| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492771
Identifier: 116492771
GI number: 116492771
Start: 1017582
End: 1018013
Strand: Reverse
Name: 116492771
Synonym: PEPE_1008
Alternate gene names: NA
Gene position: 1018013-1017582 (Counterclockwise)
Preceding gene: 116492772
Following gene: 116492770
Centisome position: 55.56
GC content: 38.19
Gene sequence:
>432_bases GTGCCATTAATACCAGAACTGGACGAGAAAAAGACTATCAAGAATGTTAAATACTTTTTTGAAGTAGAGTTCCCAGCAAT CCAGAATATGGCACATGTAGCTTATGTTGATATAAAATCGCCAGTAATTAGTGGTATGCCTTCAGTACATGGAGTAGACA ATAGCAATGAAGAGAAGCTCACAGCACATGCTCAAGCTAAGGACTTACTAGCTAAGGTATTACAGTCATGCTCAGGACTA GATAGAGAACATCGACACGTGTTGGAACTACGCTACTTCAAAAAGCTAAGCTGGACAGCGATTGAAGATTTAACTGGTTA CAATAACACGCATAATTGGGAACGATGCAATGAAGCTTTATTACAATTTTCGTGGGCATTTGCGGACGTTGAAGATTTAA GAGTATTCAAAGATAGCCAAAAAAACGAATAA
Upstream 100 bases:
>100_bases CTGAGATATGTAAGAAAATGAATCATTGCAAAGCTTATATTACTAAGCTGGCTAAAGAGTTTAATATTAAAACACATGCA AAAAAGAGAGGTAGAAAATC
Downstream 100 bases:
>100_bases AATCGGAATGAAATGCTAATAAGGTTCGCTTTATATTAGTATTATCGAAAGAATTGATAAATAGCCACAACATATAAAAC TAATAAACGAAACTAATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPLIPELDEKKTIKNVKYFFEVEFPAIQNMAHVAYVDIKSPVISGMPSVHGVDNSNEEKLTAHAQAKDLLAKVLQSCSGL DREHRHVLELRYFKKLSWTAIEDLTGYNNTHNWERCNEALLQFSWAFADVEDLRVFKDSQKNE
Sequences:
>Translated_143_residues MPLIPELDEKKTIKNVKYFFEVEFPAIQNMAHVAYVDIKSPVISGMPSVHGVDNSNEEKLTAHAQAKDLLAKVLQSCSGL DREHRHVLELRYFKKLSWTAIEDLTGYNNTHNWERCNEALLQFSWAFADVEDLRVFKDSQKNE >Mature_142_residues PLIPELDEKKTIKNVKYFFEVEFPAIQNMAHVAYVDIKSPVISGMPSVHGVDNSNEEKLTAHAQAKDLLAKVLQSCSGLD REHRHVLELRYFKKLSWTAIEDLTGYNNTHNWERCNEALLQFSWAFADVEDLRVFKDSQKNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16522; Mature: 16391
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIPELDEKKTIKNVKYFFEVEFPAIQNMAHVAYVDIKSPVISGMPSVHGVDNSNEEKL CCCCCCCCCHHHHHHHEEEEEECCHHHHCHHHHEEEECCCHHHHCCCCCCCCCCCCCHHH TAHAQAKDLLAKVLQSCSGLDREHRHVLELRYFKKLSWTAIEDLTGYNNTHNWERCNEAL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LQFSWAFADVEDLRVFKDSQKNE HHHHHHHCCHHHHHHHHCCCCCC >Mature Secondary Structure PLIPELDEKKTIKNVKYFFEVEFPAIQNMAHVAYVDIKSPVISGMPSVHGVDNSNEEKL CCCCCCCCHHHHHHHEEEEEECCHHHHCHHHHEEEECCCHHHHCCCCCCCCCCCCCHHH TAHAQAKDLLAKVLQSCSGLDREHRHVLELRYFKKLSWTAIEDLTGYNNTHNWERCNEAL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LQFSWAFADVEDLRVFKDSQKNE HHHHHHHCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA