Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
---|---|
Accession | NC_008513 |
Length | 416,380 |
Click here to switch to the map view.
The map label for this gene is bolA [C]
Identifier: 116515216
GI number: 116515216
Start: 331217
End: 331516
Strand: Direct
Name: bolA [C]
Synonym: BCc_292
Alternate gene names: 116515216
Gene position: 331217-331516 (Clockwise)
Preceding gene: 116515210
Following gene: 116515217
Centisome position: 79.55
GC content: 13.67
Gene sequence:
>300_bases ATGAAAAAAAAAATTAAAAAAAAAATTAAATCTATATTTGATATATTTTATCTAAAAATTTCTAAAGTTACTCATTTTAA TAAAAATTATAGAAAAAATTCAAAACATTATATGATAATAATATCTGCATATGAATTTAATAAATTATCTTTATTAGAGC AACATAAAAAAATTTATAAAATTTTCTTTAAATATATTCCAAAAAAAATTTATTCTATACAAATACAAACATTTACAGTA TTTCAATGGAAAGAAAAGAAAAAAAAAATATTTTTACCAGTATCTTGTATAAATTCTTAA
Upstream 100 bases:
>100_bases CAAAATATAAATAAAAATATTTATCATAATTATAAATATTATGATCTTAATAATTATTAATTCAATAATAAAATAAAAAA TTATAATTAAATCTACTATA
Downstream 100 bases:
>100_bases AAATAAAATTTTTAAATGAATGAATATATATTTGTATTTAAAAATAAAATCAAAATAAAAATATTTATTTCTAAAATATT TTTTATAAAAATATATATGA
Product: BolA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MKKKIKKKIKSIFDIFYLKISKVTHFNKNYRKNSKHYMIIISAYEFNKLSLLEQHKKIYKIFFKYIPKKIYSIQIQTFTV FQWKEKKKKIFLPVSCINS
Sequences:
>Translated_99_residues MKKKIKKKIKSIFDIFYLKISKVTHFNKNYRKNSKHYMIIISAYEFNKLSLLEQHKKIYKIFFKYIPKKIYSIQIQTFTV FQWKEKKKKIFLPVSCINS >Mature_99_residues MKKKIKKKIKSIFDIFYLKISKVTHFNKNYRKNSKHYMIIISAYEFNKLSLLEQHKKIYKIFFKYIPKKIYSIQIQTFTV FQWKEKKKKIFLPVSCINS
Specific function: Plays An Important Role In General Stress Response (Heat Shock, Acidic Stress, Oxidative Stress, Carbon-Starvation Stress And Osmotic Shock). Involved In Morphogenetic Pathway. Has A Role Is The Induction Of The Expression Of Daca (Pbp5), Dacc (Pbp6) And
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12205; Mature: 12205
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKIKKKIKSIFDIFYLKISKVTHFNKNYRKNSKHYMIIISAYEFNKLSLLEQHKKIYK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH IFFKYIPKKIYSIQIQTFTVFQWKEKKKKIFLPVSCINS HHHHHHHHHHEEEEEEEEEEEEECCCCCEEEEEEEECCC >Mature Secondary Structure MKKKIKKKIKSIFDIFYLKISKVTHFNKNYRKNSKHYMIIISAYEFNKLSLLEQHKKIYK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH IFFKYIPKKIYSIQIQTFTVFQWKEKKKKIFLPVSCINS HHHHHHHHHHEEEEEEEEEEEEECCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA