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The map label for this gene is yrrN [H]

Identifier: 116516394

GI number: 116516394

Start: 717141

End: 718211

Strand: Direct

Name: yrrN [H]

Synonym: SPD_0704

Alternate gene names: 116516394

Gene position: 717141-718211 (Clockwise)

Preceding gene: 116516689

Following gene: 116516668

Centisome position: 35.05

GC content: 40.52

Gene sequence:

>1071_bases
ATGATTCTCTCCTTAACAGTACATACCTATTTTATCATTTTTTCGGCAGAGAATTATTACAGAAAGGTTACAAAAAGAAT
AAAGTCCCTTTTCATTTTCAAAGCATGGCTGATTTTGGAGAAATGTGGTATAATTTTTCTTATGGAAAAGATTGTCATTA
CAGCAACTGCTGAAAGTATTGAACAAGTTGAACAACTACTCGAAGCTGGCGTAGACCGTATCTATGTCGGTGAGAAAGAT
TTTGGCCTTCGTCTGCCAACGACCTTTAGTTATGACCAATTACGTGAAATCGCTAAGTTGGTTCATGATGCTGGTAAGGA
ATTGCTCGTTGCGGTCAATGCTCTCATGCACCAAGATATGATGGACCGTATCAAGCCTTTCTTAGACTTCTTGGAAGAAA
TCAAGACAGACTATATTACGATTGGGGATGCAGGCGTCTTTTACGTAGTTAACCGCGATGGTTATTCATTTAAGACCATC
TACGATGCTTCAACCATGGTAACTAGCAGTCGTCAGATTAACTTCTGGGGACAAAAGGCTGGCGCATCTGAGGCTGTTTT
GGCGCGTGAAATTCCATCAGCTGAACTTTTCAAAATGCCAGAGATTTTGGAAATTCCTGCTGAAGTTTTGGTTTACGGTG
CTAGCGTCATCCATCATTCTAAACGTCCACTCTTGCAAAACTACTATAACTTTACACATATCGATGATGAAAAGACGCAT
AAACGTGACCTCTTCTTGGCTGAGCCAAGTGATCCAGAGAGCCACTATTCCATTTTTGAAGATAATCATGGGACCCATAT
CTTTGCCAACAATGACCTTGATTTGATGATCAAATTAACAGAATTGGTGGAGCATGGCTTTACTCGCTGGAAACTAGAAG
GGCTCTACACTCCTGGTCAGAACTTTGTTGAGATTGCAAAGCTCTTTATCCAAGCGCGTAGCTTGATTCAAGAGGGCAAC
TTTAGCCATGATCAAGCCTTCTTGCTAGATGAAGAAGTTCGTAAACTTCACCCTAAAAACCGTTTCCTTGATACAGGATT
TTATGACTACGATCCTGACATGGTTAGATAA

Upstream 100 bases:

>100_bases
ATCAGATTGCGCTTCAGGTGTATAAGCTTGGTAATGAGGAAGCTGCTGGTTTAATTCTTCTTGATAGTCTACCTCATAGG
ATTGTAATTTTCTTACGGGC

Downstream 100 bases:

>100_bases
AATACATGATTCGTTGAGAGAAGGAAGATGCAAACATTTCTTCTCTCAATTTTTCGTATTTCTTCACTATTTTAAAAAAA
TCAGCAGGCTAGAATGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MILSLTVHTYFIIFSAENYYRKVTKRIKSLFIFKAWLILEKCGIIFLMEKIVITATAESIEQVEQLLEAGVDRIYVGEKD
FGLRLPTTFSYDQLREIAKLVHDAGKELLVAVNALMHQDMMDRIKPFLDFLEEIKTDYITIGDAGVFYVVNRDGYSFKTI
YDASTMVTSSRQINFWGQKAGASEAVLAREIPSAELFKMPEILEIPAEVLVYGASVIHHSKRPLLQNYYNFTHIDDEKTH
KRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGFTRWKLEGLYTPGQNFVEIAKLFIQARSLIQEGN
FSHDQAFLLDEEVRKLHPKNRFLDTGFYDYDPDMVR

Sequences:

>Translated_356_residues
MILSLTVHTYFIIFSAENYYRKVTKRIKSLFIFKAWLILEKCGIIFLMEKIVITATAESIEQVEQLLEAGVDRIYVGEKD
FGLRLPTTFSYDQLREIAKLVHDAGKELLVAVNALMHQDMMDRIKPFLDFLEEIKTDYITIGDAGVFYVVNRDGYSFKTI
YDASTMVTSSRQINFWGQKAGASEAVLAREIPSAELFKMPEILEIPAEVLVYGASVIHHSKRPLLQNYYNFTHIDDEKTH
KRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGFTRWKLEGLYTPGQNFVEIAKLFIQARSLIQEGN
FSHDQAFLLDEEVRKLHPKNRFLDTGFYDYDPDMVR
>Mature_356_residues
MILSLTVHTYFIIFSAENYYRKVTKRIKSLFIFKAWLILEKCGIIFLMEKIVITATAESIEQVEQLLEAGVDRIYVGEKD
FGLRLPTTFSYDQLREIAKLVHDAGKELLVAVNALMHQDMMDRIKPFLDFLEEIKTDYITIGDAGVFYVVNRDGYSFKTI
YDASTMVTSSRQINFWGQKAGASEAVLAREIPSAELFKMPEILEIPAEVLVYGASVIHHSKRPLLQNYYNFTHIDDEKTH
KRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGFTRWKLEGLYTPGQNFVEIAKLFIQARSLIQEGN
FSHDQAFLLDEEVRKLHPKNRFLDTGFYDYDPDMVR

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 41216; Mature: 41216

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSLTVHTYFIIFSAENYYRKVTKRIKSLFIFKAWLILEKCGIIFLMEKIVITATAESI
CEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
EQVEQLLEAGVDRIYVGEKDFGLRLPTTFSYDQLREIAKLVHDAGKELLVAVNALMHQDM
HHHHHHHHCCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
MDRIKPFLDFLEEIKTDYITIGDAGVFYVVNRDGYSFKTIYDASTMVTSSRQINFWGQKA
HHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCEEEEEECCHHHEECCCEEEECCCCC
GASEAVLAREIPSAELFKMPEILEIPAEVLVYGASVIHHSKRPLLQNYYNFTHIDDEKTH
CCCHHHHHHCCCCHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCEECCCCCCC
KRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGFTRWKLEGLYTPGQ
CCCEEEECCCCCCCCCCEEECCCCCEEEECCCCEEEHHHHHHHHCCCCEEEEEEEECCCH
NFVEIAKLFIQARSLIQEGNFSHDQAFLLDEEVRKLHPKNRFLDTGFYDYDPDMVR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MILSLTVHTYFIIFSAENYYRKVTKRIKSLFIFKAWLILEKCGIIFLMEKIVITATAESI
CEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
EQVEQLLEAGVDRIYVGEKDFGLRLPTTFSYDQLREIAKLVHDAGKELLVAVNALMHQDM
HHHHHHHHCCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
MDRIKPFLDFLEEIKTDYITIGDAGVFYVVNRDGYSFKTIYDASTMVTSSRQINFWGQKA
HHHHHHHHHHHHHHCCCEEEECCCEEEEEECCCCCEEEEEECCHHHEECCCEEEECCCCC
GASEAVLAREIPSAELFKMPEILEIPAEVLVYGASVIHHSKRPLLQNYYNFTHIDDEKTH
CCCHHHHHHCCCCHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCEECCCCCCC
KRDLFLAEPSDPESHYSIFEDNHGTHIFANNDLDLMIKLTELVEHGFTRWKLEGLYTPGQ
CCCEEEECCCCCCCCCCEEECCCCCEEEECCCCEEEHHHHHHHHCCCCEEEEEEEECCCH
NFVEIAKLFIQARSLIQEGNFSHDQAFLLDEEVRKLHPKNRFLDTGFYDYDPDMVR
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]