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The map label for this gene is 116492769

Identifier: 116492769

GI number: 116492769

Start: 1015880

End: 1016338

Strand: Reverse

Name: 116492769

Synonym: PEPE_1006

Alternate gene names: NA

Gene position: 1016338-1015880 (Counterclockwise)

Preceding gene: 116492770

Following gene: 116492768

Centisome position: 55.47

GC content: 42.27

Gene sequence:

>459_bases
ATGAAAAAAGTGGATAAAGACGTTAACGGCGGGCAATTATCACGTACACCACCGGCTTACTTAGGCCGGCAGGCTAAGGT
CGTTTGGCGTCGATTAGTTCCCTTTTTAGAAGACAATACCCCGGTTAAGCGCATTGATAGCGGGCTTGTAGAGCAATATG
CTTCCCAATACGAGATTTATCGCAATGCGTATAAACATATTCAGGAAAACGGTGAAGTCCAAGAAATCTATAAAACGTTA
CAAGATCAGACCGGCAAAATAATTGGTCGAGACTTCGTGGGCTACAAACGTAATCCTATGACTCAAATTTACGACTCAGC
GGTTAAAAATCTGACTAAACTAGGCGCTGAACTGGGATTGTCGCCAAAATCTCGTAGTGATTTAATCAAGTTAAACTTAG
ATGACCACAAAGACGAGCGAAGCGTCGCTGATCGTATGAAAGAATTTTTAGGAGGATAA

Upstream 100 bases:

>100_bases
CAAGGAAGAGCACACACATAGCAGTTTTCTTGTGATAGAAACAATTTTTGAAAATTTTTAGGTAGGGGGGGTCACCAAAT
AATGAAAGGAGGCATATAAA

Downstream 100 bases:

>100_bases
TAATGAAGGTTGATTTAACACAAACACATGATGTTATTGGAGCTTATCAAGCATTGGACTGCTCAGCGATTCGCCAACAA
TATACAGACGCAGGAACTCA

Product: Phage terminase, small subunit

Products: NA

Alternate protein names: P27 Family Phage Terminase Small Subunit; Phage Terminase; Terminase Small Subunit

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKKVDKDVNGGQLSRTPPAYLGRQAKVVWRRLVPFLEDNTPVKRIDSGLVEQYASQYEIYRNAYKHIQENGEVQEIYKTL
QDQTGKIIGRDFVGYKRNPMTQIYDSAVKNLTKLGAELGLSPKSRSDLIKLNLDDHKDERSVADRMKEFLGG

Sequences:

>Translated_152_residues
MKKVDKDVNGGQLSRTPPAYLGRQAKVVWRRLVPFLEDNTPVKRIDSGLVEQYASQYEIYRNAYKHIQENGEVQEIYKTL
QDQTGKIIGRDFVGYKRNPMTQIYDSAVKNLTKLGAELGLSPKSRSDLIKLNLDDHKDERSVADRMKEFLGG
>Mature_152_residues
MKKVDKDVNGGQLSRTPPAYLGRQAKVVWRRLVPFLEDNTPVKRIDSGLVEQYASQYEIYRNAYKHIQENGEVQEIYKTL
QDQTGKIIGRDFVGYKRNPMTQIYDSAVKNLTKLGAELGLSPKSRSDLIKLNLDDHKDERSVADRMKEFLGG

Specific function: Unknown

COG id: COG3747

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17403; Mature: 17403

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVDKDVNGGQLSRTPPAYLGRQAKVVWRRLVPFLEDNTPVKRIDSGLVEQYASQYEIY
CCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RNAYKHIQENGEVQEIYKTLQDQTGKIIGRDFVGYKRNPMTQIYDSAVKNLTKLGAELGL
HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
SPKSRSDLIKLNLDDHKDERSVADRMKEFLGG
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKVDKDVNGGQLSRTPPAYLGRQAKVVWRRLVPFLEDNTPVKRIDSGLVEQYASQYEIY
CCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RNAYKHIQENGEVQEIYKTLQDQTGKIIGRDFVGYKRNPMTQIYDSAVKNLTKLGAELGL
HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
SPKSRSDLIKLNLDDHKDERSVADRMKEFLGG
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA