Click here to switch to the map view.

The map label for this gene is yeaL [C]

Identifier: 116492852

GI number: 116492852

Start: 1085076

End: 1085534

Strand: Reverse

Name: yeaL [C]

Synonym: PEPE_1090

Alternate gene names: 116492852

Gene position: 1085534-1085076 (Counterclockwise)

Preceding gene: 116492854

Following gene: 116492851

Centisome position: 59.24

GC content: 34.2

Gene sequence:

>459_bases
ATGGAGAGTTGGCTATTTTTGATTGGAATCTTTATTGTGGCGTTATTAGGCAAAAATCAATCATTAATTATCGCTAGTAT
TGTAGTACTATTTTTAAAATTAATACCGTACTCAGATAAAATTTTTCCTTTATTAAATAAACAAGGAATAAACTGGGGGG
TTACGATTATTTCAATTACCATTTTAGTTCCAATAGCAACTGGGAAGATTGGTTTTATGGATTTAGTTAATTCATTTAAA
TCACCGGTGGGCTGGATAGCAGTAGCTTGTGGCATCTTGGTCTCACTATTGTCGTACCAAGGAGTAGGCTTCTTATCAGC
TAGTCCAGAAGTGACAGTTGCTTTAGTAATGGGAACTATCATTGGGGTAGTGTTTATGAATGGCATTGCAGCTGGACCAA
TCATTGCGTCAGGAATTGCGTATTTGATTATTCAACTTTTACAAATTCAAATTAAATAA

Upstream 100 bases:

>100_bases
TAATTGTAGTGTTGGTCCTTAAGGAACCCTGATATATTGATGTCGGTTCTATGGACTAATGTACATATATTATGTAAACT
AGAAATTGGAGTGGAATTTA

Downstream 100 bases:

>100_bases
AAATGGGTGAAATAAATATGGATACACTATTAGGAAAAGTCGAAAAAGGTAAAGTTATTGATGAAAATGATGATTATTAT
TTTGTTCAATTGTCAGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MESWLFLIGIFIVALLGKNQSLIIASIVVLFLKLIPYSDKIFPLLNKQGINWGVTIISITILVPIATGKIGFMDLVNSFK
SPVGWIAVACGILVSLLSYQGVGFLSASPEVTVALVMGTIIGVVFMNGIAAGPIIASGIAYLIIQLLQIQIK

Sequences:

>Translated_152_residues
MESWLFLIGIFIVALLGKNQSLIIASIVVLFLKLIPYSDKIFPLLNKQGINWGVTIISITILVPIATGKIGFMDLVNSFK
SPVGWIAVACGILVSLLSYQGVGFLSASPEVTVALVMGTIIGVVFMNGIAAGPIIASGIAYLIIQLLQIQIK
>Mature_152_residues
MESWLFLIGIFIVALLGKNQSLIIASIVVLFLKLIPYSDKIFPLLNKQGINWGVTIISITILVPIATGKIGFMDLVNSFK
SPVGWIAVACGILVSLLSYQGVGFLSASPEVTVALVMGTIIGVVFMNGIAAGPIIASGIAYLIIQLLQIQIK

Specific function: Unknown

COG id: COG2707

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0756 family

Homologues:

Organism=Escherichia coli, GI1788090, Length=127, Percent_Identity=32.2834645669291, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1090_PEDPA (Q03F77)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_804587.1
- STRING:   Q03F77
- GeneID:   4417025
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_1090
- eggNOG:   COG2707
- HOGENOM:   HBG615456
- OMA:   VIKITPL
- ProtClustDB:   CLSK870236
- BioCyc:   PPEN278197:PEPE_1090-MONOMER
- HAMAP:   MF_01874
- InterPro:   IPR007382
- ProDom:   PD021096

Pfam domain/function: PF04284 DUF441

EC number: NA

Molecular weight: Translated: 16173; Mature: 16173

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1726a2dc)-; HASH(0x413e3e44)-; HASH(0x1730e3e8)-; HASH(0x17cd4d04)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESWLFLIGIFIVALLGKNQSLIIASIVVLFLKLIPYSDKIFPLLNKQGINWGVTIISIT
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHH
ILVPIATGKIGFMDLVNSFKSPVGWIAVACGILVSLLSYQGVGFLSASPEVTVALVMGTI
HHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHH
IGVVFMNGIAAGPIIASGIAYLIIQLLQIQIK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MESWLFLIGIFIVALLGKNQSLIIASIVVLFLKLIPYSDKIFPLLNKQGINWGVTIISIT
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHH
ILVPIATGKIGFMDLVNSFKSPVGWIAVACGILVSLLSYQGVGFLSASPEVTVALVMGTI
HHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHH
IGVVFMNGIAAGPIIASGIAYLIIQLLQIQIK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA