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The map label for this gene is ybaB [C]

Identifier: 116515223

GI number: 116515223

Start: 343124

End: 343432

Strand: Direct

Name: ybaB [C]

Synonym: BCc_301

Alternate gene names: 116515223

Gene position: 343124-343432 (Clockwise)

Preceding gene: 116515222

Following gene: 116515224

Centisome position: 82.41

GC content: 21.36

Gene sequence:

>309_bases
ATGTATACAAAAGAAAAAATCAATGAGTTAATGGAAAAAGCACAAGTCATGAAAAAAGAAATGGAAAAAATACAAAAAGA
TATAAAAATGACGAAAATAAAAGGAGAATCAGGTGCTGGTTTGGTAACTATTTTTATGAATGGTAATTATAATTGTAGAA
AAACAAAAATAAATGATGAAATTTGGAATGAAAAAAACAAAATTTTAATTCAAGATTTAATTACATCAGCTATAAATAAT
GCTGTTAACAAAATAACAGAATTACAAAAAAAAAAAATTATATTAAAAACCCCATTTCATAATGAATAA

Upstream 100 bases:

>100_bases
TTTTATATAATTAATAAAATAATTAATGAAACTAATAAAAAAATACAGATATCTCTATAAGTAAAATAATTTAAAATAAA
TTTAAAATTGGATAAATAAC

Downstream 100 bases:

>100_bases
AATATATCAAATAATATAAAACATATGACAAAAAATCAGATATAATATATAAAAATTAAATAATTTATAAAACAAATTAT
TTATCTATATTTTAATAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MYTKEKINELMEKAQVMKKEMEKIQKDIKMTKIKGESGAGLVTIFMNGNYNCRKTKINDEIWNEKNKILIQDLITSAINN
AVNKITELQKKKIILKTPFHNE

Sequences:

>Translated_102_residues
MYTKEKINELMEKAQVMKKEMEKIQKDIKMTKIKGESGAGLVTIFMNGNYNCRKTKINDEIWNEKNKILIQDLITSAINN
AVNKITELQKKKIILKTPFHNE
>Mature_102_residues
MYTKEKINELMEKAQVMKKEMEKIQKDIKMTKIKGESGAGLVTIFMNGNYNCRKTKINDEIWNEKNKILIQDLITSAINN
AVNKITELQKKKIILKTPFHNE

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=93, Percent_Identity=39.7849462365591, Blast_Score=82, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y701_BUCCC (Q057E0)

Other databases:

- EMBL:   CP000263
- RefSeq:   YP_802852.1
- ProteinModelPortal:   Q057E0
- SMR:   Q057E0
- STRING:   Q057E0
- EnsemblBacteria:   EBBUCT00000001452
- GeneID:   4440908
- GenomeReviews:   CP000263_GR
- KEGG:   bcc:BCc_301
- eggNOG:   COG0718
- GeneTree:   EBGT00050000007803
- HOGENOM:   HBG734215
- OMA:   REMSAIT
- BioCyc:   BAPH372461:BCC_301-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11900; Mature: 11900

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTKEKINELMEKAQVMKKEMEKIQKDIKMTKIKGESGAGLVTIFMNGNYNCRKTKINDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCCCHH
IWNEKNKILIQDLITSAINNAVNKITELQKKKIILKTPFHNE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCC
>Mature Secondary Structure
MYTKEKINELMEKAQVMKKEMEKIQKDIKMTKIKGESGAGLVTIFMNGNYNCRKTKINDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCCCHH
IWNEKNKILIQDLITSAINNAVNKITELQKKKIILKTPFHNE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA