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The map label for this gene is yhaR [C]

Identifier: 116515158

GI number: 116515158

Start: 260143

End: 260508

Strand: Direct

Name: yhaR [C]

Synonym: BCc_225

Alternate gene names: 116515158

Gene position: 260143-260508 (Clockwise)

Preceding gene: 116515157

Following gene: 116515170

Centisome position: 62.48

GC content: 18.58

Gene sequence:

>366_bases
ATGTTTAAAAAAAATATAGTATTTGGTCCTTATTCACCTTGTATAAAAATTAATAATTTATTTTTCTTTTCTGGGCAAAT
TCCTATATGTTTAAAAACAGGATTAATGCCTAAAAATTTATCTGAACAAACTATTTTAACATTAAAAAACATTAAAAGAT
TATTATATAAAAATAAATTAAATATAAAAAACATAATTAAAACTACTATTTTTACAACAAATATGGATAAATTAAATGAA
ATTAATTTATCCTATAAAAATTTTTTTAAAAAATATACTAATGTATATCCTGCACGATCATGTATTGGCATATCAAAATT
ACCTAAAAAAGCAAAAATAGAAATAGAAGTAATAGCAGCTTTATGA

Upstream 100 bases:

>100_bases
TAAAGCCTTATTAGTTTCATGTTTGCATAAAAAAAAAATTTTAATATAAAATATTCATTTATATATTTGGATATAATATA
ATAATATAAAAGAGAAACTT

Downstream 100 bases:

>100_bases
AATAAATATGCCACTTAGTGGCATAAAATTGATATTTTAAAAAATAAAAATATATAATTCAATTTTATAAAAAAAATAAA
AAACAAATTAATTTTATATT

Product: YhaR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MFKKNIVFGPYSPCIKINNLFFFSGQIPICLKTGLMPKNLSEQTILTLKNIKRLLYKNKLNIKNIIKTTIFTTNMDKLNE
INLSYKNFFKKYTNVYPARSCIGISKLPKKAKIEIEVIAAL

Sequences:

>Translated_121_residues
MFKKNIVFGPYSPCIKINNLFFFSGQIPICLKTGLMPKNLSEQTILTLKNIKRLLYKNKLNIKNIIKTTIFTTNMDKLNE
INLSYKNFFKKYTNVYPARSCIGISKLPKKAKIEIEVIAAL
>Mature_121_residues
MFKKNIVFGPYSPCIKINNLFFFSGQIPICLKTGLMPKNLSEQTILTLKNIKRLLYKNKLNIKNIIKTTIFTTNMDKLNE
INLSYKNFFKKYTNVYPARSCIGISKLPKKAKIEIEVIAAL

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=114, Percent_Identity=31.5789473684211, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87082213, Length=111, Percent_Identity=40.5405405405405, Blast_Score=111, Evalue=1e-26,
Organism=Escherichia coli, GI87082396, Length=111, Percent_Identity=37.8378378378378, Blast_Score=103, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI25148896, Length=113, Percent_Identity=32.7433628318584, Blast_Score=80, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71982075, Length=113, Percent_Identity=32.7433628318584, Blast_Score=80, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71982068, Length=113, Percent_Identity=32.7433628318584, Blast_Score=79, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6322138, Length=109, Percent_Identity=33.9449541284404, Blast_Score=75, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6320899, Length=106, Percent_Identity=32.0754716981132, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13952; Mature: 13952

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKNIVFGPYSPCIKINNLFFFSGQIPICLKTGLMPKNLSEQTILTLKNIKRLLYKNKL
CCCCCEEECCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC
NIKNIIKTTIFTTNMDKLNEINLSYKNFFKKYTNVYPARSCIGISKLPKKAKIEIEVIAA
CHHHHHHHHEEECCCCCHHHCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEEEEE
L
C
>Mature Secondary Structure
MFKKNIVFGPYSPCIKINNLFFFSGQIPICLKTGLMPKNLSEQTILTLKNIKRLLYKNKL
CCCCCEEECCCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC
NIKNIIKTTIFTTNMDKLNEINLSYKNFFKKYTNVYPARSCIGISKLPKKAKIEIEVIAA
CHHHHHHHHEEECCCCCHHHCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEEEEE
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]