Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is htpG
Identifier: 116515224
GI number: 116515224
Start: 343540
End: 345414
Strand: Direct
Name: htpG
Synonym: BCc_302
Alternate gene names: 116515224
Gene position: 343540-345414 (Clockwise)
Preceding gene: 116515223
Following gene: 116515225
Centisome position: 82.51
GC content: 20.8
Gene sequence:
>1875_bases ATGAATAATAAAAATAAAATAACACATACATTTCAATCAGAAGTAAAAGAATTACTACATCTAATGATTCATTCTTTATA TTCAAATAAAGAAATATTTTTAAGAGAATTAATATCTAATGCATCAGATGCAATAGAAAAAATAAGATTTGAAAAACTAT ATAGTTTAAAAAAATATAGAGAAAATTTATATACACCTAAAATAAAAATTTCCATTAAAAAAGATGAAAAAAAAATTATT ATTTCTGATAATGGTATAGGTATGACATATAAGGAAGTAATAAAAAATTTAGGAACAATTGCAAAATCAGGAACAAAATC ATTTTTAAATAAAATTCAAAATATTGAAAAAAAAGAAAAAAATGATTTTATCGGACAATTTGGAGTAGGATTTTATTCAT CTTTTATTGTTTCCAACTCTGTTTCTGTTTATACAAGACATGCAAAAGAAAAAAAAAACATTGGAACACTTTGGATATCA GAAGGTAAAGGAAAATATTCTGTAGAAAAAATTTCTAAAGAAGAACATGGAACAATAGTAGAATTATCATTAAAATCTTC TGAAAAAGAATTTTTAGAAATTTGGAAAATAAAAAATATTATAAAAAAATATTCAGATCATATTTCCATACCAATAGAAA TAGAAAACTACGACGAAAAAACAAAAACAATTTCTTGGGAAAAAATTAACAAAGCACAAGCATTATGGACAATTAATAAA AATAATATTACTAAAAAAAAATATCAAGATTTTTATAAATATCTTACTAATGATTCAGAAAAACCATTACTTTGGAGTCA TAATAAAGTTGAAGGAACACAAGAATATATTAATTTATTATATATTCCTAAAAAAGCAACATGGGATATTTGGCATCAAG AAAACAAACATGGTTTAAAGTTGTATGTTAAACATGTTTTTATTATGGATGAAGCAACACAATTTCTTCCAAATTATCTA CGTTTTGTAAAAGGAATTATTGATTCCCAGGATCTTCCGTTAAATATTTCTAGAGAAATATTACAAGATAGCTCAATTAC TCATATTTTACGAAAATCATTAACTAAACGTATTTTAAATATACTAAATAATTTATCAGAAAATAATATTAAAAAATATC AAAAATTTTGGAATGTGTTCGGAATAATTATTAAAGAAGGAATAGCTGAAGATTCTGAAAATAAAACTATATTATCTAAT TTATTACGTTTTTCTTCTATAAAAAAAGGAAACATAGAACAAACATTATCTTTAAATGAATATATAAAAAACATGAAAAA AAATCAGAAAAAAATATATTTCATTACTTCAGATAGTTATAAATCAGCTTTAAATAGTCCGAATTTAGAAATATTTAAAG AAAACGATATTGATGTATTAATATTATCTGAAAAAATTGATGAATGGATGATGAATTATTTAACTGAATTTAATAATATA AAATTTCAATCAGTAAGTAAATTAGATGATACTATAGATAGTCTTTTATTAAAAAAAAATGTTTCTAATGAAAAAAACAC ATTTAATGAATTTATTGAAAAAACAAAAAAAATATTGAAAAATAAAGTTAAAGATGTAAAAATTACATATCGTTTAAAAA ATACACCAGCTATAGTATTAACTGATACCAATGATATGAGCACACAAATGGCAAAAATATTTAGTGCTGCTGGACAACCA ATTCCAAAAATAAAATATATTTTAGAAATTAATCCATTACATCCATTAATAAAAAAAATAGAAAAAATAAAAAATGAAAA AGATTTTTCTAATTGGATAAAAATAATATTTGATCAATCAATTCTATCAGAAAAAGGTAGTTTAGAAAATCCACATAAAT TTATTCAAAGAATAAACAATTTCTTTATATCATAA
Upstream 100 bases:
>100_bases CAAATAATATAAAACATATGACAAAAAATCAGATATAATATATAAAAATTAAATAATTTATAAAACAAATTATTTATCTA TATTTTAATAGGTATTCAAT
Downstream 100 bases:
>100_bases AAATTTTATTTATAAAAATATCACTTATTTAAAATTGATGTATAATAAAATAATTTTTATAAAGGAAAATTTTTTATAAT GCGTATTATTATGATAGGTC
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G
Number of amino acids: Translated: 624; Mature: 624
Protein sequence:
>624_residues MNNKNKITHTFQSEVKELLHLMIHSLYSNKEIFLRELISNASDAIEKIRFEKLYSLKKYRENLYTPKIKISIKKDEKKII ISDNGIGMTYKEVIKNLGTIAKSGTKSFLNKIQNIEKKEKNDFIGQFGVGFYSSFIVSNSVSVYTRHAKEKKNIGTLWIS EGKGKYSVEKISKEEHGTIVELSLKSSEKEFLEIWKIKNIIKKYSDHISIPIEIENYDEKTKTISWEKINKAQALWTINK NNITKKKYQDFYKYLTNDSEKPLLWSHNKVEGTQEYINLLYIPKKATWDIWHQENKHGLKLYVKHVFIMDEATQFLPNYL RFVKGIIDSQDLPLNISREILQDSSITHILRKSLTKRILNILNNLSENNIKKYQKFWNVFGIIIKEGIAEDSENKTILSN LLRFSSIKKGNIEQTLSLNEYIKNMKKNQKKIYFITSDSYKSALNSPNLEIFKENDIDVLILSEKIDEWMMNYLTEFNNI KFQSVSKLDDTIDSLLLKKNVSNEKNTFNEFIEKTKKILKNKVKDVKITYRLKNTPAIVLTDTNDMSTQMAKIFSAAGQP IPKIKYILEINPLHPLIKKIEKIKNEKDFSNWIKIIFDQSILSEKGSLENPHKFIQRINNFFIS
Sequences:
>Translated_624_residues MNNKNKITHTFQSEVKELLHLMIHSLYSNKEIFLRELISNASDAIEKIRFEKLYSLKKYRENLYTPKIKISIKKDEKKII ISDNGIGMTYKEVIKNLGTIAKSGTKSFLNKIQNIEKKEKNDFIGQFGVGFYSSFIVSNSVSVYTRHAKEKKNIGTLWIS EGKGKYSVEKISKEEHGTIVELSLKSSEKEFLEIWKIKNIIKKYSDHISIPIEIENYDEKTKTISWEKINKAQALWTINK NNITKKKYQDFYKYLTNDSEKPLLWSHNKVEGTQEYINLLYIPKKATWDIWHQENKHGLKLYVKHVFIMDEATQFLPNYL RFVKGIIDSQDLPLNISREILQDSSITHILRKSLTKRILNILNNLSENNIKKYQKFWNVFGIIIKEGIAEDSENKTILSN LLRFSSIKKGNIEQTLSLNEYIKNMKKNQKKIYFITSDSYKSALNSPNLEIFKENDIDVLILSEKIDEWMMNYLTEFNNI KFQSVSKLDDTIDSLLLKKNVSNEKNTFNEFIEKTKKILKNKVKDVKITYRLKNTPAIVLTDTNDMSTQMAKIFSAAGQP IPKIKYILEINPLHPLIKKIEKIKNEKDFSNWIKIIFDQSILSEKGSLENPHKFIQRINNFFIS >Mature_624_residues MNNKNKITHTFQSEVKELLHLMIHSLYSNKEIFLRELISNASDAIEKIRFEKLYSLKKYRENLYTPKIKISIKKDEKKII ISDNGIGMTYKEVIKNLGTIAKSGTKSFLNKIQNIEKKEKNDFIGQFGVGFYSSFIVSNSVSVYTRHAKEKKNIGTLWIS EGKGKYSVEKISKEEHGTIVELSLKSSEKEFLEIWKIKNIIKKYSDHISIPIEIENYDEKTKTISWEKINKAQALWTINK NNITKKKYQDFYKYLTNDSEKPLLWSHNKVEGTQEYINLLYIPKKATWDIWHQENKHGLKLYVKHVFIMDEATQFLPNYL RFVKGIIDSQDLPLNISREILQDSSITHILRKSLTKRILNILNNLSENNIKKYQKFWNVFGIIIKEGIAEDSENKTILSN LLRFSSIKKGNIEQTLSLNEYIKNMKKNQKKIYFITSDSYKSALNSPNLEIFKENDIDVLILSEKIDEWMMNYLTEFNNI KFQSVSKLDDTIDSLLLKKNVSNEKNTFNEFIEKTKKILKNKVKDVKITYRLKNTPAIVLTDTNDMSTQMAKIFSAAGQP IPKIKYILEINPLHPLIKKIEKIKNEKDFSNWIKIIFDQSILSEKGSLENPHKFIQRINNFFIS
Specific function: Molecular chaperone. Has ATPase activity
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family
Homologues:
Organism=Homo sapiens, GI20149594, Length=677, Percent_Identity=36.3367799113737, Blast_Score=382, Evalue=1e-106, Organism=Homo sapiens, GI155722983, Length=640, Percent_Identity=33.4375, Blast_Score=356, Evalue=3e-98, Organism=Homo sapiens, GI4507677, Length=678, Percent_Identity=32.5958702064897, Blast_Score=331, Evalue=1e-90, Organism=Homo sapiens, GI154146191, Length=407, Percent_Identity=37.3464373464373, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI153792590, Length=407, Percent_Identity=37.3464373464373, Blast_Score=244, Evalue=2e-64, Organism=Escherichia coli, GI1786679, Length=625, Percent_Identity=54.08, Blast_Score=734, Evalue=0.0, Organism=Caenorhabditis elegans, GI17559162, Length=671, Percent_Identity=35.618479880775, Blast_Score=374, Evalue=1e-104, Organism=Caenorhabditis elegans, GI17542208, Length=667, Percent_Identity=33.5832083958021, Blast_Score=342, Evalue=3e-94, Organism=Caenorhabditis elegans, GI115535205, Length=646, Percent_Identity=31.733746130031, Blast_Score=289, Evalue=4e-78, Organism=Caenorhabditis elegans, GI115535167, Length=431, Percent_Identity=35.9628770301624, Blast_Score=252, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6323840, Length=684, Percent_Identity=35.0877192982456, Blast_Score=388, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6325016, Length=410, Percent_Identity=34.6341463414634, Blast_Score=251, Evalue=2e-67, Organism=Drosophila melanogaster, GI17647529, Length=684, Percent_Identity=34.7953216374269, Blast_Score=377, Evalue=1e-104, Organism=Drosophila melanogaster, GI21357739, Length=638, Percent_Identity=36.833855799373, Blast_Score=357, Evalue=2e-98, Organism=Drosophila melanogaster, GI24586016, Length=645, Percent_Identity=34.1085271317829, Blast_Score=342, Evalue=3e-94,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): HTPG_BUCCC (Q057D9)
Other databases:
- EMBL: CP000263 - RefSeq: YP_802853.1 - ProteinModelPortal: Q057D9 - STRING: Q057D9 - EnsemblBacteria: EBBUCT00000001441 - GeneID: 4440909 - GenomeReviews: CP000263_GR - KEGG: bcc:BCc_302 - eggNOG: COG0326 - GeneTree: EBGT00050000008181 - HOGENOM: HBG631012 - OMA: AIYYITA - ProtClustDB: PRK05218 - BioCyc: BAPH372461:BCC_302-MONOMER - GO: GO:0005737 - HAMAP: MF_00505 - InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 - Gene3D: G3DSA:3.30.565.10 - PANTHER: PTHR11528 - PIRSF: PIRSF002583 - PRINTS: PR00775 - SMART: SM00387
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 73126; Mature: 73126
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKNKITHTFQSEVKELLHLMIHSLYSNKEIFLRELISNASDAIEKIRFEKLYSLKKYR CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENLYTPKIKISIKKDEKKIIISDNGIGMTYKEVIKNLGTIAKSGTKSFLNKIQNIEKKEK HHHCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NDFIGQFGVGFYSSFIVSNSVSVYTRHAKEKKNIGTLWISEGKGKYSVEKISKEEHGTIV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCEE ELSLKSSEKEFLEIWKIKNIIKKYSDHISIPIEIENYDEKTKTISWEKINKAQALWTINK EEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHCCCHHHHCCCCEEEEECC NNITKKKYQDFYKYLTNDSEKPLLWSHNKVEGTQEYINLLYIPKKATWDIWHQENKHGLK CCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHEEEEECCCCCCCHHHCCCCCCCCE LYVKHVFIMDEATQFLPNYLRFVKGIIDSQDLPLNISREILQDSSITHILRKSLTKRILN EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH ILNNLSENNIKKYQKFWNVFGIIIKEGIAEDSENKTILSNLLRFSSIKKGNIEQTLSLNE HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH YIKNMKKNQKKIYFITSDSYKSALNSPNLEIFKENDIDVLILSEKIDEWMMNYLTEFNNI HHHHHHCCCCEEEEEECCHHHHHCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHCCC KFQSVSKLDDTIDSLLLKKNVSNEKNTFNEFIEKTKKILKNKVKDVKITYRLKNTPAIVL CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEE TDTNDMSTQMAKIFSAAGQPIPKIKYILEINPLHPLIKKIEKIKNEKDFSNWIKIIFDQS ECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHH ILSEKGSLENPHKFIQRINNFFIS HHHCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNNKNKITHTFQSEVKELLHLMIHSLYSNKEIFLRELISNASDAIEKIRFEKLYSLKKYR CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENLYTPKIKISIKKDEKKIIISDNGIGMTYKEVIKNLGTIAKSGTKSFLNKIQNIEKKEK HHHCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH NDFIGQFGVGFYSSFIVSNSVSVYTRHAKEKKNIGTLWISEGKGKYSVEKISKEEHGTIV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCEE ELSLKSSEKEFLEIWKIKNIIKKYSDHISIPIEIENYDEKTKTISWEKINKAQALWTINK EEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHCCCHHHHCCCCEEEEECC NNITKKKYQDFYKYLTNDSEKPLLWSHNKVEGTQEYINLLYIPKKATWDIWHQENKHGLK CCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHEEEEECCCCCCCHHHCCCCCCCCE LYVKHVFIMDEATQFLPNYLRFVKGIIDSQDLPLNISREILQDSSITHILRKSLTKRILN EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH ILNNLSENNIKKYQKFWNVFGIIIKEGIAEDSENKTILSNLLRFSSIKKGNIEQTLSLNE HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH YIKNMKKNQKKIYFITSDSYKSALNSPNLEIFKENDIDVLILSEKIDEWMMNYLTEFNNI HHHHHHCCCCEEEEEECCHHHHHCCCCCCEEEECCCCEEEEEHHHHHHHHHHHHHHHCCC KFQSVSKLDDTIDSLLLKKNVSNEKNTFNEFIEKTKKILKNKVKDVKITYRLKNTPAIVL CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEE TDTNDMSTQMAKIFSAAGQPIPKIKYILEINPLHPLIKKIEKIKNEKDFSNWIKIIFDQS ECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHH ILSEKGSLENPHKFIQRINNFFIS HHHCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA