Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is yggX [C]
Identifier: 116515280
GI number: 116515280
Start: 387302
End: 387550
Strand: Direct
Name: yggX [C]
Synonym: BCc_363
Alternate gene names: 116515280
Gene position: 387302-387550 (Clockwise)
Preceding gene: 116515279
Following gene: 116515288
Centisome position: 93.02
GC content: 16.87
Gene sequence:
>249_bases ATGAAAAAAAAACGTAAAATTTTTTGTTCTTTTTTAAAAAAAGAAACGGAAGGATTAGAATATCAATTTTTTCCTGGAAA AATTGGACAACAAATTTATGAACAAATATCTAAAAAAGCATGGAATATATGGCTAGAAAAACAAACAAAAATAATAAATG AAAAAAAATTAAATATGTTTATTGAAAAAGATAGAATATTTTTAGAAAAAAAAATGAAAAATTTTTTTTTCAAAAAAAAA AAAAATTAA
Upstream 100 bases:
>100_bases TATAAAGAAAAAATATGGATGAATATAAATTCAAAAAAAAAAATAGGAATACCTACTCCAATAAAAAAAATATTATTACA ATTAAAAAAAAAAAAAAAAA
Downstream 100 bases:
>100_bases ATTAAATTATTTATATAATTAATATTTCTTTTTATATATTTAAATAAATCTTCCAGTAGAATAAAATTCTTATCATTTTT ATTAAATTTTAATTGAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MKKKRKIFCSFLKKETEGLEYQFFPGKIGQQIYEQISKKAWNIWLEKQTKIINEKKLNMFIEKDRIFLEKKMKNFFFKKK KN
Sequences:
>Translated_82_residues MKKKRKIFCSFLKKETEGLEYQFFPGKIGQQIYEQISKKAWNIWLEKQTKIINEKKLNMFIEKDRIFLEKKMKNFFFKKK KN >Mature_82_residues MKKKRKIFCSFLKKETEGLEYQFFPGKIGQQIYEQISKKAWNIWLEKQTKIINEKKLNMFIEKDRIFLEKKMKNFFFKKK KN
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes [H]
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family [H]
Homologues:
Organism=Escherichia coli, GI1789332, Length=78, Percent_Identity=51.2820512820513, Blast_Score=89, Evalue=4e-20,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007457 - ProDom: PD029191 [H]
Pfam domain/function: PF04362 Iron_traffic [H]
EC number: NA
Molecular weight: Translated: 10201; Mature: 10201
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKRKIFCSFLKKETEGLEYQFFPGKIGQQIYEQISKKAWNIWLEKQTKIINEKKLNMF CCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEKDRIFLEKKMKNFFFKKKKN HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKKRKIFCSFLKKETEGLEYQFFPGKIGQQIYEQISKKAWNIWLEKQTKIINEKKLNMF CCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEKDRIFLEKKMKNFFFKKKKN HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA