| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492686
Identifier: 116492686
GI number: 116492686
Start: 921259
End: 922038
Strand: Reverse
Name: 116492686
Synonym: PEPE_0921
Alternate gene names: NA
Gene position: 922038-921259 (Counterclockwise)
Preceding gene: 116492689
Following gene: 116492683
Centisome position: 50.32
GC content: 35.64
Gene sequence:
>780_bases ATGAAAATTAAGAATGATTTAATTTACGATGAAATTCACGCTTTAAAAGCTGACTTATACCAACCTGATAATGCTTCTAA GGGCTTGATTATTGATATCCATGGCGGAGGCTGGTTTAGAGGTGACAAAGCTAAAGATCAAGATTTAGCGGAAGCTTTGG TAAAGGACGGATTTTCCGTTATTGTTCCTAACTATCGATTAACTCCAGACGCTTATTATCCAGCACCTTTAGACGATATG GATACTTTATATCACTGGATTAAAACTTCTTCAAAATTGTTTGATAGTGATCGAATTGCCGTAGTTGGTTCATCTGCTGG TGGAAACATGGCTGTCGAAATGGGAATTAAATATGGACTCCCGATTGTTTCTTTGTCTGGGATTCTTGATATTGATGATT GGTTAAATGAGCATACTGCCGTAATTGCTCAACCTGATCATAAACAAGATTTTACAAATTCCAAAAGTTCTGAAATAAAC CAGACTGGTCAAAACGACGCTTTTTATAAATGGTTTGTTACTAATTATTTTAACGGAAACTCAGATCAATATTCACTAGC AACCCCCTACAAACATGTCAACAGTCAACCCGGACCGATGTTTTTAGCAAACTCATTAAATGAATTTGTGCCAACAAGTG GTGTTTTAGAAATGGCAAAAATTTTAACTAGTAAAAACGTTCCCTACGTGGAATGGATGTTACCTGGTACTCAGCATGCA AAAGGATATCTAGAAATCGTATATCCTACTGTTTTAAATTTCCTCAATCAATATATCTAG
Upstream 100 bases:
>100_bases GATGAATTGATTATTAAACTAACACCCGTTTTGACAACTAAATTAGACTAGTTTTAGAGTGATAACCAAATCTTTCAAAT AACTAGAGAGAAGGAACGTA
Downstream 100 bases:
>100_bases CTCTCGATTAAAAATAATTATTACTTTAACAGACTTATCAGGAAGATATATAAAAAACTACCTTGAAATTTATTCAAGGT AGTTTTTTCAATTCAAAGTA
Product: esterase/lipase
Products: NA
Alternate protein names: Esterase; Lipase; Esterase/Lipase-Like Protein; Lipase/Esterase; Triacylglycerol Lipase; Alpha/Beta Hydrolase Fold-3 Domain Protein; Lipoprotein; Alpha/Beta Hydrolase Domain-Containing Protein; Pectinesterase; Peptidase; Alpha/Beta Hydrolase Fold Protein; Carboxylic Ester Hydrolase; Hydrolase Alpha/Beta Domain Protein
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKIKNDLIYDEIHALKADLYQPDNASKGLIIDIHGGGWFRGDKAKDQDLAEALVKDGFSVIVPNYRLTPDAYYPAPLDDM DTLYHWIKTSSKLFDSDRIAVVGSSAGGNMAVEMGIKYGLPIVSLSGILDIDDWLNEHTAVIAQPDHKQDFTNSKSSEIN QTGQNDAFYKWFVTNYFNGNSDQYSLATPYKHVNSQPGPMFLANSLNEFVPTSGVLEMAKILTSKNVPYVEWMLPGTQHA KGYLEIVYPTVLNFLNQYI
Sequences:
>Translated_259_residues MKIKNDLIYDEIHALKADLYQPDNASKGLIIDIHGGGWFRGDKAKDQDLAEALVKDGFSVIVPNYRLTPDAYYPAPLDDM DTLYHWIKTSSKLFDSDRIAVVGSSAGGNMAVEMGIKYGLPIVSLSGILDIDDWLNEHTAVIAQPDHKQDFTNSKSSEIN QTGQNDAFYKWFVTNYFNGNSDQYSLATPYKHVNSQPGPMFLANSLNEFVPTSGVLEMAKILTSKNVPYVEWMLPGTQHA KGYLEIVYPTVLNFLNQYI >Mature_259_residues MKIKNDLIYDEIHALKADLYQPDNASKGLIIDIHGGGWFRGDKAKDQDLAEALVKDGFSVIVPNYRLTPDAYYPAPLDDM DTLYHWIKTSSKLFDSDRIAVVGSSAGGNMAVEMGIKYGLPIVSLSGILDIDDWLNEHTAVIAQPDHKQDFTNSKSSEIN QTGQNDAFYKWFVTNYFNGNSDQYSLATPYKHVNSQPGPMFLANSLNEFVPTSGVLEMAKILTSKNVPYVEWMLPGTQHA KGYLEIVYPTVLNFLNQYI
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28982; Mature: 28982
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKNDLIYDEIHALKADLYQPDNASKGLIIDIHGGGWFRGDKAKDQDLAEALVKDGFSV CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCCCCHHHHHHHHHHCCCEE IVPNYRLTPDAYYPAPLDDMDTLYHWIKTSSKLFDSDRIAVVGSSAGGNMAVEMGIKYGL EECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECHHHCC PIVSLSGILDIDDWLNEHTAVIAQPDHKQDFTNSKSSEINQTGQNDAFYKWFVTNYFNGN CEEEECCEEECHHHHCCCEEEEECCCCCHHCCCCCCHHHHCCCCCCCEEEEEEEEEECCC SDQYSLATPYKHVNSQPGPMFLANSLNEFVPTSGVLEMAKILTSKNVPYVEWMLPGTQHA CCCEEEECCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC KGYLEIVYPTVLNFLNQYI CCEEEEHHHHHHHHHHHCC >Mature Secondary Structure MKIKNDLIYDEIHALKADLYQPDNASKGLIIDIHGGGWFRGDKAKDQDLAEALVKDGFSV CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCCCCHHHHHHHHHHCCCEE IVPNYRLTPDAYYPAPLDDMDTLYHWIKTSSKLFDSDRIAVVGSSAGGNMAVEMGIKYGL EECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECHHHCC PIVSLSGILDIDDWLNEHTAVIAQPDHKQDFTNSKSSEINQTGQNDAFYKWFVTNYFNGN CEEEECCEEECHHHHCCCEEEEECCCCCHHCCCCCCHHHHCCCCCCCEEEEEEEEEECCC SDQYSLATPYKHVNSQPGPMFLANSLNEFVPTSGVLEMAKILTSKNVPYVEWMLPGTQHA CCCEEEECCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC KGYLEIVYPTVLNFLNQYI CCEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA