Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492683

Identifier: 116492683

GI number: 116492683

Start: 917706

End: 919139

Strand: Reverse

Name: 116492683

Synonym: PEPE_0918

Alternate gene names: NA

Gene position: 919139-917706 (Counterclockwise)

Preceding gene: 116492686

Following gene: 116492680

Centisome position: 50.16

GC content: 34.94

Gene sequence:

>1434_bases
ATGCAAATTAATAAGAAACGTAAACTAGCATGGAGACTAGGAATAGCTTGCTTAATATTAGGTATTCTAATAATTCAACA
ACTCTATTATCAATCGACACATTTTTGGACAAATACCACGATTGATAATATCAATATTAGCCACCTCAATTATCAAGAGG
CAGTTAAAAAAATTGAGAACCAACGGGTGACGCCAAGTTATACTATTAACGATCCCCAAAACAAGAAGGTGTTAGCTAGT
AAAAAGTTTAATAACATTCCAGTTACCGATTATGAAACGCAATTGAAGTATCGACTAACTGAACAAAGGAATCGACTATG
GTGGTCGATTAACCATAGTACCAAAGAATTTAAAGCTTTAACTTTATATAAAAAAAGCGCCCTGCTTTCTGCTATAAAAA
CAGATCAACCGTCTTTACAAAAACATTTAGAAGCAATTAATGCTTCACGGACCATGCCACAAAATGGAAAAGTAATGATC
CAAGATGGAAAAGTTTCTTTATTGTCCGCTCACTCTGGTAATCAGATATCGGTAAATCAGACCGTGGAAAAAGTTAGTGA
TAAACTTTTAAATACACCTAATAAACACGTTGAAATCACTGCCCCATTACTTTCTGAAACATGGAGTGGAAAAACCACGG
CTAAAAAAATCAGATTACTATTAAAAAAGCAGTTTACGTTTCGAGCTAAAGGACACCAAATTACTGGTCAAGTAAGTGAT
TTAATAGAAAATGGAACGATTAGTAAAGATGGTCCATCAATCGACTTAAAGCCCGCCTATAAATTCATTAAGCGTTTTAA
CCATAAATACACGCTTTCTGGAGCACAAAATTTAACCTTTACAACAGTCCAAGGCAAACAGGTATCTTTTAGTAACGCTG
AGGGCACTCTAGGTTGGAGTTTAAATACGGATAGTGAAGCACAACATCTTATCCAAAGTTTACTGGCAGGAAAAAATAAT
GTTTCAGCTAAAAACTTCAATCAGGCTAATCAAACGCTAAATCAAAAAAATTGGCATAAAAAAATAGCTAATTCCGATCA
TATCGAAATAGATTTAACGCATGAACGACTATATTTAGTACAAAATCAAACAGTGGCGCAAAAAATTCGGATTAACACTG
GATCTCCCAAAATTAATATTGCTACCCCAACAGGCGCTTATTTCATTAAATTCAAAATTGCGCCTATAACTATGCGAGGT
TATGAAAAAAATGGAGAACCTTATAAATCTTACGTGCCACAAGCAGACAATTTAACCGATGACGGGATATTTATTCATTC
CGCTCCATGGGTACAAGCCTCTGTATTTGGTAATCCTAGTCAGCGTTACAATCATGGCTCTAACGGTTGTATCAACGTTC
CACCTAAGGATATGGTGAAACTATATCAAAAAACAACCGTAGATGAACCAGTAATTATCTATGGACAAGGTTAA

Upstream 100 bases:

>100_bases
TTTAAAAATTTATCAAGGATTTCGTAATAACTGCTTCACAAAAATGTAACATTGATGTAATATTTATGAAATAAAAGTGA
AATAGAAAGAAGCCAATAAA

Downstream 100 bases:

>100_bases
TCCGTTTGGAATCTATCTCCAATTAAACATATAAAAAATAAAAGAAGGACATCCCTAAAGGACGTCCTTCTTTTATTTTT
TATTTAATTTTTAGTTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: ErfK Family Protein; Secreted Protein; ErfK/YbiS/YcfS/YnhG Superfamily Protein; Ykud Domain-Containing Protein; Extracellular Protein

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MQINKKRKLAWRLGIACLILGILIIQQLYYQSTHFWTNTTIDNINISHLNYQEAVKKIENQRVTPSYTINDPQNKKVLAS
KKFNNIPVTDYETQLKYRLTEQRNRLWWSINHSTKEFKALTLYKKSALLSAIKTDQPSLQKHLEAINASRTMPQNGKVMI
QDGKVSLLSAHSGNQISVNQTVEKVSDKLLNTPNKHVEITAPLLSETWSGKTTAKKIRLLLKKQFTFRAKGHQITGQVSD
LIENGTISKDGPSIDLKPAYKFIKRFNHKYTLSGAQNLTFTTVQGKQVSFSNAEGTLGWSLNTDSEAQHLIQSLLAGKNN
VSAKNFNQANQTLNQKNWHKKIANSDHIEIDLTHERLYLVQNQTVAQKIRINTGSPKINIATPTGAYFIKFKIAPITMRG
YEKNGEPYKSYVPQADNLTDDGIFIHSAPWVQASVFGNPSQRYNHGSNGCINVPPKDMVKLYQKTTVDEPVIIYGQG

Sequences:

>Translated_477_residues
MQINKKRKLAWRLGIACLILGILIIQQLYYQSTHFWTNTTIDNINISHLNYQEAVKKIENQRVTPSYTINDPQNKKVLAS
KKFNNIPVTDYETQLKYRLTEQRNRLWWSINHSTKEFKALTLYKKSALLSAIKTDQPSLQKHLEAINASRTMPQNGKVMI
QDGKVSLLSAHSGNQISVNQTVEKVSDKLLNTPNKHVEITAPLLSETWSGKTTAKKIRLLLKKQFTFRAKGHQITGQVSD
LIENGTISKDGPSIDLKPAYKFIKRFNHKYTLSGAQNLTFTTVQGKQVSFSNAEGTLGWSLNTDSEAQHLIQSLLAGKNN
VSAKNFNQANQTLNQKNWHKKIANSDHIEIDLTHERLYLVQNQTVAQKIRINTGSPKINIATPTGAYFIKFKIAPITMRG
YEKNGEPYKSYVPQADNLTDDGIFIHSAPWVQASVFGNPSQRYNHGSNGCINVPPKDMVKLYQKTTVDEPVIIYGQG
>Mature_477_residues
MQINKKRKLAWRLGIACLILGILIIQQLYYQSTHFWTNTTIDNINISHLNYQEAVKKIENQRVTPSYTINDPQNKKVLAS
KKFNNIPVTDYETQLKYRLTEQRNRLWWSINHSTKEFKALTLYKKSALLSAIKTDQPSLQKHLEAINASRTMPQNGKVMI
QDGKVSLLSAHSGNQISVNQTVEKVSDKLLNTPNKHVEITAPLLSETWSGKTTAKKIRLLLKKQFTFRAKGHQITGQVSD
LIENGTISKDGPSIDLKPAYKFIKRFNHKYTLSGAQNLTFTTVQGKQVSFSNAEGTLGWSLNTDSEAQHLIQSLLAGKNN
VSAKNFNQANQTLNQKNWHKKIANSDHIEIDLTHERLYLVQNQTVAQKIRINTGSPKINIATPTGAYFIKFKIAPITMRG
YEKNGEPYKSYVPQADNLTDDGIFIHSAPWVQASVFGNPSQRYNHGSNGCINVPPKDMVKLYQKTTVDEPVIIYGQG

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53918; Mature: 53918

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQINKKRKLAWRLGIACLILGILIIQQLYYQSTHFWTNTTIDNINISHLNYQEAVKKIEN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEECCEEEEECCHHHHHHHHHC
QRVTPSYTINDPQNKKVLASKKFNNIPVTDYETQLKYRLTEQRNRLWWSINHSTKEFKAL
CCCCCCEEECCCCCCEEEEECCCCCCCCCCCHHHHHEEEHHCCCCEEEEECCCCCHHHEE
TLYKKSALLSAIKTDQPSLQKHLEAINASRTMPQNGKVMIQDGKVSLLSAHSGNQISVNQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCEEEHHH
TVEKVSDKLLNTPNKHVEITAPLLSETWSGKTTAKKIRLLLKKQFTFRAKGHQITGQVSD
HHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCEECCHHHH
LIENGTISKDGPSIDLKPAYKFIKRFNHKYTLSGAQNLTFTTVQGKQVSFSNAEGTLGWS
HHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEECCCEEEECCCCCEEEEE
LNTDSEAQHLIQSLLAGKNNVSAKNFNQANQTLNQKNWHKKIANSDHIEIDLTHERLYLV
CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEE
QNQTVAQKIRINTGSPKINIATPTGAYFIKFKIAPITMRGYEKNGEPYKSYVPQADNLTD
ECCCEEEEEEEECCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCCHHHHHCCCCCCCCC
DGIFIHSAPWVQASVFGNPSQRYNHGSNGCINVPPKDMVKLYQKTTVDEPVIIYGQG
CCEEEECCCCEEEEECCCCHHHCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure
MQINKKRKLAWRLGIACLILGILIIQQLYYQSTHFWTNTTIDNINISHLNYQEAVKKIEN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEECCEEEEECCHHHHHHHHHC
QRVTPSYTINDPQNKKVLASKKFNNIPVTDYETQLKYRLTEQRNRLWWSINHSTKEFKAL
CCCCCCEEECCCCCCEEEEECCCCCCCCCCCHHHHHEEEHHCCCCEEEEECCCCCHHHEE
TLYKKSALLSAIKTDQPSLQKHLEAINASRTMPQNGKVMIQDGKVSLLSAHSGNQISVNQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCEEEHHH
TVEKVSDKLLNTPNKHVEITAPLLSETWSGKTTAKKIRLLLKKQFTFRAKGHQITGQVSD
HHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCEECCHHHH
LIENGTISKDGPSIDLKPAYKFIKRFNHKYTLSGAQNLTFTTVQGKQVSFSNAEGTLGWS
HHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEECCCEEEECCCCCEEEEE
LNTDSEAQHLIQSLLAGKNNVSAKNFNQANQTLNQKNWHKKIANSDHIEIDLTHERLYLV
CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEE
QNQTVAQKIRINTGSPKINIATPTGAYFIKFKIAPITMRGYEKNGEPYKSYVPQADNLTD
ECCCEEEEEEEECCCCEEEEECCCCEEEEEEEEEEEEEECCCCCCCHHHHHCCCCCCCCC
DGIFIHSAPWVQASVFGNPSQRYNHGSNGCINVPPKDMVKLYQKTTVDEPVIIYGQG
CCEEEECCCCEEEEECCCCHHHCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA