Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is 116492514
Identifier: 116492514
GI number: 116492514
Start: 782084
End: 782488
Strand: Reverse
Name: 116492514
Synonym: PEPE_0746
Alternate gene names: NA
Gene position: 782488-782084 (Counterclockwise)
Preceding gene: 116492515
Following gene: 116492513
Centisome position: 42.7
GC content: 33.83
Gene sequence:
>405_bases ATGAAAAGAACTTTAGTAATTTTTGCAACACTGCTTGCACTGTTTACTTTATCAGCCTGTCATGACGATTCTATGGATGC TAATAAGATGGGAACAAAGCTTGAAAAGAAATACGTTGAAAAAAATAGCTATGGAGTATGGGAAGATAAAGACAACTCCG CTGTACAATATTCTGCAAATAACAAGGGGAAAATTGTAGCAATTGAATTTAACTATAAACAAAGCTACAAGCCTGTATCA AATAAAGCTGCGTTCGCTGATTATAAGGGAAAAACTGCCGATGACTTAAAGTGGGTAAAAGATGATCTTTACCATTCTAA ATCAAAAGATAAGTATTACCGTATAAGTGAAAGCACTGATTCAGATGGGAAAATTACGCACGCTGCAATATTTTTTAATC ACTAA
Upstream 100 bases:
>100_bases ACGATTTGGAGTTCAATATAGTGAATCATACTGTGAAATGTAATTTCTTCGACCACACCCGAAGTCGTTAAAAGCTGTAC ATATTTTGGAGGAGAAATGT
Downstream 100 bases:
>100_bases AAAAGCATAAACAAAAAAGCCACATCCCTACTCCCGCCAAGAAGAAAGATGTGACTTAACAAAACAAAACTACTCTTGAG TAGCTCTTTTAATATACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKRTLVIFATLLALFTLSACHDDSMDANKMGTKLEKKYVEKNSYGVWEDKDNSAVQYSANNKGKIVAIEFNYKQSYKPVS NKAAFADYKGKTADDLKWVKDDLYHSKSKDKYYRISESTDSDGKITHAAIFFNH
Sequences:
>Translated_134_residues MKRTLVIFATLLALFTLSACHDDSMDANKMGTKLEKKYVEKNSYGVWEDKDNSAVQYSANNKGKIVAIEFNYKQSYKPVS NKAAFADYKGKTADDLKWVKDDLYHSKSKDKYYRISESTDSDGKITHAAIFFNH >Mature_134_residues MKRTLVIFATLLALFTLSACHDDSMDANKMGTKLEKKYVEKNSYGVWEDKDNSAVQYSANNKGKIVAIEFNYKQSYKPVS NKAAFADYKGKTADDLKWVKDDLYHSKSKDKYYRISESTDSDGKITHAAIFFNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15311; Mature: 15311
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTLVIFATLLALFTLSACHDDSMDANKMGTKLEKKYVEKNSYGVWEDKDNSAVQYSAN CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECC NKGKIVAIEFNYKQSYKPVSNKAAFADYKGKTADDLKWVKDDLYHSKSKDKYYRISESTD CCCCEEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCC SDGKITHAAIFFNH CCCCEEEEEEEECC >Mature Secondary Structure MKRTLVIFATLLALFTLSACHDDSMDANKMGTKLEKKYVEKNSYGVWEDKDNSAVQYSAN CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECC NKGKIVAIEFNYKQSYKPVSNKAAFADYKGKTADDLKWVKDDLYHSKSKDKYYRISESTD CCCCEEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCC SDGKITHAAIFFNH CCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA