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The map label for this gene is dgoD [H]

Identifier: 116622098

GI number: 116622098

Start: 3771967

End: 3773052

Strand: Reverse

Name: dgoD [H]

Synonym: Acid_2985

Alternate gene names: 116622098

Gene position: 3773052-3771967 (Counterclockwise)

Preceding gene: 116622099

Following gene: 116622097

Centisome position: 37.86

GC content: 63.26

Gene sequence:

>1086_bases
ATGCCGGGTCCACTGAATCCTCAACTCGAAATGGTTGCACTCGACGCATTCGCCGTACGCGAGCCTGCTTCGAGGCGCGC
ATACACAATCCTTCGCCTGCGCACCCGGTCGGGAGCACAGGGCTATGGCGAGTGTTCGCGCATCTCCCGGGCGGACCTCA
CTGCCTTGCGTGGCGCGATCCAGGGTAGAGAGGCGAGCAACTTCGAGACGGTCCGGCGCGGTATATCCCTCTCACCGGCG
CTCGCCGGTCTCGAGATGGCCATGTTGGACGCTCTCGGAATTTTTGCCAATGCGCCGGTCTACCAGGTGCTGGGTGGGCC
TACGAGAAACCGAGCCCGAGCGCTTGCTCGAATTCAAGGCGACACGGACGAATTGGTTGCGGCCTCGGTAGTCCGAGCCC
GCGCGGGCGGTCACCAGGCTTTCATGATTCCGGTCCCGCGAACCGGAGCCCCCAACCACAGTGCGACTCTGGTGGCCGCC
ACCCAACAGCGACTCGCAGCGGTCCGCTCCGCGGCGGGAGAAGGCGCCGATTTCGTGCTTGACGCAGGCGCCGCGCTCAC
CCCAGGCGACGCCTCCAGTATCGCCGCAGCATTCGAACGCGCCCACCTGCTATGGTTTGACGAACCTTGCCGCATCTCCA
ACCTGACCGCCGCATACCGAATCGCGGTCGAAAACGTCACTCCGATAGGCTTCGGACGATTCGCCGACGAGGCCGGAGTC
TTTCAGGACTTGCTGCGCGGCGATGCTATTGACGTCATCCGGGCCGACATCGCCCGCCAGGGCATCACTCGGATCCGCCG
CATCGCAGCATTGGCCGAGACGTATTACGTAGCAGTGGCACCGTTCCATGATGGCGGGCCAATCGCAACTGCCGCTGCCC
TGCACCTGGCGGCAAGCCTTCCCAATTTCTTTATCCAACAGTTGCCCACGCCTTTTGCGGAGCAGGACCGTGATATGCGT
GCTCGGCTGGCAGGCAATTCGATCGAAGCTGTCAAGGACGGATTTCTTGAACTGCCGCGGGGTCCGGGATTGGGAGTCCG
GGTGAACGAGGCGGCGCTGAATGAGTATCGGGAGGTCGAAGGATGA

Upstream 100 bases:

>100_bases
TCCATTCGAATTCGAAGACCGATGAGCAGCAAGAGACTGTCAGTCTGAGGCATGGCCGGGGTGTTCCGGGTTAACCGAAG
GGAGTATTTTCGCGCGCTGT

Downstream 100 bases:

>100_bases
AGCGGCGGCAATTTCTGGCCGGGGTCGGGACAATGGCCGGCGGCAAATTGATGGGATCGCCGGAAGGCCGACCGTCGCTA
TCGTTCTGCGACTGCGCTAT

Product: mandelate racemase/muconate lactonizing protein

Products: NA

Alternate protein names: GalD [H]

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MPGPLNPQLEMVALDAFAVREPASRRAYTILRLRTRSGAQGYGECSRISRADLTALRGAIQGREASNFETVRRGISLSPA
LAGLEMAMLDALGIFANAPVYQVLGGPTRNRARALARIQGDTDELVAASVVRARAGGHQAFMIPVPRTGAPNHSATLVAA
TQQRLAAVRSAAGEGADFVLDAGAALTPGDASSIAAAFERAHLLWFDEPCRISNLTAAYRIAVENVTPIGFGRFADEAGV
FQDLLRGDAIDVIRADIARQGITRIRRIAALAETYYVAVAPFHDGGPIATAAALHLAASLPNFFIQQLPTPFAEQDRDMR
ARLAGNSIEAVKDGFLELPRGPGLGVRVNEAALNEYREVEG

Sequences:

>Translated_361_residues
MPGPLNPQLEMVALDAFAVREPASRRAYTILRLRTRSGAQGYGECSRISRADLTALRGAIQGREASNFETVRRGISLSPA
LAGLEMAMLDALGIFANAPVYQVLGGPTRNRARALARIQGDTDELVAASVVRARAGGHQAFMIPVPRTGAPNHSATLVAA
TQQRLAAVRSAAGEGADFVLDAGAALTPGDASSIAAAFERAHLLWFDEPCRISNLTAAYRIAVENVTPIGFGRFADEAGV
FQDLLRGDAIDVIRADIARQGITRIRRIAALAETYYVAVAPFHDGGPIATAAALHLAASLPNFFIQQLPTPFAEQDRDMR
ARLAGNSIEAVKDGFLELPRGPGLGVRVNEAALNEYREVEG
>Mature_360_residues
PGPLNPQLEMVALDAFAVREPASRRAYTILRLRTRSGAQGYGECSRISRADLTALRGAIQGREASNFETVRRGISLSPAL
AGLEMAMLDALGIFANAPVYQVLGGPTRNRARALARIQGDTDELVAASVVRARAGGHQAFMIPVPRTGAPNHSATLVAAT
QQRLAAVRSAAGEGADFVLDAGAALTPGDASSIAAAFERAHLLWFDEPCRISNLTAAYRIAVENVTPIGFGRFADEAGVF
QDLLRGDAIDVIRADIARQGITRIRRIAALAETYYVAVAPFHDGGPIATAAALHLAASLPNFFIQQLPTPFAEQDRDMRA
RLAGNSIEAVKDGFLELPRGPGLGVRVNEAALNEYREVEG

Specific function: Catalyzes the dehydration of D-galactonate to 2-keto-3- deoxy-D-galactonate [H]

COG id: COG4948

COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. GalD subfamily [H]

Homologues:

Organism=Escherichia coli, GI48994953, Length=356, Percent_Identity=26.123595505618, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI1787864, Length=379, Percent_Identity=24.802110817942, Blast_Score=95, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018110
- InterPro:   IPR013342
- InterPro:   IPR013341
- InterPro:   IPR001354 [H]

Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]

EC number: =4.2.1.6 [H]

Molecular weight: Translated: 38390; Mature: 38259

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGPLNPQLEMVALDAFAVREPASRRAYTILRLRTRSGAQGYGECSRISRADLTALRGAI
CCCCCCCCEEEEEEHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHH
QGREASNFETVRRGISLSPALAGLEMAMLDALGIFANAPVYQVLGGPTRNRARALARIQG
CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCC
DTDELVAASVVRARAGGHQAFMIPVPRTGAPNHSATLVAATQQRLAAVRSAAGEGADFVL
CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEE
DAGAALTPGDASSIAAAFERAHLLWFDEPCRISNLTAAYRIAVENVTPIGFGRFADEAGV
ECCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
FQDLLRGDAIDVIRADIARQGITRIRRIAALAETYYVAVAPFHDGGPIATAAALHLAASL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHH
PNFFIQQLPTPFAEQDRDMRARLAGNSIEAVKDGFLELPRGPGLGVRVNEAALNEYREVE
HHHHHHHCCCCHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHCC
G
C
>Mature Secondary Structure 
PGPLNPQLEMVALDAFAVREPASRRAYTILRLRTRSGAQGYGECSRISRADLTALRGAI
CCCCCCCEEEEEEHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHH
QGREASNFETVRRGISLSPALAGLEMAMLDALGIFANAPVYQVLGGPTRNRARALARIQG
CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCC
DTDELVAASVVRARAGGHQAFMIPVPRTGAPNHSATLVAATQQRLAAVRSAAGEGADFVL
CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEE
DAGAALTPGDASSIAAAFERAHLLWFDEPCRISNLTAAYRIAVENVTPIGFGRFADEAGV
ECCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHH
FQDLLRGDAIDVIRADIARQGITRIRRIAALAETYYVAVAPFHDGGPIATAAALHLAASL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHH
PNFFIQQLPTPFAEQDRDMRARLAGNSIEAVKDGFLELPRGPGLGVRVNEAALNEYREVE
HHHHHHHCCCCHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA