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The map label for this gene is 116492770

Identifier: 116492770

GI number: 116492770

Start: 1016535

End: 1017044

Strand: Reverse

Name: 116492770

Synonym: PEPE_1007

Alternate gene names: NA

Gene position: 1017044-1016535 (Counterclockwise)

Preceding gene: 116492771

Following gene: 116492769

Centisome position: 55.5

GC content: 44.51

Gene sequence:

>510_bases
ATGCCGAGAGTTAGAAGATGTAGACAACTAGGATGCCATGCGATGGTCACTTTCCCTGACCACTATTGTCAGCAGCACTA
TGAGCATGAAGCTGAGTATTTGGCCAGTCGGCAACGTTGGGCACGCAGCAATGACAAACAATACACACACAAGTACAACA
CTGTTATACGTTATCGTAATGAGGACAAGCGTCAGCAATACAACTTCTATCGGACAAGGCAATGGTCACATCTAAGGCAA
CGAGTCTTGGAGCGTGACCATTACTTATGTGCTTACTGTAAAGTGCAAGGCACTATCATGCCTGCTAAGACAGTGGATCA
TATTGTGCCAATTGAGTTTGATGAAACATTGAAAGCTAGCGTTGATAACTTAGCTGTAATCTGTGGGAGTTGCCATCGTG
CTAAGACGGACTGGGAACAATCATACTATGGCACAGGCCAAGGCAATGAGCTGCAAAGCGTAACACCAATCAATGATGTA
TCGTCAATCGTTGTGCTAATGAACAATTGA

Upstream 100 bases:

>100_bases
TGGCTAGTTGTAGGGTGCAAATCCTTACCATCTCGTAGTTATAACATTAAAGTCACATAACTTAATTGTTGTGTGGCTTT
TTATTTTGGAGGTGTAGACA

Downstream 100 bases:

>100_bases
TTTAAAGACGCCTGTCGTTCGATTTAAGCGACTTTAAATTTTTAAGTATAATTGGTCACAACGATAATTAAAACAAACCC
CGCCCCCTTATACGACCAAG

Product: restriction endonuclease

Products: NA

Alternate protein names: HNH Endonuclease; Restriction Endonuclease; Phage HNH Endonuclease Family

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MPRVRRCRQLGCHAMVTFPDHYCQQHYEHEAEYLASRQRWARSNDKQYTHKYNTVIRYRNEDKRQQYNFYRTRQWSHLRQ
RVLERDHYLCAYCKVQGTIMPAKTVDHIVPIEFDETLKASVDNLAVICGSCHRAKTDWEQSYYGTGQGNELQSVTPINDV
SSIVVLMNN

Sequences:

>Translated_169_residues
MPRVRRCRQLGCHAMVTFPDHYCQQHYEHEAEYLASRQRWARSNDKQYTHKYNTVIRYRNEDKRQQYNFYRTRQWSHLRQ
RVLERDHYLCAYCKVQGTIMPAKTVDHIVPIEFDETLKASVDNLAVICGSCHRAKTDWEQSYYGTGQGNELQSVTPINDV
SSIVVLMNN
>Mature_168_residues
PRVRRCRQLGCHAMVTFPDHYCQQHYEHEAEYLASRQRWARSNDKQYTHKYNTVIRYRNEDKRQQYNFYRTRQWSHLRQR
VLERDHYLCAYCKVQGTIMPAKTVDHIVPIEFDETLKASVDNLAVICGSCHRAKTDWEQSYYGTGQGNELQSVTPINDVS
SIVVLMNN

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20106; Mature: 19975

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVRRCRQLGCHAMVTFPDHYCQQHYEHEAEYLASRQRWARSNDKQYTHKYNTVIRYRN
CCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECC
EDKRQQYNFYRTRQWSHLRQRVLERDHYLCAYCKVQGTIMPAKTVDHIVPIEFDETLKAS
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECEEECCHHHCCCCCCCCCHHHHHH
VDNLAVICGSCHRAKTDWEQSYYGTGQGNELQSVTPINDVSSIVVLMNN
HHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
PRVRRCRQLGCHAMVTFPDHYCQQHYEHEAEYLASRQRWARSNDKQYTHKYNTVIRYRN
CHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECC
EDKRQQYNFYRTRQWSHLRQRVLERDHYLCAYCKVQGTIMPAKTVDHIVPIEFDETLKAS
CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECEEECCHHHCCCCCCCCCHHHHHH
VDNLAVICGSCHRAKTDWEQSYYGTGQGNELQSVTPINDVSSIVVLMNN
HHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA