| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492887
Identifier: 116492887
GI number: 116492887
Start: 1124805
End: 1125068
Strand: Reverse
Name: 116492887
Synonym: PEPE_1125
Alternate gene names: NA
Gene position: 1125068-1124805 (Counterclockwise)
Preceding gene: 116492889
Following gene: 116492886
Centisome position: 61.4
GC content: 32.2
Gene sequence:
>264_bases ATGATGACGCCAGGAAGTGTTTATGTTTTTAAATTTGGCAAAGATGAACTTAATAATCGAGCAATTATTAATTACACCCA TACATGGACGGGTCGAATTAAAATTACTGAGATTGATTTACGTCTGCATGAACAAAAGCATCCTCGTATCTTTCGTCGAG AAAGTGATTTATTAGCTTATTTAAAGAAACATCTAACGGAAACTGATGGAGTTACTAACATAACACGCCGTAAAAAACAT CATTCCAAAAAAATAAAAAAGTAA
Upstream 100 bases:
>100_bases TTAAAAGAAAAATTAGTCGAGGTGATCAACAATTCTAAAGAAAACAAAACAATTTTTGAGAAGCAATAATCTACAATATA GTAAGAAATATATCCGGCCG
Downstream 100 bases:
>100_bases ATTGACTATTGACGCCATTAAGTTTTATGCGTAGTATAGTCAATTAAAGAAAAGAAACCTTAATTTGGTCCTGTGAGGCC AAAAGGCTCAATTTGTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MMTPGSVYVFKFGKDELNNRAIINYTHTWTGRIKITEIDLRLHEQKHPRIFRRESDLLAYLKKHLTETDGVTNITRRKKH HSKKIKK
Sequences:
>Translated_87_residues MMTPGSVYVFKFGKDELNNRAIINYTHTWTGRIKITEIDLRLHEQKHPRIFRRESDLLAYLKKHLTETDGVTNITRRKKH HSKKIKK >Mature_87_residues MMTPGSVYVFKFGKDELNNRAIINYTHTWTGRIKITEIDLRLHEQKHPRIFRRESDLLAYLKKHLTETDGVTNITRRKKH HSKKIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10429; Mature: 10429
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: PS00591 GLYCOSYL_HYDROL_F10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTPGSVYVFKFGKDELNNRAIINYTHTWTGRIKITEIDLRLHEQKHPRIFRRESDLLAY CCCCCCEEEEEECCCCCCCCEEEEEECEEECEEEEEEEEEEECCCCCCCEECCHHHHHHH LKKHLTETDGVTNITRRKKHHSKKIKK HHHHCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MMTPGSVYVFKFGKDELNNRAIINYTHTWTGRIKITEIDLRLHEQKHPRIFRRESDLLAY CCCCCCEEEEEECCCCCCCCEEEEEECEEECEEEEEEEEEEECCCCCCCEECCHHHHHHH LKKHLTETDGVTNITRRKKHHSKKIKK HHHHCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA