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116622099
Identifier: 116622099
GI number: 116622099
Start: 3773349
End: 3774935
Strand: Reverse
Name: 116622099
Synonym: Acid_2986
Alternate gene names: NA
Gene position: 3774935-3773349 (Counterclockwise)
Preceding gene: 116622108
Following gene: 116622098
Centisome position: 37.88
GC content: 59.17
Gene sequence:
>1587_bases ATGTACGGGGGTCAAGCGATAGAACTCGATGAAGTCCGTGAGCAGGCGGTGCGGGCGGAACTCGCCCATCTGATGGAGAG CGCTTCCTTTCGGACGAGCAAGCGAAGCCGCGAGTTCCTCCAGTACATCGTTGAACACACGATCCACGGTCCTACCGGCT CTCTCAAGGAGCGTTCGATTGGAGTGGATCTATTTCAACTTCCGCAGGACTTCGATCCTGGCCAGCACACGATTGTTCGC GTGACCGCAAACGAAGTACGAAAGAGGCTGGCGCAGCACTACCTCGCCGAAAACGGCAATCCCCACCCGGTGAGGATCGA ATTGTCCGCAGGTTCGTACAGAGCCGGCTTCCGTTGGGAAGCGCCGGCAGCCGAGGCGGCTGAGATAAACGTACCAGTCG ATCGACTCCCAGTTCCGGAACCAGCCGTCGCCACACAGCGAATTCCTCCGCCAGCGAACCGCTTCATACACACTGTCGTT CCTTGGGTAGTGGCTTTCATCGCAATCGCCGGTGGCCTATCTTGGGCGAAATGGGCCGGGGTGAAACCTACCTCCGCCGA ATCCAGCGCAGGCGTTGTTCCGGGTATCGTATCCGCTACGCTGCCCGCAGACGATGATCTGCGGATTATTGTGGGCGCCG TGAATCCTTTCATGGACCGTAGCGGACGGACCTGGGGACCGGACCGGTTCTTTTCTGGAGGCTCGGTTCTGCTTCATCCG TCGGAGAGGATCGTTCGAACTCTGGATCCCGATCTCTATCGCCACTTGCGTACCGGCGATTTCCGATATGCCATCCCACT GAAGCCGGGCACCTATGAACTGCACCTCCACTTTGCAGAGACGGGGTTGGCGGACTTCATCAGCGCGGAATCGAGCGGCG AGGGGCAGCGCGTCTTTCATGTCTCCGCAAATGGAAAACGCCTTCTGGATTTCTTCGACGTGGTCGCCGATGCCAACGGT GTCAACACCTCCGACGAGCGGGTTTTTCGCAATATTGCGCCCGCCGAGGACGGCTTCCTTCACCTGGCGTTTTCTCCGGT CAGAGGCACGGCGATGCTGAGTGCAATCGAGGTGCTGCCGGTAACTGCGGGCAAACTCAGGCCGATCCGAATTCGCGCGG GTTGGACCGCTTCCTGGAAAAATTCCGCGGGACAAGAATGGCTGGCCGATTCGTTTTTTCTGGGAGGCAATGCCTTGGTT CGCCGCACGAATCCGGCTCAGGACAGCAATTCGGCCGCGCCGGACATCGCGCTGTATGCCAGCGAACGATGGGGCAATTT CTCCTACGCCCTGCCGCTCCCCGAAGGGAAATATCGCGTCACGCTAAAGTTCTGTGAGGGCCACTACGGCAAACGGAACA GCGGCGCTGGAGGGGTTGGCAGCCGACTTTTCGACGTTTATTGCAACGGCGTCGCCTTGATGCGGAACTTCGACATTTTC AAGGAGGCCGGCGGCGAAGGCCGGCCAATCGACCGCTCCTTCTCGGGTATCCGGCCTAACGCTCAAGGCAAGATCCTTCT TTCGTTCGTGCCGGTCGTTGGTATGGCCTGCGTGAACGCGATTGAAGTTACAGAAGACACCCGGTAG
Upstream 100 bases:
>100_bases ACCGGCAGAGAATGGACGTTGCGGTCTAACGGTTAGCCAGAGCCTGTCAGCTTCACCCGGACCGCTTGAATCAGGTGTGA TATGATTGGCCGCAAGCGAG
Downstream 100 bases:
>100_bases CGATTGCGCTTCGACAGGCTTCGGGCTTAACTGTGCTTCTAACGGTTAGGCGGCTCAATTACCCTGAACATCGAACATGG GCAACCTTCTGAGCTCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MYGGQAIELDEVREQAVRAELAHLMESASFRTSKRSREFLQYIVEHTIHGPTGSLKERSIGVDLFQLPQDFDPGQHTIVR VTANEVRKRLAQHYLAENGNPHPVRIELSAGSYRAGFRWEAPAAEAAEINVPVDRLPVPEPAVATQRIPPPANRFIHTVV PWVVAFIAIAGGLSWAKWAGVKPTSAESSAGVVPGIVSATLPADDDLRIIVGAVNPFMDRSGRTWGPDRFFSGGSVLLHP SERIVRTLDPDLYRHLRTGDFRYAIPLKPGTYELHLHFAETGLADFISAESSGEGQRVFHVSANGKRLLDFFDVVADANG VNTSDERVFRNIAPAEDGFLHLAFSPVRGTAMLSAIEVLPVTAGKLRPIRIRAGWTASWKNSAGQEWLADSFFLGGNALV RRTNPAQDSNSAAPDIALYASERWGNFSYALPLPEGKYRVTLKFCEGHYGKRNSGAGGVGSRLFDVYCNGVALMRNFDIF KEAGGEGRPIDRSFSGIRPNAQGKILLSFVPVVGMACVNAIEVTEDTR
Sequences:
>Translated_528_residues MYGGQAIELDEVREQAVRAELAHLMESASFRTSKRSREFLQYIVEHTIHGPTGSLKERSIGVDLFQLPQDFDPGQHTIVR VTANEVRKRLAQHYLAENGNPHPVRIELSAGSYRAGFRWEAPAAEAAEINVPVDRLPVPEPAVATQRIPPPANRFIHTVV PWVVAFIAIAGGLSWAKWAGVKPTSAESSAGVVPGIVSATLPADDDLRIIVGAVNPFMDRSGRTWGPDRFFSGGSVLLHP SERIVRTLDPDLYRHLRTGDFRYAIPLKPGTYELHLHFAETGLADFISAESSGEGQRVFHVSANGKRLLDFFDVVADANG VNTSDERVFRNIAPAEDGFLHLAFSPVRGTAMLSAIEVLPVTAGKLRPIRIRAGWTASWKNSAGQEWLADSFFLGGNALV RRTNPAQDSNSAAPDIALYASERWGNFSYALPLPEGKYRVTLKFCEGHYGKRNSGAGGVGSRLFDVYCNGVALMRNFDIF KEAGGEGRPIDRSFSGIRPNAQGKILLSFVPVVGMACVNAIEVTEDTR >Mature_528_residues MYGGQAIELDEVREQAVRAELAHLMESASFRTSKRSREFLQYIVEHTIHGPTGSLKERSIGVDLFQLPQDFDPGQHTIVR VTANEVRKRLAQHYLAENGNPHPVRIELSAGSYRAGFRWEAPAAEAAEINVPVDRLPVPEPAVATQRIPPPANRFIHTVV PWVVAFIAIAGGLSWAKWAGVKPTSAESSAGVVPGIVSATLPADDDLRIIVGAVNPFMDRSGRTWGPDRFFSGGSVLLHP SERIVRTLDPDLYRHLRTGDFRYAIPLKPGTYELHLHFAETGLADFISAESSGEGQRVFHVSANGKRLLDFFDVVADANG VNTSDERVFRNIAPAEDGFLHLAFSPVRGTAMLSAIEVLPVTAGKLRPIRIRAGWTASWKNSAGQEWLADSFFLGGNALV RRTNPAQDSNSAAPDIALYASERWGNFSYALPLPEGKYRVTLKFCEGHYGKRNSGAGGVGSRLFDVYCNGVALMRNFDIF KEAGGEGRPIDRSFSGIRPNAQGKILLSFVPVVGMACVNAIEVTEDTR
Specific function: Unknown
COG id: COG5616
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57724; Mature: 57724
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGGQAIELDEVREQAVRAELAHLMESASFRTSKRSREFLQYIVEHTIHGPTGSLKERSI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCC GVDLFQLPQDFDPGQHTIVRVTANEVRKRLAQHYLAENGNPHPVRIELSAGSYRAGFRWE CCHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEC APAAEAAEINVPVDRLPVPEPAVATQRIPPPANRFIHTVVPWVVAFIAIAGGLSWAKWAG CCCCCCEEECCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCC VKPTSAESSAGVVPGIVSATLPADDDLRIIVGAVNPFMDRSGRTWGPDRFFSGGSVLLHP CCCCCCCCCCCCCCCHHEECCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCEEEECC SERIVRTLDPDLYRHLRTGDFRYAIPLKPGTYELHLHFAETGLADFISAESSGEGQRVFH HHHHHHHCCHHHHHHHCCCCEEEEEECCCCCEEEEEEEHHCCHHHHHCCCCCCCCCEEEE VSANGKRLLDFFDVVADANGVNTSDERVFRNIAPAEDGFLHLAFSPVRGTAMLSAIEVLP EECCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHEE VTAGKLRPIRIRAGWTASWKNSAGQEWLADSFFLGGNALVRRTNPAQDSNSAAPDIALYA CCCCCEEEEEEEECCCCCCCCCCCHHHHHHHEEECCCEEEECCCCCCCCCCCCCCEEEEE SERWGNFSYALPLPEGKYRVTLKFCEGHYGKRNSGAGGVGSRLFDVYCNGVALMRNFDIF ECCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCHHH KEAGGEGRPIDRSFSGIRPNAQGKILLSFVPVVGMACVNAIEVTEDTR HHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHEECCCCC >Mature Secondary Structure MYGGQAIELDEVREQAVRAELAHLMESASFRTSKRSREFLQYIVEHTIHGPTGSLKERSI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCC GVDLFQLPQDFDPGQHTIVRVTANEVRKRLAQHYLAENGNPHPVRIELSAGSYRAGFRWE CCHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEC APAAEAAEINVPVDRLPVPEPAVATQRIPPPANRFIHTVVPWVVAFIAIAGGLSWAKWAG CCCCCCEEECCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCC VKPTSAESSAGVVPGIVSATLPADDDLRIIVGAVNPFMDRSGRTWGPDRFFSGGSVLLHP CCCCCCCCCCCCCCCHHEECCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCEEEECC SERIVRTLDPDLYRHLRTGDFRYAIPLKPGTYELHLHFAETGLADFISAESSGEGQRVFH HHHHHHHCCHHHHHHHCCCCEEEEEECCCCCEEEEEEEHHCCHHHHHCCCCCCCCCEEEE VSANGKRLLDFFDVVADANGVNTSDERVFRNIAPAEDGFLHLAFSPVRGTAMLSAIEVLP EECCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHEE VTAGKLRPIRIRAGWTASWKNSAGQEWLADSFFLGGNALVRRTNPAQDSNSAAPDIALYA CCCCCEEEEEEEECCCCCCCCCCCHHHHHHHEEECCCEEEECCCCCCCCCCCCCCEEEEE SERWGNFSYALPLPEGKYRVTLKFCEGHYGKRNSGAGGVGSRLFDVYCNGVALMRNFDIF ECCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCHHH KEAGGEGRPIDRSFSGIRPNAQGKILLSFVPVVGMACVNAIEVTEDTR HHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA