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The map label for this gene is yitL [H]

Identifier: 116492851

GI number: 116492851

Start: 1084192

End: 1085058

Strand: Reverse

Name: yitL [H]

Synonym: PEPE_1089

Alternate gene names: 116492851

Gene position: 1085058-1084192 (Counterclockwise)

Preceding gene: 116492852

Following gene: 116492850

Centisome position: 59.22

GC content: 36.91

Gene sequence:

>867_bases
ATGGATACACTATTAGGAAAAGTCGAAAAAGGTAAAGTTATTGATGAAAATGATGATTATTATTTTGTTCAATTGTCAGA
TGGAAATGCCTATCGACTTGATAAAAAAGAAATTAAAAAACCACTGAAGAAGGGTAGTTTCTTTACTGGATTTACTTATG
AAAATGCAGATCATGACCGCCAAATAACACGTGAGACGCCACGAGCAACTGCTGGTAAATATGGTTGGGGAACGGTTGTT
AAAACGCGTAAAGATTTAGGAGTCTTCGTTGACATTGGTTTACCTAATAAAGATATTGTTATTTCGTTAGATGAATTACC
AACAGAAACAAGTATCTGGCCGCATACTAATGATCGTATTTTAGTTTGTCTGTCTGTAGACAAAAAGGAAAGAATGTGGG
CACATCCAGCTGACTATGATGTTTTTAAGGCAATTTCTGCTCGAGCAGATAAAACAATGATTAATAAAAATGTTAATGCA
ACGGCTTTCCGGTTAAAGATGGCTGGTTCTTTGGTATTGACTGATAACTTTTTGTTAGGATTTATCCATGCTTCCGAACG
AGATCGAGAACCACGATTGGGCGAACAATTAAATGCACGGGTAATCGGGGTTCATCCAGATGGAACGTTAAATTTATCAT
TAAAACCTAGGAATTATGAGGCTCTAGGTGATGATGCAGCAATGGTTTTAGCCATGCTACAACATACCCGAGACCAAACG
CTACCATTTAATGATCATAGCAAACCAGATGCGATTAAAGAACGTTTTGGTATTAGTAAAGGACGTTTCAAAATGGCATT
GGGACATTTGCTTAAGGCTGGTGTAATCCAACAAACTGAAGATGGGATTGTTTTAAAGGAGAAATAG

Upstream 100 bases:

>100_bases
TGAATGGCATTGCAGCTGGACCAATCATTGCGTCAGGAATTGCGTATTTGATTATTCAACTTTTACAAATTCAAATTAAA
TAAAAATGGGTGAAATAAAT

Downstream 100 bases:

>100_bases
TCATGAATGATTTAATCAATGACTATTTACATTCTCTTAAAGTAGAGCGAGGCTTATCTGATAATACAATTATTAGTTAC
CGCCAAGAATTACGTCACTT

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MDTLLGKVEKGKVIDENDDYYFVQLSDGNAYRLDKKEIKKPLKKGSFFTGFTYENADHDRQITRETPRATAGKYGWGTVV
KTRKDLGVFVDIGLPNKDIVISLDELPTETSIWPHTNDRILVCLSVDKKERMWAHPADYDVFKAISARADKTMINKNVNA
TAFRLKMAGSLVLTDNFLLGFIHASERDREPRLGEQLNARVIGVHPDGTLNLSLKPRNYEALGDDAAMVLAMLQHTRDQT
LPFNDHSKPDAIKERFGISKGRFKMALGHLLKAGVIQQTEDGIVLKEK

Sequences:

>Translated_288_residues
MDTLLGKVEKGKVIDENDDYYFVQLSDGNAYRLDKKEIKKPLKKGSFFTGFTYENADHDRQITRETPRATAGKYGWGTVV
KTRKDLGVFVDIGLPNKDIVISLDELPTETSIWPHTNDRILVCLSVDKKERMWAHPADYDVFKAISARADKTMINKNVNA
TAFRLKMAGSLVLTDNFLLGFIHASERDREPRLGEQLNARVIGVHPDGTLNLSLKPRNYEALGDDAAMVLAMLQHTRDQT
LPFNDHSKPDAIKERFGISKGRFKMALGHLLKAGVIQQTEDGIVLKEK
>Mature_288_residues
MDTLLGKVEKGKVIDENDDYYFVQLSDGNAYRLDKKEIKKPLKKGSFFTGFTYENADHDRQITRETPRATAGKYGWGTVV
KTRKDLGVFVDIGLPNKDIVISLDELPTETSIWPHTNDRILVCLSVDKKERMWAHPADYDVFKAISARADKTMINKNVNA
TAFRLKMAGSLVLTDNFLLGFIHASERDREPRLGEQLNARVIGVHPDGTLNLSLKPRNYEALGDDAAMVLAMLQHTRDQT
LPFNDHSKPDAIKERFGISKGRFKMALGHLLKAGVIQQTEDGIVLKEK

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32443; Mature: 32443

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLLGKVEKGKVIDENDDYYFVQLSDGNAYRLDKKEIKKPLKKGSFFTGFTYENADHDR
CCCHHCCCCCCCEEECCCCEEEEEECCCCEEEECHHHHHHHHHCCCEEEEEEECCCCCCC
QITRETPRATAGKYGWGTVVKTRKDLGVFVDIGLPNKDIVISLDELPTETSIWPHTNDRI
HHHHCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCE
LVCLSVDKKERMWAHPADYDVFKAISARADKTMINKNVNATAFRLKMAGSLVLTDNFLLG
EEEEECCCCHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCCEEEEEEECCEEEEECCEEEE
FIHASERDREPRLGEQLNARVIGVHPDGTLNLSLKPRNYEALGDDAAMVLAMLQHTRDQT
EEECCCCCCCCCCCHHHCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC
LPFNDHSKPDAIKERFGISKGRFKMALGHLLKAGVIQQTEDGIVLKEK
CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCEEEECC
>Mature Secondary Structure
MDTLLGKVEKGKVIDENDDYYFVQLSDGNAYRLDKKEIKKPLKKGSFFTGFTYENADHDR
CCCHHCCCCCCCEEECCCCEEEEEECCCCEEEECHHHHHHHHHCCCEEEEEEECCCCCCC
QITRETPRATAGKYGWGTVVKTRKDLGVFVDIGLPNKDIVISLDELPTETSIWPHTNDRI
HHHHCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCE
LVCLSVDKKERMWAHPADYDVFKAISARADKTMINKNVNATAFRLKMAGSLVLTDNFLLG
EEEEECCCCHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCCEEEEEEECCEEEEECCEEEE
FIHASERDREPRLGEQLNARVIGVHPDGTLNLSLKPRNYEALGDDAAMVLAMLQHTRDQT
EEECCCCCCCCCCCHHHCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC
LPFNDHSKPDAIKERFGISKGRFKMALGHLLKAGVIQQTEDGIVLKEK
CCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]