| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is ugl [H]
Identifier: 116517086
GI number: 116517086
Start: 293396
End: 294586
Strand: Direct
Name: ugl [H]
Synonym: SPD_0294
Alternate gene names: 116517086
Gene position: 293396-294586 (Clockwise)
Preceding gene: 116515558
Following gene: 116515823
Centisome position: 14.34
GC content: 41.06
Gene sequence:
>1191_bases ATGATAAAAAAGGTTACGATTGAAAAAATAAAATCGCCTGAGCGCTTCTTAGAAGTACCACTTCTGACGAAAGAAGAAGT CGGCCAGGCAATCGATAAGGTTATTCGGCAGTTAGAACTCAACCTTGACTATTTCAAGGAAGATTTCCCGACGCCAGCTA CCTTTGATAATGTCTATCCAATCATGGATAACACGGAATGGACCAATGGTTTCTGGACAGGAGAACTGTGGTTGGCTTAT GAATACAGTCAACAGGATGCATTTAAAAACATCGCTCATAAAAATGTTCTTTCTTTCCTGGATCGTGTCAATAAGAGAGT AGAATTGGATCACCATGATCTCGGCTTCTTGTACACACCGTCTTGTATGGCTGAATATAAGATAAATGGAGATGGAGAGG CTAGAGAAGCAACCTTGAAAGCTGCAGATAAGTTGATTGAACGCTATCAAGAAAAAGGTGGTTTTATTCAAGCTTGGGGA GACTTGGGCAAGAAAGAGCATTACCGTTTGATTATCGACTGCTTGCTCAATATCCAACTCTTATTCTTTGCTTATCAAGA AACAGGCGATCAAAAATACTACGATATTGCAGAAAGCCATTTCTATGCTTCAGCTAATAATGTAATCCGTGATGACGCTT CGTCCTTCCACACCTTCTATTTTGATCCTGAGACAGGTCAACCCTTTAAAGGTGTAACGAGACAAGGGTATAGTGATGAT TCATGCTGGGCACGTGGTCAATCATGGGGAGTCTATGGTATTCCTTTGACTTATCGTCACTTAAAAGACGAGTCCTGCTT TGACTTGTTTAAGGGTGTGACCAATTATTTCTTGAATCGTCTGCCAAAAGATCATGTGTCCTATTGGGATTTGATTTTTA ATGATGGTAGTGATCAATCACGAGATTCTTCAGCAACAGCTATCGCCGTCTGTGGGATTCATGAAATGCTAAAACATCTC CCAGAGGTGGATGCTGACAAAGATATTTATAAACATGCTATGCATGCCATGCTTCGTTCCTTGATCGAACATTATGCAAA TGATCAATTTACCCCTGGTGGGACAAGTCTCCTCCACGGTGTATACTCATGGCATTCAGGTAAAGGAGTGGATGAAGGCA ATATCTGGGGTGACTACTATTACCTAGAAGCCCTTATCCGTTTCTACAAAGACTGGAACCTATATTGGTAG
Upstream 100 bases:
>100_bases TGGCGGCCCAGGGCGGAGTCGTAAATGGTAAAGAATTGTTTTCAACGGATGCAGAGGAAGAGGAAGAAGATTTCGAATCG GGTATTTAAAGGGTAAAAGA
Downstream 100 bases:
>100_bases GAGGAGAAATATGACAATGCCAAATATTATTATGACCCGTATCGATGAACGGTTGATTCATGGACAAGGACAACTTTGGG TAAAATACCTAGGTTGTAAT
Product: glucuronyl hydrolase
Products: NA
Alternate protein names: UGL; Glycosaminoglycan hydrolase; Glycuronidase; Unsaturated uronic acid hydrolase [H]
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MIKKVTIEKIKSPERFLEVPLLTKEEVGQAIDKVIRQLELNLDYFKEDFPTPATFDNVYPIMDNTEWTNGFWTGELWLAY EYSQQDAFKNIAHKNVLSFLDRVNKRVELDHHDLGFLYTPSCMAEYKINGDGEAREATLKAADKLIERYQEKGGFIQAWG DLGKKEHYRLIIDCLLNIQLLFFAYQETGDQKYYDIAESHFYASANNVIRDDASSFHTFYFDPETGQPFKGVTRQGYSDD SCWARGQSWGVYGIPLTYRHLKDESCFDLFKGVTNYFLNRLPKDHVSYWDLIFNDGSDQSRDSSATAIAVCGIHEMLKHL PEVDADKDIYKHAMHAMLRSLIEHYANDQFTPGGTSLLHGVYSWHSGKGVDEGNIWGDYYYLEALIRFYKDWNLYW
Sequences:
>Translated_396_residues MIKKVTIEKIKSPERFLEVPLLTKEEVGQAIDKVIRQLELNLDYFKEDFPTPATFDNVYPIMDNTEWTNGFWTGELWLAY EYSQQDAFKNIAHKNVLSFLDRVNKRVELDHHDLGFLYTPSCMAEYKINGDGEAREATLKAADKLIERYQEKGGFIQAWG DLGKKEHYRLIIDCLLNIQLLFFAYQETGDQKYYDIAESHFYASANNVIRDDASSFHTFYFDPETGQPFKGVTRQGYSDD SCWARGQSWGVYGIPLTYRHLKDESCFDLFKGVTNYFLNRLPKDHVSYWDLIFNDGSDQSRDSSATAIAVCGIHEMLKHL PEVDADKDIYKHAMHAMLRSLIEHYANDQFTPGGTSLLHGVYSWHSGKGVDEGNIWGDYYYLEALIRFYKDWNLYW >Mature_396_residues MIKKVTIEKIKSPERFLEVPLLTKEEVGQAIDKVIRQLELNLDYFKEDFPTPATFDNVYPIMDNTEWTNGFWTGELWLAY EYSQQDAFKNIAHKNVLSFLDRVNKRVELDHHDLGFLYTPSCMAEYKINGDGEAREATLKAADKLIERYQEKGGFIQAWG DLGKKEHYRLIIDCLLNIQLLFFAYQETGDQKYYDIAESHFYASANNVIRDDASSFHTFYFDPETGQPFKGVTRQGYSDD SCWARGQSWGVYGIPLTYRHLKDESCFDLFKGVTNYFLNRLPKDHVSYWDLIFNDGSDQSRDSSATAIAVCGIHEMLKHL PEVDADKDIYKHAMHAMLRSLIEHYANDQFTPGGTSLLHGVYSWHSGKGVDEGNIWGDYYYLEALIRFYKDWNLYW
Specific function: Catalyzes the hydrolysis of oligosaccharides with unsaturated glucuronyl residues at the non-reducing terminal, to a sugar or an amino sugar, and an unsaturated D-glucuronic acid (GlcA), which is nonenzymatically converted immediately to alpha- keto acid
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 88 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010905 [H]
Pfam domain/function: PF07470 Glyco_hydro_88 [H]
EC number: NA
Molecular weight: Translated: 46079; Mature: 46079
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKVTIEKIKSPERFLEVPLLTKEEVGQAIDKVIRQLELNLDYFKEDFPTPATFDNVYP CCCCCCHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEE IMDNTEWTNGFWTGELWLAYEYSQQDAFKNIAHKNVLSFLDRVNKRVELDHHDLGFLYTP CCCCCCCCCCEEECEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECC SCMAEYKINGDGEAREATLKAADKLIERYQEKGGFIQAWGDLGKKEHYRLIIDCLLNIQL CHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCCHHHHHHHHHHHHHHHH LFFAYQETGDQKYYDIAESHFYASANNVIRDDASSFHTFYFDPETGQPFKGVTRQGYSDD HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCCCCCCHHHCCCCCCC SCWARGQSWGVYGIPLTYRHLKDESCFDLFKGVTNYFLNRLPKDHVSYWDLIFNDGSDQS HHHHCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCC RDSSATAIAVCGIHEMLKHLPEVDADKDIYKHAMHAMLRSLIEHYANDQFTPGGTSLLHG CCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VYSWHSGKGVDEGNIWGDYYYLEALIRFYKDWNLYW HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIKKVTIEKIKSPERFLEVPLLTKEEVGQAIDKVIRQLELNLDYFKEDFPTPATFDNVYP CCCCCCHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEE IMDNTEWTNGFWTGELWLAYEYSQQDAFKNIAHKNVLSFLDRVNKRVELDHHDLGFLYTP CCCCCCCCCCEEECEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECC SCMAEYKINGDGEAREATLKAADKLIERYQEKGGFIQAWGDLGKKEHYRLIIDCLLNIQL CHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCCHHHHHHHHHHHHHHHH LFFAYQETGDQKYYDIAESHFYASANNVIRDDASSFHTFYFDPETGQPFKGVTRQGYSDD HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCCCCCEEEEECCCCCCCCCHHHCCCCCCC SCWARGQSWGVYGIPLTYRHLKDESCFDLFKGVTNYFLNRLPKDHVSYWDLIFNDGSDQS HHHHCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCC RDSSATAIAVCGIHEMLKHLPEVDADKDIYKHAMHAMLRSLIEHYANDQFTPGGTSLLHG CCCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VYSWHSGKGVDEGNIWGDYYYLEALIRFYKDWNLYW HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10441389 [H]