| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is ciaH
Identifier: 116516689
GI number: 116516689
Start: 715487
End: 716821
Strand: Direct
Name: ciaH
Synonym: SPD_0702
Alternate gene names: 116516689
Gene position: 715487-716821 (Clockwise)
Preceding gene: 116515465
Following gene: 116516394
Centisome position: 34.97
GC content: 38.5
Gene sequence:
>1335_bases ATGTTCAGTAAACTTAAAAAAACATGGTATGCGGATGACTTTAGTTATTTTATCCGCAACTTCGGTGTCTTCACCCTGAT TTTTTCTACAATGACTCTGATTATTTTACAAGTCATGCATTCGAGTCTTTATACTTCGGTGGACGATAAGCTTCATGGAC TGAGTGAAAATCCTCAAGCAGTTATTCAGCTGGCTATAAATAGGGCAACAGAAGAGATTAAAGATTTAGAAAATGCTAGG GCGGACGCTAGTAAAGTAGAAATAAAACCTAATGTCAGTTCCAATACGGAAGTCATTCTCTTTGATAAGGACTTTACTCA ACTTCTTTCTGGAAATCGATTTTTGGGCTTGGATAAGATTAAGTTAGAAAAGAAAGAACTAGGACATATCTACCAGATTC AGGTTTTTAATAGCTATGGGCAGGAAGAAATCTATCGTGTGATTTTGATGGAGACCAATATTAGTTCGGTTTCAACCAAT ATCAAGTATGCTGCTGTCTTGATTAATACCAGTCAGTTGGAGCAGGCTAGTCAAAAGCATGAGCAATTGATTGTGGTCGT GATGGCTAGTTTCTGGATTTTGTCTTTACTTGCCAGTCTCTATCTAGCTAGGGTCAGTGTTAGGCCCCTGCTTGAGAGTA TGCAGAAGCAACAGTCTTTTGTGGAAAATGCCAGTCATGAGTTACGAACTCCACTCGCAGTTTTGCAAAATCGCTTAGAG ACCCTTTTTCGTAAGCCAGAAGCTACCATTATGGATGTGAGCGAAAGCATTGCATCGAGTTTGGAAGAAGTCCGAAATAT GCGTTTTTTAACGACAAGCTTGCTGAACTTAGCTCGGAGAGATGATGGGATTAAGCCGGAGCTTGCAGAAGTTCCAACTA GCTTTTTTAATACAACTTTCACAAACTATGAGATGATTGCTTCGGAAAATAATCGTGTCTTCCGTTTTGAAAATCGTATC CATCGAACAATTGTCACAGATCAGCTTCTTCTGAAACAACTGATGACCATTCTTTTCGATAATGCCGTCAAGTATACTGA GGAGGATGGTGAAATTGATTTTCTTATCTCGGCGACCGATCGCAATCTTTATTTACTTGTTTCTGATAATGGAATCGGTA TTTCGACAGAAGATAAAAAGAAAATTTTTGACCGTTTTTATCGAGTAGACAAGGCTAGAACCCGGCAAAAAGGTGGTTTT GGTTTAGGATTATCCCTAGCCAAGCAAATTGTAGATGCTCTAAAAGGAACTGTTACTGTCAAAGATAATAAACCCAAGGG AACAATCTTTGAAGTGAAGATTGCCATTCAGACACCATCTAAAAAGAAAAAATAA
Upstream 100 bases:
>100_bases GTTGTCGAAGTCTATGTTTCAAAAGTCCGTAAGAAATTAAAGGGAACCACTTTTGCAGAGAATTTGCAAACCTTGCGTAG TGTTGGGTATCTTTTAAAAG
Downstream 100 bases:
>100_bases AAATATCGCTCCAATTGGGGCGATATTTTGGATTTATCTTCTACGTTTTCGTTTGATAATAGACCGTTGAACTTTTAAAA CAAGTAAGCTGAATCCGATT
Product: sensor histidine kinase CiaH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MFSKLKKTWYADDFSYFIRNFGVFTLIFSTMTLIILQVMHSSLYTSVDDKLHGLSENPQAVIQLAINRATEEIKDLENAR ADASKVEIKPNVSSNTEVILFDKDFTQLLSGNRFLGLDKIKLEKKELGHIYQIQVFNSYGQEEIYRVILMETNISSVSTN IKYAAVLINTSQLEQASQKHEQLIVVVMASFWILSLLASLYLARVSVRPLLESMQKQQSFVENASHELRTPLAVLQNRLE TLFRKPEATIMDVSESIASSLEEVRNMRFLTTSLLNLARRDDGIKPELAEVPTSFFNTTFTNYEMIASENNRVFRFENRI HRTIVTDQLLLKQLMTILFDNAVKYTEEDGEIDFLISATDRNLYLLVSDNGIGISTEDKKKIFDRFYRVDKARTRQKGGF GLGLSLAKQIVDALKGTVTVKDNKPKGTIFEVKIAIQTPSKKKK
Sequences:
>Translated_444_residues MFSKLKKTWYADDFSYFIRNFGVFTLIFSTMTLIILQVMHSSLYTSVDDKLHGLSENPQAVIQLAINRATEEIKDLENAR ADASKVEIKPNVSSNTEVILFDKDFTQLLSGNRFLGLDKIKLEKKELGHIYQIQVFNSYGQEEIYRVILMETNISSVSTN IKYAAVLINTSQLEQASQKHEQLIVVVMASFWILSLLASLYLARVSVRPLLESMQKQQSFVENASHELRTPLAVLQNRLE TLFRKPEATIMDVSESIASSLEEVRNMRFLTTSLLNLARRDDGIKPELAEVPTSFFNTTFTNYEMIASENNRVFRFENRI HRTIVTDQLLLKQLMTILFDNAVKYTEEDGEIDFLISATDRNLYLLVSDNGIGISTEDKKKIFDRFYRVDKARTRQKGGF GLGLSLAKQIVDALKGTVTVKDNKPKGTIFEVKIAIQTPSKKKK >Mature_444_residues MFSKLKKTWYADDFSYFIRNFGVFTLIFSTMTLIILQVMHSSLYTSVDDKLHGLSENPQAVIQLAINRATEEIKDLENAR ADASKVEIKPNVSSNTEVILFDKDFTQLLSGNRFLGLDKIKLEKKELGHIYQIQVFNSYGQEEIYRVILMETNISSVSTN IKYAAVLINTSQLEQASQKHEQLIVVVMASFWILSLLASLYLARVSVRPLLESMQKQQSFVENASHELRTPLAVLQNRLE TLFRKPEATIMDVSESIASSLEEVRNMRFLTTSLLNLARRDDGIKPELAEVPTSFFNTTFTNYEMIASENNRVFRFENRI HRTIVTDQLLLKQLMTILFDNAVKYTEEDGEIDFLISATDRNLYLLVSDNGIGISTEDKKKIFDRFYRVDKARTRQKGGF GLGLSLAKQIVDALKGTVTVKDNKPKGTIFEVKIAIQTPSKKKK
Specific function: Member of the two-component regulatory system CiaH/CiaR. Involved in early steps of competence regulation and in penicillin susceptibility. Probably phosphorylates CiaR
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain
Homologues:
Organism=Escherichia coli, GI1786600, Length=231, Percent_Identity=31.6017316017316, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1788393, Length=239, Percent_Identity=30.1255230125523, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1786783, Length=226, Percent_Identity=29.646017699115, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788279, Length=345, Percent_Identity=24.9275362318841, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1787894, Length=219, Percent_Identity=28.310502283105, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1789149, Length=230, Percent_Identity=27.3913043478261, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788713, Length=227, Percent_Identity=24.6696035242291, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786912, Length=287, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI145693157, Length=245, Percent_Identity=26.530612244898, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI87082128, Length=233, Percent_Identity=25.7510729613734, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787374, Length=240, Percent_Identity=28.75, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1790346, Length=235, Percent_Identity=26.8085106382979, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1790861, Length=229, Percent_Identity=24.0174672489083, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI48994928, Length=239, Percent_Identity=26.7782426778243, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CIAH_STRPN (P0A4I5)
Other databases:
- EMBL: AE005672 - PIR: G95092 - RefSeq: NP_345296.1 - ProteinModelPortal: P0A4I5 - EnsemblBacteria: EBSTRT00000026371 - GeneID: 930749 - GenomeReviews: AE005672_GR - KEGG: spn:SP_0799 - TIGR: SP_0799 - GeneTree: EBGT00050000026967 - HOGENOM: HBG532068 - OMA: IVFWLIS - ProtClustDB: CLSK876906 - BioCyc: SPNE170187-1:SP_0799-MONOMER - BRENDA: 2.7.13.3 - InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - Gene3D: G3DSA:3.30.565.10 - PRINTS: PR00344 - SMART: SM00387 - SMART: SM00388
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; SSF55874 ATP_bd_ATPase; SSF47384 His_kin_homodim
EC number: =2.7.13.3
Molecular weight: Translated: 50674; Mature: 50674
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1ae4beec)-; HASH(0x1b059128)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKLKKTWYADDFSYFIRNFGVFTLIFSTMTLIILQVMHSSLYTSVDDKLHGLSENPQA CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VIQLAINRATEEIKDLENARADASKVEIKPNVSSNTEVILFDKDFTQLLSGNRFLGLDKI HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCHHHHHHCCCCEECCHHH KLEKKELGHIYQIQVFNSYGQEEIYRVILMETNISSVSTNIKYAAVLINTSQLEQASQKH EECHHHCCCEEEEEEECCCCHHHHEEEEEEECCCHHHHCCCEEEEEEEEHHHHHHHHHHH EQLIVVVMASFWILSLLASLYLARVSVRPLLESMQKQQSFVENASHELRTPLAVLQNRLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH TLFRKPEATIMDVSESIASSLEEVRNMRFLTTSLLNLARRDDGIKPELAEVPTSFFNTTF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHCCC TNYEMIASENNRVFRFENRIHRTIVTDQLLLKQLMTILFDNAVKYTEEDGEIDFLISATD CCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEEEECC RNLYLLVSDNGIGISTEDKKKIFDRFYRVDKARTRQKGGFGLGLSLAKQIVDALKGTVTV CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEE KDNKPKGTIFEVKIAIQTPSKKKK ECCCCCCCEEEEEEEEECCCCCCH >Mature Secondary Structure MFSKLKKTWYADDFSYFIRNFGVFTLIFSTMTLIILQVMHSSLYTSVDDKLHGLSENPQA CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VIQLAINRATEEIKDLENARADASKVEIKPNVSSNTEVILFDKDFTQLLSGNRFLGLDKI HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCHHHHHHCCCCEECCHHH KLEKKELGHIYQIQVFNSYGQEEIYRVILMETNISSVSTNIKYAAVLINTSQLEQASQKH EECHHHCCCEEEEEEECCCCHHHHEEEEEEECCCHHHHCCCEEEEEEEEHHHHHHHHHHH EQLIVVVMASFWILSLLASLYLARVSVRPLLESMQKQQSFVENASHELRTPLAVLQNRLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH TLFRKPEATIMDVSESIASSLEEVRNMRFLTTSLLNLARRDDGIKPELAEVPTSFFNTTF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHCCC TNYEMIASENNRVFRFENRIHRTIVTDQLLLKQLMTILFDNAVKYTEEDGEIDFLISATD CCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCEEEEEEECC RNLYLLVSDNGIGISTEDKKKIFDRFYRVDKARTRQKGGFGLGLSLAKQIVDALKGTVTV CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEE KDNKPKGTIFEVKIAIQTPSKKKK ECCCCCCCEEEEEEEEECCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11463916