Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is pgl [H]
Identifier: 116515115
GI number: 116515115
Start: 208553
End: 209539
Strand: Reverse
Name: pgl [H]
Synonym: BCc_179
Alternate gene names: 116515115
Gene position: 209539-208553 (Counterclockwise)
Preceding gene: 116515116
Following gene: 116515111
Centisome position: 50.32
GC content: 16.51
Gene sequence:
>987_bases ATGAAAAAAAAAATTCTTATTTCATGTTCTAATAGTAAAGAAGTAGAGTATTGGATTTTAAAAAAAAATTATTCTTTATT AAAAAAACAAATTATTTCAGTAAAAGGTACACCACAACCCTTAAAATTTAATAAAAATAAAAAATTATTATATATAGGGA TAAAAAATCCAAATAAAATAATTACATATAAATTATCTAATAATAATATTTTTAAAAAAAAAAATGAAATAAATATATTT AATACACCAAATTATATTACATTATATAAAAAAAAAAAAATATTATTTTGTGCTTCTTATCATGGAAATGGATTTATTGT ATTTATTTTAAATAAAAATGGATTAATTAAAAAAAAAATTTATATTTTTAAAAAAATTATAGGATGTCATTCTATTAAAA TATTTTATAAATATAAATTAATTTATATTACTGCATTAAAAGAAGATAAAATCTATATATATAAAATTAAAAATATAAAA AATAAAATATATTTATTTTTAAAAAATATTATTTATACTACTAAGAATAGCGGTCCTAGACATATTATATTTCATCCTAT TAAAAATTATTTATATTCTATTAATGAATTAAATGGAACAATTGATGTATGGAATATTAATAATTCTTCATATTTACTCA TTCTACAACAATCAATTTCCTTAATACCAAAAAAATATACAAATATTCCCTGGTCTTCTGAAATTCATATACATCCTAAC GAAAAATATTTATATGCTTGCGATCGATCTAATAATATTATTACATTCTTTATTATTAATAAAAATACTGGACATCTATC TTACATAAAATCTTATAAAACGGAAATACAACCACGATCATTTAATATTAGTAAAGATGGAAAAATCTTAATAGTTTTAG GAGAATTATCAAATTCTATGACAATTTATGCAATTAAAAATGGATATTTAATATTTAAAAAAAAACAATTAATCGGAAAA AATCCATTATGGATTTTAATAGAATAA
Upstream 100 bases:
>100_bases TTAAAAATTTTTTAAAAAAAATTATTAATAAAAATAAATAATTTTAACTATTAATTTTTAATATTATTTATCAAATAAAA TATTTTTAATTAAGGTAGAT
Downstream 100 bases:
>100_bases TGTTTTTTATAAAAAATTTTAAATTAAAATAACAATAATTATGTTACAAAAACCATGTAACATAATTATTTATTTTAAAT AAAAAATATAAATAAAATTT
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6-P-gluconolactonase [H]
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MKKKILISCSNSKEVEYWILKKNYSLLKKQIISVKGTPQPLKFNKNKKLLYIGIKNPNKIITYKLSNNNIFKKKNEINIF NTPNYITLYKKKKILFCASYHGNGFIVFILNKNGLIKKKIYIFKKIIGCHSIKIFYKYKLIYITALKEDKIYIYKIKNIK NKIYLFLKNIIYTTKNSGPRHIIFHPIKNYLYSINELNGTIDVWNINNSSYLLILQQSISLIPKKYTNIPWSSEIHIHPN EKYLYACDRSNNIITFFIINKNTGHLSYIKSYKTEIQPRSFNISKDGKILIVLGELSNSMTIYAIKNGYLIFKKKQLIGK NPLWILIE
Sequences:
>Translated_328_residues MKKKILISCSNSKEVEYWILKKNYSLLKKQIISVKGTPQPLKFNKNKKLLYIGIKNPNKIITYKLSNNNIFKKKNEINIF NTPNYITLYKKKKILFCASYHGNGFIVFILNKNGLIKKKIYIFKKIIGCHSIKIFYKYKLIYITALKEDKIYIYKIKNIK NKIYLFLKNIIYTTKNSGPRHIIFHPIKNYLYSINELNGTIDVWNINNSSYLLILQQSISLIPKKYTNIPWSSEIHIHPN EKYLYACDRSNNIITFFIINKNTGHLSYIKSYKTEIQPRSFNISKDGKILIVLGELSNSMTIYAIKNGYLIFKKKQLIGK NPLWILIE >Mature_328_residues MKKKILISCSNSKEVEYWILKKNYSLLKKQIISVKGTPQPLKFNKNKKLLYIGIKNPNKIITYKLSNNNIFKKKNEINIF NTPNYITLYKKKKILFCASYHGNGFIVFILNKNGLIKKKIYIFKKIIGCHSIKIFYKYKLIYITALKEDKIYIYKIKNIK NKIYLFLKNIIYTTKNSGPRHIIFHPIKNYLYSINELNGTIDVWNINNSSYLLILQQSISLIPKKYTNIPWSSEIHIHPN EKYLYACDRSNNIITFFIINKNTGHLSYIKSYKTEIQPRSFNISKDGKILIVLGELSNSMTIYAIKNGYLIFKKKQLIGK NPLWILIE
Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate [H]
COG id: COG2706
COG function: function code G; 3-carboxymuconate cyclase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cycloisomerase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1786983, Length=330, Percent_Identity=28.1818181818182, Blast_Score=213, Evalue=2e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022528 - InterPro: IPR019405 - InterPro: IPR015943 [H]
Pfam domain/function: PF10282 DUF2394 [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 38648; Mature: 38648
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKILISCSNSKEVEYWILKKNYSLLKKQIISVKGTPQPLKFNKNKKLLYIGIKNPNKI CCCEEEEEECCCCCEEEEEEECCHHHHHHHHEEECCCCCCEEECCCCEEEEEEECCCCEE ITYKLSNNNIFKKKNEINIFNTPNYITLYKKKKILFCASYHGNGFIVFILNKNGLIKKKI EEEEECCCCEEEECCCEEEEECCCEEEEEECCEEEEEEEECCCEEEEEEECCCCCEEHHH YIFKKIIGCHSIKIFYKYKLIYITALKEDKIYIYKIKNIKNKIYLFLKNIIYTTKNSGPR HHHHHHHCCEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCC HIIFHPIKNYLYSINELNGTIDVWNINNSSYLLILQQSISLIPKKYTNIPWSSEIHIHPN EEEEEEHHHHHEEEECCCCEEEEEEECCCCEEEEEECCHHHCCHHHCCCCCCCEEEECCC EKYLYACDRSNNIITFFIINKNTGHLSYIKSYKTEIQPRSFNISKDGKILIVLGELSNSM CEEEEEEECCCCEEEEEEEECCCCCCCEEEHHHHCCCCCEECCCCCCEEEEEEECCCCCE TIYAIKNGYLIFKKKQLIGKNPLWILIE EEEEEECCEEEEEEHHHCCCCCEEEEEC >Mature Secondary Structure MKKKILISCSNSKEVEYWILKKNYSLLKKQIISVKGTPQPLKFNKNKKLLYIGIKNPNKI CCCEEEEEECCCCCEEEEEEECCHHHHHHHHEEECCCCCCEEECCCCEEEEEEECCCCEE ITYKLSNNNIFKKKNEINIFNTPNYITLYKKKKILFCASYHGNGFIVFILNKNGLIKKKI EEEEECCCCEEEECCCEEEEECCCEEEEEECCEEEEEEEECCCEEEEEEECCCCCEEHHH YIFKKIIGCHSIKIFYKYKLIYITALKEDKIYIYKIKNIKNKIYLFLKNIIYTTKNSGPR HHHHHHHCCEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCC HIIFHPIKNYLYSINELNGTIDVWNINNSSYLLILQQSISLIPKKYTNIPWSSEIHIHPN EEEEEEHHHHHEEEECCCCEEEEEEECCCCEEEEEECCHHHCCHHHCCCCCCCEEEECCC EKYLYACDRSNNIITFFIINKNTGHLSYIKSYKTEIQPRSFNISKDGKILIVLGELSNSM CEEEEEEECCCCEEEEEEEECCCCCCCEEEHHHHCCCCCEECCCCCCEEEEEEECCCCCE TIYAIKNGYLIFKKKQLIGKNPLWILIE EEEEEECCEEEEEEHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA