Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is 116492190
Identifier: 116492190
GI number: 116492190
Start: 433573
End: 434079
Strand: Direct
Name: 116492190
Synonym: PEPE_0387
Alternate gene names: NA
Gene position: 433573-434079 (Clockwise)
Preceding gene: 116492189
Following gene: 116492191
Centisome position: 23.66
GC content: 39.45
Gene sequence:
>507_bases ATGGCATATAGGACACCACCTTTTTTAACACCAATTGCGATTGTTACCATGGTCATTGCTTTAAGTGCTACAAACGTAAT CGTTAATAAGGCGACCAACACTTCTGAAGGAGCGCCCGTGCGTTCTTCAAAAGTAATGAATAATGAAAGTAGTAGTAATT TAGACGATAAAAATTCATCTGATGATAAATCAAGTAAAAGTTCCATGGATGAAGATAGTAGCTCTAAAGATGATGAAACA AGTAGTTCCAAAGAAGATGAGACAATGGATTCAAATAGCACCGAAGACTCACAAAGTGATGCGGAAAGCTCATCAGATGC TACGGCAAGCAGTGGTAAAACTAGCACAAATACAAATGAAAATAATAATGACGATACTACTAATAATGCATCTAGTGATG CTGACACGGATACAAATCAAGCATCTAGTGCAGCACAAAGTTCGGCAGGTACCACAACTCAGAATGCCCAAGCTGCATCA GGTAGCTCGGCGACTAGCACACAATAG
Upstream 100 bases:
>100_bases AAGTAGATGATTTTTTTAAGTTATTGCAAACTTAATCAATATTTGAAATAAAAGCTAAATATTTTTGATATGCTTTTTTT AAAGACGGAGGGAAAGAGAA
Downstream 100 bases:
>100_bases GGGGAATTAACGTGATTTCATTTCTTACATTAGCGAGCCATTATATGGGAATGATCAATGTTAAGAGTAAACTAAAGAAT CAAGTTTACACGGTCATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MAYRTPPFLTPIAIVTMVIALSATNVIVNKATNTSEGAPVRSSKVMNNESSSNLDDKNSSDDKSSKSSMDEDSSSKDDET SSSKEDETMDSNSTEDSQSDAESSSDATASSGKTSTNTNENNNDDTTNNASSDADTDTNQASSAAQSSAGTTTQNAQAAS GSSATSTQ
Sequences:
>Translated_168_residues MAYRTPPFLTPIAIVTMVIALSATNVIVNKATNTSEGAPVRSSKVMNNESSSNLDDKNSSDDKSSKSSMDEDSSSKDDET SSSKEDETMDSNSTEDSQSDAESSSDATASSGKTSTNTNENNNDDTTNNASSDADTDTNQASSAAQSSAGTTTQNAQAAS GSSATSTQ >Mature_167_residues AYRTPPFLTPIAIVTMVIALSATNVIVNKATNTSEGAPVRSSKVMNNESSSNLDDKNSSDDKSSKSSMDEDSSSKDDETS SSKEDETMDSNSTEDSQSDAESSSDATASSGKTSTNTNENNNDDTTNNASSDADTDTNQASSAAQSSAGTTTQNAQAASG SSATSTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17239; Mature: 17107
Theoretical pI: Translated: 3.76; Mature: 3.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYRTPPFLTPIAIVTMVIALSATNVIVNKATNTSEGAPVRSSKVMNNESSSNLDDKNSS CCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC DDKSSKSSMDEDSSSKDDETSSSKEDETMDSNSTEDSQSDAESSSDATASSGKTSTNTNE CCCHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC NNNDDTTNNASSDADTDTNQASSAAQSSAGTTTQNAQAASGSSATSTQ CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AYRTPPFLTPIAIVTMVIALSATNVIVNKATNTSEGAPVRSSKVMNNESSSNLDDKNSS CCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC DDKSSKSSMDEDSSSKDDETSSSKEDETMDSNSTEDSQSDAESSSDATASSGKTSTNTNE CCCHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC NNNDDTTNNASSDADTDTNQASSAAQSSAGTTTQNAQAASGSSATSTQ CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA