Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is 116492191
Identifier: 116492191
GI number: 116492191
Start: 434091
End: 434945
Strand: Direct
Name: 116492191
Synonym: PEPE_0388
Alternate gene names: NA
Gene position: 434091-434945 (Clockwise)
Preceding gene: 116492190
Following gene: 116492192
Centisome position: 23.69
GC content: 38.48
Gene sequence:
>855_bases GTGATTTCATTTCTTACATTAGCGAGCCATTATATGGGAATGATCAATGTTAAGAGTAAACTAAAGAATCAAGTTTACAC GGTCATGGCATTCGTCGGAAATTGGTATTTACTATATATTGGTATTCGTTTCTTACAAAATGGACGCTATCTTAGAGGAT TATTGCTATTAGCAATCTTTTTAGTGTTCTTGTATTTTTCAATTATGAATATTTACTACTTCTTCACGACTAAGAAAGCA CCTTTTGATATTTCTCCTATCTTGGAGAAATATGTGGGTGGTGCTCCGGAAGAAATTCGAGAAAAAGAAGAATTTAGACG GCGCTTAGCCCAAGTGGAACGCCAAAGTCGTCAAGCTAGCAGTTCACCAGCAGGGATGTTTGACCAACGGATGCTACTAC CTGCACAGGTCGAATCCACGGGCGAACAAAAGCGAAATATTGAACAAATTGCGATGTTGATGAAAAATGCTGGAATCCTT TTTGAGGATTACGGTGGACGAAGTGATGAACAGATTAAGGAACAATTACAACCAGGACAAACGGAAGTTTACGCTATTGG GGACGAAGGCATTCAATTCCCATTTGCTGACATAAAAATGATTAATGGGCAGCCTACCATTTATGCTGGATTAAATCAGA TGGAAGAGTTACCAGTTGGCGTAATTACCAAAGTTGGGGCAGCTAGTTTCGAAGCTGCTAAACAAGAAAATCACCTTTAC TTGGCGGATGTATTATTAAGTGGCGGTGAGAAGAAAATGATAGGACGCTCAGGGATTATCACTGAAAATGAAAATTTTTT TATAAAAGTGAATATTGCCTATAAACGCCGTAATACCTCGCTTCATGAGGTTTAA
Upstream 100 bases:
>100_bases AAGCATCTAGTGCAGCACAAAGTTCGGCAGGTACCACAACTCAGAATGCCCAAGCTGCATCAGGTAGCTCGGCGACTAGC ACACAATAGGGGGAATTAAC
Downstream 100 bases:
>100_bases AGTATAAAATAATTAAGGACTGTTCAAGCGATATGCTTTGACAGTCCTTTTTTTGTCGCTTATATTTTAAATAGGTATAG AAAAAATGGGAGCTTATAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MISFLTLASHYMGMINVKSKLKNQVYTVMAFVGNWYLLYIGIRFLQNGRYLRGLLLLAIFLVFLYFSIMNIYYFFTTKKA PFDISPILEKYVGGAPEEIREKEEFRRRLAQVERQSRQASSSPAGMFDQRMLLPAQVESTGEQKRNIEQIAMLMKNAGIL FEDYGGRSDEQIKEQLQPGQTEVYAIGDEGIQFPFADIKMINGQPTIYAGLNQMEELPVGVITKVGAASFEAAKQENHLY LADVLLSGGEKKMIGRSGIITENENFFIKVNIAYKRRNTSLHEV
Sequences:
>Translated_284_residues MISFLTLASHYMGMINVKSKLKNQVYTVMAFVGNWYLLYIGIRFLQNGRYLRGLLLLAIFLVFLYFSIMNIYYFFTTKKA PFDISPILEKYVGGAPEEIREKEEFRRRLAQVERQSRQASSSPAGMFDQRMLLPAQVESTGEQKRNIEQIAMLMKNAGIL FEDYGGRSDEQIKEQLQPGQTEVYAIGDEGIQFPFADIKMINGQPTIYAGLNQMEELPVGVITKVGAASFEAAKQENHLY LADVLLSGGEKKMIGRSGIITENENFFIKVNIAYKRRNTSLHEV >Mature_284_residues MISFLTLASHYMGMINVKSKLKNQVYTVMAFVGNWYLLYIGIRFLQNGRYLRGLLLLAIFLVFLYFSIMNIYYFFTTKKA PFDISPILEKYVGGAPEEIREKEEFRRRLAQVERQSRQASSSPAGMFDQRMLLPAQVESTGEQKRNIEQIAMLMKNAGIL FEDYGGRSDEQIKEQLQPGQTEVYAIGDEGIQFPFADIKMINGQPTIYAGLNQMEELPVGVITKVGAASFEAAKQENHLY LADVLLSGGEKKMIGRSGIITENENFFIKVNIAYKRRNTSLHEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32346; Mature: 32346
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISFLTLASHYMGMINVKSKLKNQVYTVMAFVGNWYLLYIGIRFLQNGRYLRGLLLLAIF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LVFLYFSIMNIYYFFTTKKAPFDISPILEKYVGGAPEEIREKEEFRRRLAQVERQSRQAS HHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC SSPAGMFDQRMLLPAQVESTGEQKRNIEQIAMLMKNAGILFEDYGGRSDEQIKEQLQPGQ CCCCCCCHHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCC TEVYAIGDEGIQFPFADIKMINGQPTIYAGLNQMEELPVGVITKVGAASFEAAKQENHLY EEEEEECCCCCCCCCHHEEEECCCCEEEECHHHHHHCCHHHHHHCCCHHHHHHHCCCCEE LADVLLSGGEKKMIGRSGIITENENFFIKVNIAYKRRNTSLHEV EEHHHHCCCCCEECCCCCCEECCCCEEEEEEEEEEECCCCCCCC >Mature Secondary Structure MISFLTLASHYMGMINVKSKLKNQVYTVMAFVGNWYLLYIGIRFLQNGRYLRGLLLLAIF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LVFLYFSIMNIYYFFTTKKAPFDISPILEKYVGGAPEEIREKEEFRRRLAQVERQSRQAS HHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC SSPAGMFDQRMLLPAQVESTGEQKRNIEQIAMLMKNAGILFEDYGGRSDEQIKEQLQPGQ CCCCCCCHHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCC TEVYAIGDEGIQFPFADIKMINGQPTIYAGLNQMEELPVGVITKVGAASFEAAKQENHLY EEEEEECCCCCCCCCHHEEEECCCCEEEECHHHHHHCCHHHHHHCCCHHHHHHHCCCCEE LADVLLSGGEKKMIGRSGIITENENFFIKVNIAYKRRNTSLHEV EEHHHHCCCCCEECCCCCCEECCCCEEEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA