Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
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Accession | NC_008525 |
Length | 1,832,387 |
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The map label for this gene is fur [H]
Identifier: 116492189
GI number: 116492189
Start: 433029
End: 433478
Strand: Direct
Name: fur [H]
Synonym: PEPE_0386
Alternate gene names: 116492189
Gene position: 433029-433478 (Clockwise)
Preceding gene: 116492188
Following gene: 116492190
Centisome position: 23.63
GC content: 35.33
Gene sequence:
>450_bases TTGAACAAAACTAGTAAAGAAATTGCGGTAAAAATTTTAAAAGCTAATAACTATAAATTAACTAAACAACGCCAGAGCTT ACTCAATATTCTAGCTATCCATGAGGACCGCTACATGGAATTGACGGAGTTAGATCAGTTAATGCGCCAAGAGTATCCTA AAATGAGCTACAATACAATTTATCGAAACATTAAGGAATTTTCTGAAATTGGGATTGTTGAAGAAAATCAAAATGAAAAT GATGGTAAAACCGAAGTAAAGTTAGATTGTAATGAACGGCACACTCATCATCACCATTTTATTTGTAATAACTGTGGCAA AGTACGGGAACTCCAAATGTGCCCTCTAAGCTTCTTTAGTGAGCAATTGCCAGGGGCTGAGATTACGGGACATCATTTTG AGTTATATGGGTTATGCGCAGATTGTAAGCAATTAATGGGTGAAAAGTAG
Upstream 100 bases:
>100_bases AATTTTATCAAAGAGTTAAAGAAGCAACCAAAAAGATACCAAATGAAGGTTAATTATGGTAGGGTAAAACGTAATGATTA CTATTTAGAGGTGCAGATTT
Downstream 100 bases:
>100_bases ATGATTTTTTTAAGTTATTGCAAACTTAATCAATATTTGAAATAAAAGCTAAATATTTTTGATATGCTTTTTTTAAAGAC GGAGGGAAAGAGAAATGGCA
Product: Fe2+/Zn2+ uptake regulation protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MNKTSKEIAVKILKANNYKLTKQRQSLLNILAIHEDRYMELTELDQLMRQEYPKMSYNTIYRNIKEFSEIGIVEENQNEN DGKTEVKLDCNERHTHHHHFICNNCGKVRELQMCPLSFFSEQLPGAEITGHHFELYGLCADCKQLMGEK
Sequences:
>Translated_149_residues MNKTSKEIAVKILKANNYKLTKQRQSLLNILAIHEDRYMELTELDQLMRQEYPKMSYNTIYRNIKEFSEIGIVEENQNEN DGKTEVKLDCNERHTHHHHFICNNCGKVRELQMCPLSFFSEQLPGAEITGHHFELYGLCADCKQLMGEK >Mature_149_residues MNKTSKEIAVKILKANNYKLTKQRQSLLNILAIHEDRYMELTELDQLMRQEYPKMSYNTIYRNIKEFSEIGIVEENQNEN DGKTEVKLDCNERHTHHHHFICNNCGKVRELQMCPLSFFSEQLPGAEITGHHFELYGLCADCKQLMGEK
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17506; Mature: 17506
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTSKEIAVKILKANNYKLTKQRQSLLNILAIHEDRYMELTELDQLMRQEYPKMSYNTI CCCCHHHHEEHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH YRNIKEFSEIGIVEENQNENDGKTEVKLDCNERHTHHHHFICNNCGKVRELQMCPLSFFS HHHHHHHHHCCCEECCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHCCCHHHHH EQLPGAEITGHHFELYGLCADCKQLMGEK HHCCCCCCCCCEEHEEHHHHHHHHHHCCC >Mature Secondary Structure MNKTSKEIAVKILKANNYKLTKQRQSLLNILAIHEDRYMELTELDQLMRQEYPKMSYNTI CCCCHHHHEEHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH YRNIKEFSEIGIVEENQNENDGKTEVKLDCNERHTHHHHFICNNCGKVRELQMCPLSFFS HHHHHHHHHCCCEECCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHCCCHHHHH EQLPGAEITGHHFELYGLCADCKQLMGEK HHCCCCCCCCCEEHEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA