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The map label for this gene is rmuC [H]

Identifier: 116516808

GI number: 116516808

Start: 1774386

End: 1775642

Strand: Reverse

Name: rmuC [H]

Synonym: SPD_1778

Alternate gene names: 116516808

Gene position: 1775642-1774386 (Counterclockwise)

Preceding gene: 116516589

Following gene: 116516594

Centisome position: 86.78

GC content: 45.74

Gene sequence:

>1257_bases
ATGGAAAGTTTACTTATTCTATTATTAATTGCCAACCTAGCTGGTCTCTTTCTGATTTGGCAAAGGCAGGATAGGCAGGA
GAAACACTTAAGTAAGAGCTTGGAGGATCAGGCAGATCATTTGTCAGACCAGTTGGATTACCGCTTTGACCAAGCCAGAC
AAGCCAGCCAGTTAGACCAAAAAGATTTGGAAGTGGCTGTCAGCGACCGTTTGCAAGAAGTGCGGATTGAATTGCACCAA
GGCCTGACCCAAGTCCGTCAAGAAATGACAGATAATCTCCTCCAAACTAGAGACAAGACAGACCAACGTCTCCAAGCCTT
GCAGGAATCAAATGAGCAACGTTTGGAACAAATGCGCCAGACGGTCGAGGAAAAACTAGAAAAGACCTTGCAGACACGCT
TACAGGCTTCCTTTGAGATAGTTTCTAAACAACTGGAGTCTGTCAATCGTGGTCTTGGAGAAATGCAGACAGTTGCCCGT
GATGTCGGAGCTCTTAACAAGGTTCTCTCTGGAACCAAGACGCGAGGGATTCTGGGAGAATTGCAACTGGGGCAAATTAT
TGAAGACATCATGACACCTGCCCAGTACGAACGAGAATACGCAACGGTTGAAAACTCTAGTGAACGAGTGGAGTATGCCA
TCAAGTTACCCGGACAAGGCGACCAAGAATACGTCTATCTGCCAATTGACTCTAAGTTTCCACTGGCAGATTATTACCGC
TTGGAAGAAGCCTATGAGACAGGTGACAAGGATGAGATTGAACGCTGTCGTAAGTCACTCCTAGCAAGCGTCAAGCGCTT
TGCCAAGGATATCAAGAGCAAGTACATAGCACCGCCTCGGACAACCAATTTTGGAATCTTGTTTGTTCCGACAGAAGGTC
TTTATTCAGAGATTGTGCGCAATCCGGTCTTCTTTGATGATTTGAGACGGGAAGAACAGATTATCGTTGCAGGACCAAGT
ACCCTATCAGCCCTTCTTAACTCCCTATCAGTTGGTTTCAAGACCCTTAATATCCAAAAGAGTGCCGACCATATCAGCAA
GACTCTTGCCAGTGTCAAGACCGAGTTTGGCAAGTTTGGTGGTATTCTGGTCAAGGCACAAAAACATCTCCAACATGCCT
CTGGCAATATTGATGAATTATTAAACCGTCGTACCATAGCTATCGAGCGGACGCTCCGTCACATTGAGTTGTCAGAAGGC
GAGCCTGCGCTTGATCTACTCCATTTTCAAGAAAATGAGGAAGAATATGAAGATTAG

Upstream 100 bases:

>100_bases
AAAAAAGTGTACGCTTCTAACGAATATATAGATAGGGAAGTGTCGGTAACTTGCCCAGATGGTTATGTGGTCGTACTGCA
TAGCAAGGACAGGAGGTAGG

Downstream 100 bases:

>100_bases
TCACATGAAAAAAGATGAGCTATTTGAAGGCTTTTACCTAATCAAATCAGCTGACCTGAGGCAAACTCGAGCTGGGAAAA
ACTACCTAGCCTTTACCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MESLLILLLIANLAGLFLIWQRQDRQEKHLSKSLEDQADHLSDQLDYRFDQARQASQLDQKDLEVAVSDRLQEVRIELHQ
GLTQVRQEMTDNLLQTRDKTDQRLQALQESNEQRLEQMRQTVEEKLEKTLQTRLQASFEIVSKQLESVNRGLGEMQTVAR
DVGALNKVLSGTKTRGILGELQLGQIIEDIMTPAQYEREYATVENSSERVEYAIKLPGQGDQEYVYLPIDSKFPLADYYR
LEEAYETGDKDEIERCRKSLLASVKRFAKDIKSKYIAPPRTTNFGILFVPTEGLYSEIVRNPVFFDDLRREEQIIVAGPS
TLSALLNSLSVGFKTLNIQKSADHISKTLASVKTEFGKFGGILVKAQKHLQHASGNIDELLNRRTIAIERTLRHIELSEG
EPALDLLHFQENEEEYED

Sequences:

>Translated_418_residues
MESLLILLLIANLAGLFLIWQRQDRQEKHLSKSLEDQADHLSDQLDYRFDQARQASQLDQKDLEVAVSDRLQEVRIELHQ
GLTQVRQEMTDNLLQTRDKTDQRLQALQESNEQRLEQMRQTVEEKLEKTLQTRLQASFEIVSKQLESVNRGLGEMQTVAR
DVGALNKVLSGTKTRGILGELQLGQIIEDIMTPAQYEREYATVENSSERVEYAIKLPGQGDQEYVYLPIDSKFPLADYYR
LEEAYETGDKDEIERCRKSLLASVKRFAKDIKSKYIAPPRTTNFGILFVPTEGLYSEIVRNPVFFDDLRREEQIIVAGPS
TLSALLNSLSVGFKTLNIQKSADHISKTLASVKTEFGKFGGILVKAQKHLQHASGNIDELLNRRTIAIERTLRHIELSEG
EPALDLLHFQENEEEYED
>Mature_418_residues
MESLLILLLIANLAGLFLIWQRQDRQEKHLSKSLEDQADHLSDQLDYRFDQARQASQLDQKDLEVAVSDRLQEVRIELHQ
GLTQVRQEMTDNLLQTRDKTDQRLQALQESNEQRLEQMRQTVEEKLEKTLQTRLQASFEIVSKQLESVNRGLGEMQTVAR
DVGALNKVLSGTKTRGILGELQLGQIIEDIMTPAQYEREYATVENSSERVEYAIKLPGQGDQEYVYLPIDSKFPLADYYR
LEEAYETGDKDEIERCRKSLLASVKRFAKDIKSKYIAPPRTTNFGILFVPTEGLYSEIVRNPVFFDDLRREEQIIVAGPS
TLSALLNSLSVGFKTLNIQKSADHISKTLASVKTEFGKFGGILVKAQKHLQHASGNIDELLNRRTIAIERTLRHIELSEG
EPALDLLHFQENEEEYED

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 47892; Mature: 47892

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLLILLLIANLAGLFLIWQRQDRQEKHLSKSLEDQADHLSDQLDYRFDQARQASQLDQ
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
KDLEVAVSDRLQEVRIELHQGLTQVRQEMTDNLLQTRDKTDQRLQALQESNEQRLEQMRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TVEEKLEKTLQTRLQASFEIVSKQLESVNRGLGEMQTVARDVGALNKVLSGTKTRGILGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LQLGQIIEDIMTPAQYEREYATVENSSERVEYAIKLPGQGDQEYVYLPIDSKFPLADYYR
HHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHH
LEEAYETGDKDEIERCRKSLLASVKRFAKDIKSKYIAPPRTTNFGILFVPTEGLYSEIVR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHC
NPVFFDDLRREEQIIVAGPSTLSALLNSLSVGFKTLNIQKSADHISKTLASVKTEFGKFG
CCCHHHHHCCCCEEEEECCHHHHHHHHHHHHCHHEEECCHHHHHHHHHHHHHHHHHHHHC
GILVKAQKHLQHASGNIDELLNRRTIAIERTLRHIELSEGEPALDLLHFQENEEEYED
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MESLLILLLIANLAGLFLIWQRQDRQEKHLSKSLEDQADHLSDQLDYRFDQARQASQLDQ
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
KDLEVAVSDRLQEVRIELHQGLTQVRQEMTDNLLQTRDKTDQRLQALQESNEQRLEQMRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TVEEKLEKTLQTRLQASFEIVSKQLESVNRGLGEMQTVARDVGALNKVLSGTKTRGILGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LQLGQIIEDIMTPAQYEREYATVENSSERVEYAIKLPGQGDQEYVYLPIDSKFPLADYYR
HHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHH
LEEAYETGDKDEIERCRKSLLASVKRFAKDIKSKYIAPPRTTNFGILFVPTEGLYSEIVR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHC
NPVFFDDLRREEQIIVAGPSTLSALLNSLSVGFKTLNIQKSADHISKTLASVKTEFGKFG
CCCHHHHHCCCCEEEEECCHHHHHHHHHHHHCHHEEECCHHHHHHHHHHHHHHHHHHHHC
GILVKAQKHLQHASGNIDELLNRRTIAIERTLRHIELSEGEPALDLLHFQENEEEYED
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]