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The map label for this gene is yrbA [C]

Identifier: 116515170

GI number: 116515170

Start: 275374

End: 275628

Strand: Direct

Name: yrbA [C]

Synonym: BCc_238

Alternate gene names: 116515170

Gene position: 275374-275628 (Clockwise)

Preceding gene: 116515158

Following gene: 116515171

Centisome position: 66.14

GC content: 14.12

Gene sequence:

>255_bases
ATGAATTTTATTCAATTAAGTAAATTAATTAAAAAAAAATTAAACTTAAAAAAAGTATTAATTTCAAATTATAATAATAA
TATTTTAATTACAGCAATAGGAAATTTTTTTTTAAATATGAGTTCGTTTGAAAAACAAAAACATATATATAAAGTATTAA
TACCATATTTTTTAAATAAAACTATACATGCTGTTACTATAAATACATATACTATATCAGAATGGAATAATAAACAAAAT
AGCAAAAATAATTAA

Upstream 100 bases:

>100_bases
AAAATTTTTATATATATTAAAAATAATGTATATTTTTTATTTAAAAAAATTTCTAAATAAAATATATATTAAAATTTTTT
TTAAAAAAAAGAGTAAAAAT

Downstream 100 bases:

>100_bases
ATATTATATTTTTAAAGATATTAAATTATTTTTAATAAAAATCTTTAAAAATCCTAATATTATTAAAGATTTTAAAAATA
TAATGTATTTTATATTTCAA

Product: YrbA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MNFIQLSKLIKKKLNLKKVLISNYNNNILITAIGNFFLNMSSFEKQKHIYKVLIPYFLNKTIHAVTINTYTISEWNNKQN
SKNN

Sequences:

>Translated_84_residues
MNFIQLSKLIKKKLNLKKVLISNYNNNILITAIGNFFLNMSSFEKQKHIYKVLIPYFLNKTIHAVTINTYTISEWNNKQN
SKNN
>Mature_84_residues
MNFIQLSKLIKKKLNLKKVLISNYNNNILITAIGNFFLNMSSFEKQKHIYKVLIPYFLNKTIHAVTINTYTISEWNNKQN
SKNN

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 9907; Mature: 9907

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFIQLSKLIKKKLNLKKVLISNYNNNILITAIGNFFLNMSSFEKQKHIYKVLIPYFLNK
CCHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECHHHHCHHHHHHHHHHHHHHHHHHHCC
TIHAVTINTYTISEWNNKQNSKNN
EEEEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNFIQLSKLIKKKLNLKKVLISNYNNNILITAIGNFFLNMSSFEKQKHIYKVLIPYFLNK
CCHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECHHHHCHHHHHHHHHHHHHHHHHHHCC
TIHAVTINTYTISEWNNKQNSKNN
EEEEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]