Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is suhB [H]
Identifier: 116515111
GI number: 116515111
Start: 203605
End: 204426
Strand: Reverse
Name: suhB [H]
Synonym: BCc_175
Alternate gene names: 116515111
Gene position: 204426-203605 (Counterclockwise)
Preceding gene: 116515115
Following gene: 116515109
Centisome position: 49.1
GC content: 18.0
Gene sequence:
>822_bases ATGAATCCTATATTAAATATTGCTATTAGAGCTATTAGAGCAGGTGGAAAAATTATTGCACAAAATTATGATTTAAAAAA TATTTCTTGTGATATAGAAAAAAAAAAAAATTTTAAGTATATTAAAAGAATAAAAAGAAAAACTTTTTCTATTATAAATA ATTTGATTAAACAATCATACCCTAGACATTATATTTTAAATATAGATTCTAAAGAAAAAATCCAAACAAACAAAAATATT TGGATAATTAATACATTAAATGGAAAAAAAAATTTTATTCAAAAAATTCCTCATTTTTGTTTATCTATTATTATACAAGA AAAAAATCAAACATATATATCAGTTATTTATGATCCAATAAAAAATGATTTATTTACTGCAATTAAAGGTCAAGGAGCTC AATTAAATGGTTTTAGAACTAGATGTTACAAATATAATAAAAATATTTATAATACAATTATAACATTGTATTATAAAAAT AAACATGAAAAAAATATCAATTTATATATTTCATTAATGCAACAATTATTAAAGGAAAAAATTTCAATAAGACAATCTGG TTGTTCAATATTAGATTTAGCATATTTATCTTCTGGAAAAATTAATGCATATGTTAGTTTTAATGAAAAAAAATCAAATT TTTTTTTCGGGGAATTACAGATAAAAGAATCTGGAGCTCTTATAACAGATATTTTAGGTGGACATAATTATATTAAAAAT AAAACTATATGTGTAGGTTATTCAAATATATTAAAATTTATATTAAAAAAAACACGTTTTTTAAGCAAAATTTATAAAAA AAAATTGTTTTATAAAAATTAA
Upstream 100 bases:
>100_bases AAATAGATATAAAATTTATCTTTTAAAATAAAGGTAAACTTTTATTTATAAAAATTATCTTATAACAGTAAATATTAACA TAACAAGAGAGTATTTTTAT
Downstream 100 bases:
>100_bases TAATAATAGTAATTTTATTAATTGATTTTATTAAATTAGTAAATAAAAAAAAAATTATTTTTATAGAAATTTTAAAAATT TTTTATTTATAAATTTACTA
Product: hypothetical protein
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MNPILNIAIRAIRAGGKIIAQNYDLKNISCDIEKKKNFKYIKRIKRKTFSIINNLIKQSYPRHYILNIDSKEKIQTNKNI WIINTLNGKKNFIQKIPHFCLSIIIQEKNQTYISVIYDPIKNDLFTAIKGQGAQLNGFRTRCYKYNKNIYNTIITLYYKN KHEKNINLYISLMQQLLKEKISIRQSGCSILDLAYLSSGKINAYVSFNEKKSNFFFGELQIKESGALITDILGGHNYIKN KTICVGYSNILKFILKKTRFLSKIYKKKLFYKN
Sequences:
>Translated_273_residues MNPILNIAIRAIRAGGKIIAQNYDLKNISCDIEKKKNFKYIKRIKRKTFSIINNLIKQSYPRHYILNIDSKEKIQTNKNI WIINTLNGKKNFIQKIPHFCLSIIIQEKNQTYISVIYDPIKNDLFTAIKGQGAQLNGFRTRCYKYNKNIYNTIITLYYKN KHEKNINLYISLMQQLLKEKISIRQSGCSILDLAYLSSGKINAYVSFNEKKSNFFFGELQIKESGALITDILGGHNYIKN KTICVGYSNILKFILKKTRFLSKIYKKKLFYKN >Mature_273_residues MNPILNIAIRAIRAGGKIIAQNYDLKNISCDIEKKKNFKYIKRIKRKTFSIINNLIKQSYPRHYILNIDSKEKIQTNKNI WIINTLNGKKNFIQKIPHFCLSIIIQEKNQTYISVIYDPIKNDLFTAIKGQGAQLNGFRTRCYKYNKNIYNTIITLYYKN KHEKNINLYISLMQQLLKEKISIRQSGCSILDLAYLSSGKINAYVSFNEKKSNFFFGELQIKESGALITDILGGHNYIKN KTICVGYSNILKFILKKTRFLSKIYKKKLFYKN
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=218, Percent_Identity=25.2293577981651, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI221625487, Length=252, Percent_Identity=20.2380952380952, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI5031789, Length=235, Percent_Identity=20.8510638297872, Blast_Score=79, Evalue=3e-15, Organism=Escherichia coli, GI1788882, Length=260, Percent_Identity=34.6153846153846, Blast_Score=206, Evalue=2e-54, Organism=Caenorhabditis elegans, GI193202572, Length=256, Percent_Identity=21.484375, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI193202570, Length=256, Percent_Identity=21.09375, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6320493, Length=211, Percent_Identity=23.2227488151659, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357329, Length=253, Percent_Identity=20.5533596837945, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI21357303, Length=243, Percent_Identity=25.1028806584362, Blast_Score=88, Evalue=7e-18, Organism=Drosophila melanogaster, GI24664926, Length=263, Percent_Identity=23.574144486692, Blast_Score=88, Evalue=7e-18, Organism=Drosophila melanogaster, GI24664922, Length=262, Percent_Identity=21.7557251908397, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI21357957, Length=260, Percent_Identity=27.6923076923077, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24664918, Length=254, Percent_Identity=25.9842519685039, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000760 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 31954; Mature: 31954
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPILNIAIRAIRAGGKIIAQNYDLKNISCDIEKKKNFKYIKRIKRKTFSIINNLIKQSY CCHHHHHHHHHHHCCCEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PRHYILNIDSKEKIQTNKNIWIINTLNGKKNFIQKIPHFCLSIIIQEKNQTYISVIYDPI CCEEEEECCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHH KNDLFTAIKGQGAQLNGFRTRCYKYNKNIYNTIITLYYKNKHEKNINLYISLMQQLLKEK HHHHHHHHCCCCCCCCCHHHHHHHHCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHH ISIRQSGCSILDLAYLSSGKINAYVSFNEKKSNFFFGELQIKESGALITDILGGHNYIKN HHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEHHHCCCCHHCC KTICVGYSNILKFILKKTRFLSKIYKKKLFYKN CEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNPILNIAIRAIRAGGKIIAQNYDLKNISCDIEKKKNFKYIKRIKRKTFSIINNLIKQSY CCHHHHHHHHHHHCCCEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PRHYILNIDSKEKIQTNKNIWIINTLNGKKNFIQKIPHFCLSIIIQEKNQTYISVIYDPI CCEEEEECCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHH KNDLFTAIKGQGAQLNGFRTRCYKYNKNIYNTIITLYYKNKHEKNINLYISLMQQLLKEK HHHHHHHHCCCCCCCCCHHHHHHHHCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHH ISIRQSGCSILDLAYLSSGKINAYVSFNEKKSNFFFGELQIKESGALITDILGGHNYIKN HHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEEEECCCCEEEHHHCCCCHHCC KTICVGYSNILKFILKKTRFLSKIYKKKLFYKN CEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438 [H]