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The map label for this gene is 116517044

Identifier: 116517044

GI number: 116517044

Start: 667032

End: 667589

Strand: Direct

Name: 116517044

Synonym: SPD_0647

Alternate gene names: NA

Gene position: 667032-667589 (Clockwise)

Preceding gene: 116516277

Following gene: 116515918

Centisome position: 32.6

GC content: 39.07

Gene sequence:

>558_bases
ATGTCTGAACGTAGAATCTCTGAAAAGTCTCTTGAAAATCTCAGAAAATCAAACCAAGAATCCAATTTATTAACCAGAGA
AGCCATTGAAACAGCCCTCTTGCAACTCTTGGAAAAAAAGGAACTGACCAAGATTAGTATTTCTGAATTGGTCAAACGTG
CAGGTGTTTCGCGTGCGGCCTTTTATCGCAATTATGACTCCAAAGAGGAAATTTTAGAGAGCGTCTTTAAACGAACTGTC
CACAATATTATGGAACAGCTGCATCATTACGATTTAAAGACAGACCTTTATTTGGTTTGGGTTCACCTTTTCCGGGAGGC
CAGAAAGGAAGCTAGAGTAATTCAATTGGCCTTGGATTACCATCTGGAAAAAATCTTTGTCCAAGCCATGCAGGAATTTC
TAGAAAAATACCATGGGAAATCAAAAGGTGTCAGCTCTTATCTTCATTCCTTCTGGAGCTCAGCCATCGTCTCTGTCCTT
CTAAAATGGATCAAGGATGGCATGAAGGTACCAGCTGAAAAGATTGCAGATTTAGGTTTACCATTTTTTAAAAAATAG

Upstream 100 bases:

>100_bases
ATACATTGACAAAGGTTCTGTCTTTTTTTACAATTATATCATGAAAACCCTTGAAACAAAAGCATCATCCGTCTGTTGTG
ACAAGTAGAAAGAAAATGTT

Downstream 100 bases:

>100_bases
AGAAAAAGGAGAAAAGAGATGACTGAAAAAAGACTGGCCTGGGATGAGTATTTTGCAGCCCAAGCTCTACTAATTGCGAA
TCGTTCCACTTGTAAACGTG

Product: transcriptional regulator, TetR family protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; TetR Family Regulatory Protein

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSERRISEKSLENLRKSNQESNLLTREAIETALLQLLEKKELTKISISELVKRAGVSRAAFYRNYDSKEEILESVFKRTV
HNIMEQLHHYDLKTDLYLVWVHLFREARKEARVIQLALDYHLEKIFVQAMQEFLEKYHGKSKGVSSYLHSFWSSAIVSVL
LKWIKDGMKVPAEKIADLGLPFFKK

Sequences:

>Translated_185_residues
MSERRISEKSLENLRKSNQESNLLTREAIETALLQLLEKKELTKISISELVKRAGVSRAAFYRNYDSKEEILESVFKRTV
HNIMEQLHHYDLKTDLYLVWVHLFREARKEARVIQLALDYHLEKIFVQAMQEFLEKYHGKSKGVSSYLHSFWSSAIVSVL
LKWIKDGMKVPAEKIADLGLPFFKK
>Mature_184_residues
SERRISEKSLENLRKSNQESNLLTREAIETALLQLLEKKELTKISISELVKRAGVSRAAFYRNYDSKEEILESVFKRTVH
NIMEQLHHYDLKTDLYLVWVHLFREARKEARVIQLALDYHLEKIFVQAMQEFLEKYHGKSKGVSSYLHSFWSSAIVSVLL
KWIKDGMKVPAEKIADLGLPFFKK

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21728; Mature: 21596

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERRISEKSLENLRKSNQESNLLTREAIETALLQLLEKKELTKISISELVKRAGVSRAA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
FYRNYDSKEEILESVFKRTVHNIMEQLHHYDLKTDLYLVWVHLFREARKEARVIQLALDY
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLEKIFVQAMQEFLEKYHGKSKGVSSYLHSFWSSAIVSVLLKWIKDGMKVPAEKIADLGL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
PFFKK
CCCCC
>Mature Secondary Structure 
SERRISEKSLENLRKSNQESNLLTREAIETALLQLLEKKELTKISISELVKRAGVSRAA
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
FYRNYDSKEEILESVFKRTVHNIMEQLHHYDLKTDLYLVWVHLFREARKEARVIQLALDY
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLEKIFVQAMQEFLEKYHGKSKGVSSYLHSFWSSAIVSVLLKWIKDGMKVPAEKIADLGL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
PFFKK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA