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The map label for this gene is 116494095

Identifier: 116494095

GI number: 116494095

Start: 534216

End: 536144

Strand: Direct

Name: 116494095

Synonym: LSEI_0538

Alternate gene names: NA

Gene position: 534216-536144 (Clockwise)

Preceding gene: 116494094

Following gene: 116494096

Centisome position: 18.45

GC content: 44.32

Gene sequence:

>1929_bases
GTGAAACTGAAGAAGCTTGATTTAGATCAGCACTTTGTTTTTAAAACGCAACCTGCAGGTGGTATTGATACGCGCAACGA
ACTTTATCTGAATATGGGTGATCACTATATGACGACGATCCATATTTTTGATATTCCAGAGGAGTTCAGTGACTTTTGGC
TCACAGGTATAACTGAAATCCCTGGAGTGACAACAACGGTGGATACGGTCAATAATACTAAAGCCGATTTCGTCGACAAT
ATTGCGGAGGCTATTACGGAACTGACCGTGCAATTAGATCATGCGAAAAATATTGCCGATTCTGATGAGATTCAAAATGA
AATTGATCCGCTGCGATCATTGAGCTTAGCACTACGTAAAGACGGTGAGGTCATCAGGCAGACTTACATTCGAGTGTATT
GTTATGCAGCAACTCGTGATCAATTGGAACGTAAAGTAAACGAAGTCGTGAAGCAGATTCGCAAAATGAGCTTCAAGGCC
TCAGTCTTCCTCGGTGAAGGTATGGAAGAGTACCAGGCGATGTTTCTACCTGCTGGTGAACAGCGGTACTTGAAGAATGC
GCGCGAAGGGATTCCGCTTAGCGGTGAAGTGTTAGGCTTGAGTTTTGCGCATAATCAAACCTCTTTAAATGACCCGTTCG
GGTCTTATTTTGGCTACACGCAGACTGGTGGAACCGTCTATTGGGATCAGTTTTTAGTCGACAAACAGCGAACTTACTAC
AATCTGTTTTTGAGTGGCGACCTGGGATCAGGTAAATCAACGCAGCTCAAAAAGATTATCTGGGAGCGCGCGATTCGGAG
TGACCTAGTGCGTATTTTTGATCGATCTGGTGAATTTAGAGACACGGTACACGCCCTAGGCGGGAAGGTCGTTAGTTTAG
ATGGTCGTGATGGCACAATCAATCTGTTGCAGGTTTATCCAAGTGTGACCGTGGGTGATAGCAACGAAGTTGATCCAGTT
GGCAGCTACAAAGCTCATCTCAAGGACTTGAGTGTGAAATATCGCTTGTTTAATCACGACGCTAGCGGGCAGGAGGCACA
ATACTTCGCAACCCAATGCGACGGCTTGTATCGTCAACTAGGGCTTCTAGGGGACAGCATTGGCTTAACTCAGAAGCCTT
TTATTACGGAGCGAGATGCCAATGAGTATCCCACGCTCAGTCAACTCATTGACTTCGTTGATCAAAAACGGCAAAACCGC
ACGGACGATATGGAAAAGAAACTGCTAGATCATATCTATGTCACCCTTAACAATTTGCGGAAGACTTATGGCGAATTGTT
TGATGTGCATTCTACCTTGCCTGATTATGACGGTGAGTTGGTGGTTTCCTATGACCTTTCAGCGCTTGCGGATTCTTACC
CAGAAGAAGTACAGGACTTACAGATTTATAATGCGTTGATTTCAAGCTACAACGTTTGTATGAAACAAGGACGCATTGAA
AAGAAGGCGTTTGATGACGGTGAGCGATCGCTTGAGGATATTCACCACTTCTTATTGGTCGTTGATGAATGTCACACTTT
GTTGAACACCAACAAGGCATATGTTGCCGATTTGTTTGTCCGAATCATGTCAGAAGATCGTAAAGCCTTTGGTGCCATTT
GTTTAGCGACTCAACGGTTGGAACGGATGTTTCCTAGCGGCGATAATGCGCAAGACCGAGATACAGTTAGTGCGATTAAT
GCTCTTCGACAGATTTACACACTTTGCCAATATAAGATTGTCTTGAAGCACGATGCGACAACCATTGGAACAGAAAAGAA
TCCACGTATTTTGCGCCAGTTGTTAGGTGATATTTTGTCACCTAGCGAATTTTTACAGATTCCTAAGTTTGATAAAGGTG
AAGCCATGTTCCTGCTAGGATCTGAAAAACTGCATATGCACTTCCAGGTGACGAAGCAAGAACTTGCCGTCTTTAAGGGT
GGTGCCTAA

Upstream 100 bases:

>100_bases
TTAGCTAGGCATGCTTCAACGCTTTATACCTTTGAGCGTGCAGGACTTGCCGAAAAGGAGAAGATGTTACAAATGATGAA
TAATCCGGAGGTGAGTGTTA

Downstream 100 bases:

>100_bases
TGTGAAAACTCATAGCAAACGTTGGTTGTTGCGTTTGATCTTTGGCAGCTTAAGCAGTTTCGTGCTGTTTTTTGTTTTGT
TCATGGTCCTCATCGCAGCC

Product: Type IV secretory pathway, VirB4 component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MKLKKLDLDQHFVFKTQPAGGIDTRNELYLNMGDHYMTTIHIFDIPEEFSDFWLTGITEIPGVTTTVDTVNNTKADFVDN
IAEAITELTVQLDHAKNIADSDEIQNEIDPLRSLSLALRKDGEVIRQTYIRVYCYAATRDQLERKVNEVVKQIRKMSFKA
SVFLGEGMEEYQAMFLPAGEQRYLKNAREGIPLSGEVLGLSFAHNQTSLNDPFGSYFGYTQTGGTVYWDQFLVDKQRTYY
NLFLSGDLGSGKSTQLKKIIWERAIRSDLVRIFDRSGEFRDTVHALGGKVVSLDGRDGTINLLQVYPSVTVGDSNEVDPV
GSYKAHLKDLSVKYRLFNHDASGQEAQYFATQCDGLYRQLGLLGDSIGLTQKPFITERDANEYPTLSQLIDFVDQKRQNR
TDDMEKKLLDHIYVTLNNLRKTYGELFDVHSTLPDYDGELVVSYDLSALADSYPEEVQDLQIYNALISSYNVCMKQGRIE
KKAFDDGERSLEDIHHFLLVVDECHTLLNTNKAYVADLFVRIMSEDRKAFGAICLATQRLERMFPSGDNAQDRDTVSAIN
ALRQIYTLCQYKIVLKHDATTIGTEKNPRILRQLLGDILSPSEFLQIPKFDKGEAMFLLGSEKLHMHFQVTKQELAVFKG
GA

Sequences:

>Translated_642_residues
MKLKKLDLDQHFVFKTQPAGGIDTRNELYLNMGDHYMTTIHIFDIPEEFSDFWLTGITEIPGVTTTVDTVNNTKADFVDN
IAEAITELTVQLDHAKNIADSDEIQNEIDPLRSLSLALRKDGEVIRQTYIRVYCYAATRDQLERKVNEVVKQIRKMSFKA
SVFLGEGMEEYQAMFLPAGEQRYLKNAREGIPLSGEVLGLSFAHNQTSLNDPFGSYFGYTQTGGTVYWDQFLVDKQRTYY
NLFLSGDLGSGKSTQLKKIIWERAIRSDLVRIFDRSGEFRDTVHALGGKVVSLDGRDGTINLLQVYPSVTVGDSNEVDPV
GSYKAHLKDLSVKYRLFNHDASGQEAQYFATQCDGLYRQLGLLGDSIGLTQKPFITERDANEYPTLSQLIDFVDQKRQNR
TDDMEKKLLDHIYVTLNNLRKTYGELFDVHSTLPDYDGELVVSYDLSALADSYPEEVQDLQIYNALISSYNVCMKQGRIE
KKAFDDGERSLEDIHHFLLVVDECHTLLNTNKAYVADLFVRIMSEDRKAFGAICLATQRLERMFPSGDNAQDRDTVSAIN
ALRQIYTLCQYKIVLKHDATTIGTEKNPRILRQLLGDILSPSEFLQIPKFDKGEAMFLLGSEKLHMHFQVTKQELAVFKG
GA
>Mature_642_residues
MKLKKLDLDQHFVFKTQPAGGIDTRNELYLNMGDHYMTTIHIFDIPEEFSDFWLTGITEIPGVTTTVDTVNNTKADFVDN
IAEAITELTVQLDHAKNIADSDEIQNEIDPLRSLSLALRKDGEVIRQTYIRVYCYAATRDQLERKVNEVVKQIRKMSFKA
SVFLGEGMEEYQAMFLPAGEQRYLKNAREGIPLSGEVLGLSFAHNQTSLNDPFGSYFGYTQTGGTVYWDQFLVDKQRTYY
NLFLSGDLGSGKSTQLKKIIWERAIRSDLVRIFDRSGEFRDTVHALGGKVVSLDGRDGTINLLQVYPSVTVGDSNEVDPV
GSYKAHLKDLSVKYRLFNHDASGQEAQYFATQCDGLYRQLGLLGDSIGLTQKPFITERDANEYPTLSQLIDFVDQKRQNR
TDDMEKKLLDHIYVTLNNLRKTYGELFDVHSTLPDYDGELVVSYDLSALADSYPEEVQDLQIYNALISSYNVCMKQGRIE
KKAFDDGERSLEDIHHFLLVVDECHTLLNTNKAYVADLFVRIMSEDRKAFGAICLATQRLERMFPSGDNAQDRDTVSAIN
ALRQIYTLCQYKIVLKHDATTIGTEKNPRILRQLLGDILSPSEFLQIPKFDKGEAMFLLGSEKLHMHFQVTKQELAVFKG
GA

Specific function: Unknown

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72895; Mature: 72895

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKKLDLDQHFVFKTQPAGGIDTRNELYLNMGDHYMTTIHIFDIPEEFSDFWLTGITEI
CCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEECCHHHHHHHHHCHHHC
PGVTTTVDTVNNTKADFVDNIAEAITELTVQLDHAKNIADSDEIQNEIDPLRSLSLALRK
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
DGEVIRQTYIRVYCYAATRDQLERKVNEVVKQIRKMSFKASVFLGEGMEEYQAMFLPAGE
CHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCCCCH
QRYLKNAREGIPLSGEVLGLSFAHNQTSLNDPFGSYFGYTQTGGTVYWDQFLVDKQRTYY
HHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCEEEEHHHHHHCCCEEE
NLFLSGDLGSGKSTQLKKIIWERAIRSDLVRIFDRSGEFRDTVHALGGKVVSLDGRDGTI
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCEE
NLLQVYPSVTVGDSNEVDPVGSYKAHLKDLSVKYRLFNHDASGQEAQYFATQCDGLYRQL
EEEEECCCEEECCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
GLLGDSIGLTQKPFITERDANEYPTLSQLIDFVDQKRQNRTDDMEKKLLDHIYVTLNNLR
HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KTYGELFDVHSTLPDYDGELVVSYDLSALADSYPEEVQDLQIYNALISSYNVCMKQGRIE
HHHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
KKAFDDGERSLEDIHHFLLVVDECHTLLNTNKAYVADLFVRIMSEDRKAFGAICLATQRL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERMFPSGDNAQDRDTVSAINALRQIYTLCQYKIVLKHDATTIGTEKNPRILRQLLGDILS
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHCC
PSEFLQIPKFDKGEAMFLLGSEKLHMHFQVTKQELAVFKGGA
CHHHHCCCCCCCCCEEEEECCCEEEEEEEEEHHHHHHHCCCC
>Mature Secondary Structure
MKLKKLDLDQHFVFKTQPAGGIDTRNELYLNMGDHYMTTIHIFDIPEEFSDFWLTGITEI
CCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEECCHHHHHHHHHCHHHC
PGVTTTVDTVNNTKADFVDNIAEAITELTVQLDHAKNIADSDEIQNEIDPLRSLSLALRK
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
DGEVIRQTYIRVYCYAATRDQLERKVNEVVKQIRKMSFKASVFLGEGMEEYQAMFLPAGE
CHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCCCCH
QRYLKNAREGIPLSGEVLGLSFAHNQTSLNDPFGSYFGYTQTGGTVYWDQFLVDKQRTYY
HHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCEEEEHHHHHHCCCEEE
NLFLSGDLGSGKSTQLKKIIWERAIRSDLVRIFDRSGEFRDTVHALGGKVVSLDGRDGTI
EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCEE
NLLQVYPSVTVGDSNEVDPVGSYKAHLKDLSVKYRLFNHDASGQEAQYFATQCDGLYRQL
EEEEECCCEEECCCCCCCCCCHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
GLLGDSIGLTQKPFITERDANEYPTLSQLIDFVDQKRQNRTDDMEKKLLDHIYVTLNNLR
HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KTYGELFDVHSTLPDYDGELVVSYDLSALADSYPEEVQDLQIYNALISSYNVCMKQGRIE
HHHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
KKAFDDGERSLEDIHHFLLVVDECHTLLNTNKAYVADLFVRIMSEDRKAFGAICLATQRL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERMFPSGDNAQDRDTVSAINALRQIYTLCQYKIVLKHDATTIGTEKNPRILRQLLGDILS
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHCC
PSEFLQIPKFDKGEAMFLLGSEKLHMHFQVTKQELAVFKGGA
CHHHHCCCCCCCCCEEEEECCCEEEEEEEEEHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10475962; 12004073 [H]