Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is 116492515
Identifier: 116492515
GI number: 116492515
Start: 782546
End: 782983
Strand: Reverse
Name: 116492515
Synonym: PEPE_0747
Alternate gene names: NA
Gene position: 782983-782546 (Counterclockwise)
Preceding gene: 116492516
Following gene: 116492514
Centisome position: 42.73
GC content: 33.33
Gene sequence:
>438_bases ATGAATAACTTGATGACTTATCTTTGCAATTATGCTTATGACCATGGCATTGGTTATCAATTAGACAGAACTTCATACAA GCCAGATGAAGTATCTTTTTACATGGAGTTAAATAATACTGTGTACATCAACACAAATTACATAAATGAAGAAGAAGTTC CCTTTCAATTCGCACATGAAATAAGTCATGCTTTAAATGGAGATAAGGGGTCTAACAGTTTTTGTTCAAATGTTTTTTAC ATTAGAGAAGAATGCGCAGCTAATAAACGTGCCGTTGGAATCCTATTAGAATATTGCGAACTAAATAATCTAGCCTACTC TGATTCTGTTGACTTTATGCTGGCTTTTGGAATTCCATTGAAGGTTGGATATGTGGTTGATGAAGTGTTTAAGGAACGAT TTGGAGTTCAATATAGTGAATCATACTGTGAAATGTAA
Upstream 100 bases:
>100_bases ACGTATGTATCAAGGGAAACCAATTAGTGATGCACAAAGAGAAACAATGAAAGGAATTATCAGAGCTTATCTAGATGCTC AAGATAAAAATGAATAGCGT
Downstream 100 bases:
>100_bases TTTCTTCGACCACACCCGAAGTCGTTAAAAGCTGTACATATTTTGGAGGAGAAATGTATGAAAAGAACTTTAGTAATTTT TGCAACACTGCTTGCACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MNNLMTYLCNYAYDHGIGYQLDRTSYKPDEVSFYMELNNTVYINTNYINEEEVPFQFAHEISHALNGDKGSNSFCSNVFY IREECAANKRAVGILLEYCELNNLAYSDSVDFMLAFGIPLKVGYVVDEVFKERFGVQYSESYCEM
Sequences:
>Translated_145_residues MNNLMTYLCNYAYDHGIGYQLDRTSYKPDEVSFYMELNNTVYINTNYINEEEVPFQFAHEISHALNGDKGSNSFCSNVFY IREECAANKRAVGILLEYCELNNLAYSDSVDFMLAFGIPLKVGYVVDEVFKERFGVQYSESYCEM >Mature_145_residues MNNLMTYLCNYAYDHGIGYQLDRTSYKPDEVSFYMELNNTVYINTNYINEEEVPFQFAHEISHALNGDKGSNSFCSNVFY IREECAANKRAVGILLEYCELNNLAYSDSVDFMLAFGIPLKVGYVVDEVFKERFGVQYSESYCEM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16790; Mature: 16790
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLMTYLCNYAYDHGIGYQLDRTSYKPDEVSFYMELNNTVYINTNYINEEEVPFQFAHE CCHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCHHHHHH ISHALNGDKGSNSFCSNVFYIREECAANKRAVGILLEYCELNNLAYSDSVDFMLAFGIPL HHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCE KVGYVVDEVFKERFGVQYSESYCEM EHHHHHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure MNNLMTYLCNYAYDHGIGYQLDRTSYKPDEVSFYMELNNTVYINTNYINEEEVPFQFAHE CCHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCHHHHHH ISHALNGDKGSNSFCSNVFYIREECAANKRAVGILLEYCELNNLAYSDSVDFMLAFGIPL HHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCE KVGYVVDEVFKERFGVQYSESYCEM EHHHHHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA