Definition Buchnera aphidicola str. Cc (Cinara cedri), complete genome.
Accession NC_008513
Length 416,380

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The map label for this gene is pgl [H]

Identifier: 116515115

GI number: 116515115

Start: 208553

End: 209539

Strand: Reverse

Name: pgl [H]

Synonym: BCc_179

Alternate gene names: 116515115

Gene position: 209539-208553 (Counterclockwise)

Preceding gene: 116515116

Following gene: 116515111

Centisome position: 50.32

GC content: 16.51

Gene sequence:

>987_bases
ATGAAAAAAAAAATTCTTATTTCATGTTCTAATAGTAAAGAAGTAGAGTATTGGATTTTAAAAAAAAATTATTCTTTATT
AAAAAAACAAATTATTTCAGTAAAAGGTACACCACAACCCTTAAAATTTAATAAAAATAAAAAATTATTATATATAGGGA
TAAAAAATCCAAATAAAATAATTACATATAAATTATCTAATAATAATATTTTTAAAAAAAAAAATGAAATAAATATATTT
AATACACCAAATTATATTACATTATATAAAAAAAAAAAAATATTATTTTGTGCTTCTTATCATGGAAATGGATTTATTGT
ATTTATTTTAAATAAAAATGGATTAATTAAAAAAAAAATTTATATTTTTAAAAAAATTATAGGATGTCATTCTATTAAAA
TATTTTATAAATATAAATTAATTTATATTACTGCATTAAAAGAAGATAAAATCTATATATATAAAATTAAAAATATAAAA
AATAAAATATATTTATTTTTAAAAAATATTATTTATACTACTAAGAATAGCGGTCCTAGACATATTATATTTCATCCTAT
TAAAAATTATTTATATTCTATTAATGAATTAAATGGAACAATTGATGTATGGAATATTAATAATTCTTCATATTTACTCA
TTCTACAACAATCAATTTCCTTAATACCAAAAAAATATACAAATATTCCCTGGTCTTCTGAAATTCATATACATCCTAAC
GAAAAATATTTATATGCTTGCGATCGATCTAATAATATTATTACATTCTTTATTATTAATAAAAATACTGGACATCTATC
TTACATAAAATCTTATAAAACGGAAATACAACCACGATCATTTAATATTAGTAAAGATGGAAAAATCTTAATAGTTTTAG
GAGAATTATCAAATTCTATGACAATTTATGCAATTAAAAATGGATATTTAATATTTAAAAAAAAACAATTAATCGGAAAA
AATCCATTATGGATTTTAATAGAATAA

Upstream 100 bases:

>100_bases
TTAAAAATTTTTTAAAAAAAATTATTAATAAAAATAAATAATTTTAACTATTAATTTTTAATATTATTTATCAAATAAAA
TATTTTTAATTAAGGTAGAT

Downstream 100 bases:

>100_bases
TGTTTTTTATAAAAAATTTTAAATTAAAATAACAATAATTATGTTACAAAAACCATGTAACATAATTATTTATTTTAAAT
AAAAAATATAAATAAAATTT

Product: 6-phosphogluconolactonase

Products: NA

Alternate protein names: 6-P-gluconolactonase [H]

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKKKILISCSNSKEVEYWILKKNYSLLKKQIISVKGTPQPLKFNKNKKLLYIGIKNPNKIITYKLSNNNIFKKKNEINIF
NTPNYITLYKKKKILFCASYHGNGFIVFILNKNGLIKKKIYIFKKIIGCHSIKIFYKYKLIYITALKEDKIYIYKIKNIK
NKIYLFLKNIIYTTKNSGPRHIIFHPIKNYLYSINELNGTIDVWNINNSSYLLILQQSISLIPKKYTNIPWSSEIHIHPN
EKYLYACDRSNNIITFFIINKNTGHLSYIKSYKTEIQPRSFNISKDGKILIVLGELSNSMTIYAIKNGYLIFKKKQLIGK
NPLWILIE

Sequences:

>Translated_328_residues
MKKKILISCSNSKEVEYWILKKNYSLLKKQIISVKGTPQPLKFNKNKKLLYIGIKNPNKIITYKLSNNNIFKKKNEINIF
NTPNYITLYKKKKILFCASYHGNGFIVFILNKNGLIKKKIYIFKKIIGCHSIKIFYKYKLIYITALKEDKIYIYKIKNIK
NKIYLFLKNIIYTTKNSGPRHIIFHPIKNYLYSINELNGTIDVWNINNSSYLLILQQSISLIPKKYTNIPWSSEIHIHPN
EKYLYACDRSNNIITFFIINKNTGHLSYIKSYKTEIQPRSFNISKDGKILIVLGELSNSMTIYAIKNGYLIFKKKQLIGK
NPLWILIE
>Mature_328_residues
MKKKILISCSNSKEVEYWILKKNYSLLKKQIISVKGTPQPLKFNKNKKLLYIGIKNPNKIITYKLSNNNIFKKKNEINIF
NTPNYITLYKKKKILFCASYHGNGFIVFILNKNGLIKKKIYIFKKIIGCHSIKIFYKYKLIYITALKEDKIYIYKIKNIK
NKIYLFLKNIIYTTKNSGPRHIIFHPIKNYLYSINELNGTIDVWNINNSSYLLILQQSISLIPKKYTNIPWSSEIHIHPN
EKYLYACDRSNNIITFFIINKNTGHLSYIKSYKTEIQPRSFNISKDGKILIVLGELSNSMTIYAIKNGYLIFKKKQLIGK
NPLWILIE

Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate [H]

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=330, Percent_Identity=28.1818181818182, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022528
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: =3.1.1.31 [H]

Molecular weight: Translated: 38648; Mature: 38648

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKILISCSNSKEVEYWILKKNYSLLKKQIISVKGTPQPLKFNKNKKLLYIGIKNPNKI
CCCEEEEEECCCCCEEEEEEECCHHHHHHHHEEECCCCCCEEECCCCEEEEEEECCCCEE
ITYKLSNNNIFKKKNEINIFNTPNYITLYKKKKILFCASYHGNGFIVFILNKNGLIKKKI
EEEEECCCCEEEECCCEEEEECCCEEEEEECCEEEEEEEECCCEEEEEEECCCCCEEHHH
YIFKKIIGCHSIKIFYKYKLIYITALKEDKIYIYKIKNIKNKIYLFLKNIIYTTKNSGPR
HHHHHHHCCEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCC
HIIFHPIKNYLYSINELNGTIDVWNINNSSYLLILQQSISLIPKKYTNIPWSSEIHIHPN
EEEEEEHHHHHEEEECCCCEEEEEEECCCCEEEEEECCHHHCCHHHCCCCCCCEEEECCC
EKYLYACDRSNNIITFFIINKNTGHLSYIKSYKTEIQPRSFNISKDGKILIVLGELSNSM
CEEEEEEECCCCEEEEEEEECCCCCCCEEEHHHHCCCCCEECCCCCCEEEEEEECCCCCE
TIYAIKNGYLIFKKKQLIGKNPLWILIE
EEEEEECCEEEEEEHHHCCCCCEEEEEC
>Mature Secondary Structure
MKKKILISCSNSKEVEYWILKKNYSLLKKQIISVKGTPQPLKFNKNKKLLYIGIKNPNKI
CCCEEEEEECCCCCEEEEEEECCHHHHHHHHEEECCCCCCEEECCCCEEEEEEECCCCEE
ITYKLSNNNIFKKKNEINIFNTPNYITLYKKKKILFCASYHGNGFIVFILNKNGLIKKKI
EEEEECCCCEEEECCCEEEEECCCEEEEEECCEEEEEEEECCCEEEEEEECCCCCEEHHH
YIFKKIIGCHSIKIFYKYKLIYITALKEDKIYIYKIKNIKNKIYLFLKNIIYTTKNSGPR
HHHHHHHCCEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCC
HIIFHPIKNYLYSINELNGTIDVWNINNSSYLLILQQSISLIPKKYTNIPWSSEIHIHPN
EEEEEEHHHHHEEEECCCCEEEEEEECCCCEEEEEECCHHHCCHHHCCCCCCCEEEECCC
EKYLYACDRSNNIITFFIINKNTGHLSYIKSYKTEIQPRSFNISKDGKILIVLGELSNSM
CEEEEEEECCCCEEEEEEEECCCCCCCEEEHHHHCCCCCEECCCCCCEEEEEEECCCCCE
TIYAIKNGYLIFKKKQLIGKNPLWILIE
EEEEEECCEEEEEEHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA