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The map label for this gene is agaV [H]

Identifier: 116515823

GI number: 116515823

Start: 294597

End: 295088

Strand: Direct

Name: agaV [H]

Synonym: SPD_0295

Alternate gene names: 116515823

Gene position: 294597-295088 (Clockwise)

Preceding gene: 116517086

Following gene: 116515404

Centisome position: 14.4

GC content: 40.85

Gene sequence:

>492_bases
ATGACAATGCCAAATATTATTATGACCCGTATCGATGAACGGTTGATTCATGGACAAGGACAACTTTGGGTAAAATACCT
AGGTTGTAATACGGTCATTGTTGCCAATGACGAAGTAAGCACGGACAAGATGCAACAAACTCTGATGAAAACAGTTGTGC
CAGACTCAGTTGCCATGCGTTTCTTCCCTTTGCAAAAGGTGATTGATATCATTCACAAGGCTAATCCTGCTCAAACGATC
TTTATCGTTGTAAAGGATGTAAAGGACGCTTTAACCTTGGTAGAAGGTGGTGTCCCTATCAAAGAAATCAATATTGGGAA
CATTCACAATGCCCCTGGTAAAGAGCAAGTGACACGCTCCATCTTCCTGGGTGAAGAGGACAAGGCAGCCCTCAAGGAAT
TAAGCCAAACTCATCAAGTAACATTTAATACGAAAACAACTCCAACAGGAAATGATGGAGCTGTTCAAGTCAACATTATG
GACTATATTTAA

Upstream 100 bases:

>100_bases
AAAGGAGTGGATGAAGGCAATATCTGGGGTGACTACTATTACCTAGAAGCCCTTATCCGTTTCTACAAAGACTGGAACCT
ATATTGGTAGGAGGAGAAAT

Downstream 100 bases:

>100_bases
AAGAGGAGATCGTTATGTCGATTAATGTATTTCAAGCGATTTTAATTGGATTATGGACAGCTTTCTGTTTTAGTGGAATG
CTGTTAGGAATTTACACCAA

Product: PTS system, IIB component

Products: NA

Alternate protein names: EIIB-Aga'; PTS system N-acetylgalactosamine-specific EIIB component 2 [H]

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MTMPNIIMTRIDERLIHGQGQLWVKYLGCNTVIVANDEVSTDKMQQTLMKTVVPDSVAMRFFPLQKVIDIIHKANPAQTI
FIVVKDVKDALTLVEGGVPIKEINIGNIHNAPGKEQVTRSIFLGEEDKAALKELSQTHQVTFNTKTTPTGNDGAVQVNIM
DYI

Sequences:

>Translated_163_residues
MTMPNIIMTRIDERLIHGQGQLWVKYLGCNTVIVANDEVSTDKMQQTLMKTVVPDSVAMRFFPLQKVIDIIHKANPAQTI
FIVVKDVKDALTLVEGGVPIKEINIGNIHNAPGKEQVTRSIFLGEEDKAALKELSQTHQVTFNTKTTPTGNDGAVQVNIM
DYI
>Mature_162_residues
TMPNIIMTRIDERLIHGQGQLWVKYLGCNTVIVANDEVSTDKMQQTLMKTVVPDSVAMRFFPLQKVIDIIHKANPAQTIF
IVVKDVKDALTLVEGGVPIKEINIGNIHNAPGKEQVTRSIFLGEEDKAALKELSQTHQVTFNTKTTPTGNDGAVQVNIMD
YI

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG3444

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI87082217, Length=148, Percent_Identity=50, Blast_Score=144, Evalue=2e-36,
Organism=Escherichia coli, GI1789527, Length=138, Percent_Identity=39.8550724637681, Blast_Score=104, Evalue=3e-24,
Organism=Escherichia coli, GI1788120, Length=132, Percent_Identity=34.0909090909091, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004720
- InterPro:   IPR018455 [H]

Pfam domain/function: PF03830 PTSIIB_sorb [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 18101; Mature: 17970

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS51101 PTS_EIIB_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMPNIIMTRIDERLIHGQGQLWVKYLGCNTVIVANDEVSTDKMQQTLMKTVVPDSVAMR
CCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHH
FFPLQKVIDIIHKANPAQTIFIVVKDVKDALTLVEGGVPIKEINIGNIHNAPGKEQVTRS
HHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHH
IFLGEEDKAALKELSQTHQVTFNTKTTPTGNDGAVQVNIMDYI
HCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
TMPNIIMTRIDERLIHGQGQLWVKYLGCNTVIVANDEVSTDKMQQTLMKTVVPDSVAMR
CCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHH
FFPLQKVIDIIHKANPAQTIFIVVKDVKDALTLVEGGVPIKEINIGNIHNAPGKEQVTRS
HHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHH
IFLGEEDKAALKELSQTHQVTFNTKTTPTGNDGAVQVNIMDYI
HCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]