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The map label for this gene is ywnB [H]

Identifier: 116492132

GI number: 116492132

Start: 378913

End: 379536

Strand: Direct

Name: ywnB [H]

Synonym: PEPE_0329

Alternate gene names: 116492132

Gene position: 378913-379536 (Clockwise)

Preceding gene: 116492131

Following gene: 116492138

Centisome position: 20.68

GC content: 37.98

Gene sequence:

>624_bases
ATGAAGATTGGGATTATTGCGGCAAGTGGCAAAGCCGGCGCATTGATTACTAAAGAAGCAGTTCAGCGTGGGCACGAAGT
GACCGCCATCGTCCGTCATCCAGACCGAGTTAAAATGGATGTTTCAATTTTACAAAAAGATTTATTTGATTTGACTACAA
CTGATTTAGAAAATTTCGATGTAGTAGTTGATGCATTTAGAGCGGCCGAAGGAAAAGAAGAACAATTTTTGACATCAATT
GAGCACTTAGTAAAAATTTTGACAGGAACGTCAGTTAAATTATTTGTAGTGGGTGGGGCAGGAAGCCTATACGTCGATGA
TCATATTACCCATCTTTATGAAACTCCGACATTTCCAGAAGTGTTTAAGCCCACTTCAATCATGATGGGAAGAGGACTAG
AAGTTTTAGAGAATCAGAATGGATTGAATTGGACTTATATTAGTCCAGCGGCTGATTTTAAAGCTGATGGTCCCAAGAAG
GGACATTACGTTTTAGGAAATGAAATGCTAATGAGTGATGCTAACGGTAAAAGCGAAATTAGTTATGCGGATTATGCAAT
TGCTATGTTAGATGAAATTGAAACTGGAGAACATAACTGTGAACATTTAAGTATAGTTTGGTAA

Upstream 100 bases:

>100_bases
ATAAAGTCGTAACTCTATTTGGGGTTACGGCTTTTTATTTGCTTACGATTAATAACTCGTTTATTCTGGGGGTATAAATA
ATTAGGTGAGGTGATGTTTC

Downstream 100 bases:

>100_bases
AAAAAGATGGAATCATGCCCGATTTTAAACGAGGTATGATTCCATCTTTTTAATTGTTTTCTGAAATTTTAAATCTTTTT
GCTAACATCGTATTCGATGC

Product: putative NADH-flavin reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKIGIIAASGKAGALITKEAVQRGHEVTAIVRHPDRVKMDVSILQKDLFDLTTTDLENFDVVVDAFRAAEGKEEQFLTSI
EHLVKILTGTSVKLFVVGGAGSLYVDDHITHLYETPTFPEVFKPTSIMMGRGLEVLENQNGLNWTYISPAADFKADGPKK
GHYVLGNEMLMSDANGKSEISYADYAIAMLDEIETGEHNCEHLSIVW

Sequences:

>Translated_207_residues
MKIGIIAASGKAGALITKEAVQRGHEVTAIVRHPDRVKMDVSILQKDLFDLTTTDLENFDVVVDAFRAAEGKEEQFLTSI
EHLVKILTGTSVKLFVVGGAGSLYVDDHITHLYETPTFPEVFKPTSIMMGRGLEVLENQNGLNWTYISPAADFKADGPKK
GHYVLGNEMLMSDANGKSEISYADYAIAMLDEIETGEHNCEHLSIVW
>Mature_207_residues
MKIGIIAASGKAGALITKEAVQRGHEVTAIVRHPDRVKMDVSILQKDLFDLTTTDLENFDVVVDAFRAAEGKEEQFLTSI
EHLVKILTGTSVKLFVVGGAGSLYVDDHITHLYETPTFPEVFKPTSIMMGRGLEVLENQNGLNWTYISPAADFKADGPKK
GHYVLGNEMLMSDANGKSEISYADYAIAMLDEIETGEHNCEHLSIVW

Specific function: Unknown

COG id: COG2910

COG function: function code R; Putative NADH-flavin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 22784; Mature: 22784

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGIIAASGKAGALITKEAVQRGHEVTAIVRHPDRVKMDVSILQKDLFDLTTTDLENFD
CEEEEEEECCCCCEEEEHHHHHCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCHH
VVVDAFRAAEGKEEQFLTSIEHLVKILTGTSVKLFVVGGAGSLYVDDHITHLYETPTFPE
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCHHHHHHCCCCCCH
VFKPTSIMMGRGLEVLENQNGLNWTYISPAADFKADGPKKGHYVLGNEMLMSDANGKSEI
HHCCHHHHHCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCCC
SYADYAIAMLDEIETGEHNCEHLSIVW
CHHHHHHHHHHHHCCCCCCCCEEEEEC
>Mature Secondary Structure
MKIGIIAASGKAGALITKEAVQRGHEVTAIVRHPDRVKMDVSILQKDLFDLTTTDLENFD
CEEEEEEECCCCCEEEEHHHHHCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHCCCCCHH
VVVDAFRAAEGKEEQFLTSIEHLVKILTGTSVKLFVVGGAGSLYVDDHITHLYETPTFPE
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCHHHHHHCCCCCCH
VFKPTSIMMGRGLEVLENQNGLNWTYISPAADFKADGPKKGHYVLGNEMLMSDANGKSEI
HHCCHHHHHCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEECCEEEEECCCCCCCC
SYADYAIAMLDEIETGEHNCEHLSIVW
CHHHHHHHHHHHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]