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The map label for this gene is yciC [C]

Identifier: 116515109

GI number: 116515109

Start: 201623

End: 202375

Strand: Reverse

Name: yciC [C]

Synonym: BCc_173

Alternate gene names: 116515109

Gene position: 202375-201623 (Counterclockwise)

Preceding gene: 116515111

Following gene: 116515108

Centisome position: 48.6

GC content: 8.63

Gene sequence:

>753_bases
ATGATTTTTGAAATATATACTATAATTTATGATGCCTATAGATTTTTAAAAAATAATAAAATAAATATTTTATTACTATC
TATTTTTAGTACATTAATAAATTTCATCATATTAATTTTTTTTAACATAAAAAAAAAAAAATTATTAATTTTATATAATA
TTAATTATTTTAAAAAATTATCTTATTTAAATATAATTAACAGTATGAATAATAATCAAAAAAATATTATTTTTTACATA
AAAAGTATAAAAATAATTAGTTTTTTAATTTCTATTTTTTTTTTATATATATTTACTATTTATTTAATACAATCTATTTC
ATTTTCCATAAAAAAAAATTTATATATTATTCTTACTAAAATTTTACAAATTTTATTATTTTTATTTTTAATAATTTTTT
TTCAATTTTTTTCAATAAAAAATAATTTTTATAACTTTAAAATTTCTGAAATATTATCATATATTTTGTTTTCTTTTACT
CCTATAATTTTTTTAACAGAAAAAAAAAATATTTTTATTGCATTTAAAGATAGTATATTAATAATTAAAAAATATAAATT
AATTATTATTCCAATTATTTTAATATGGTTTATACTAAAATATTTAATTATGATTTTTTTTAAAAAAATACTTATATTTT
CAATATATAAAAATATTATATTTTTAAATATATGTAATAATATAATTTTTTCTTTTTTAATTATATGTTTATTTAGATTT
TATATGTTTGTAAAAATAAATAATATTTTGTAA

Upstream 100 bases:

>100_bases
TGCTAAAAAATTTATTAATAATAATATTTAATAATATTTCATAAAAAATAATTAATAATTAATTTAAAGTAAAAATTAAA
AATTTATATAAGGGAAATAC

Downstream 100 bases:

>100_bases
AATAAAATATAAATGAATTTAAATAAATATTTTTTATATAAGATTTATTTATAAATTAAAATATTTAAAAAATATTTTTA
TGACCAAATTAGTGAATAAA

Product: YciC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIFEIYTIIYDAYRFLKNNKINILLLSIFSTLINFIILIFFNIKKKKLLILYNINYFKKLSYLNIINSMNNNQKNIIFYI
KSIKIISFLISIFFLYIFTIYLIQSISFSIKKNLYIILTKILQILLFLFLIIFFQFFSIKNNFYNFKISEILSYILFSFT
PIIFLTEKKNIFIAFKDSILIIKKYKLIIIPIILIWFILKYLIMIFFKKILIFSIYKNIIFLNICNNIIFSFLIICLFRF
YMFVKINNIL

Sequences:

>Translated_250_residues
MIFEIYTIIYDAYRFLKNNKINILLLSIFSTLINFIILIFFNIKKKKLLILYNINYFKKLSYLNIINSMNNNQKNIIFYI
KSIKIISFLISIFFLYIFTIYLIQSISFSIKKNLYIILTKILQILLFLFLIIFFQFFSIKNNFYNFKISEILSYILFSFT
PIIFLTEKKNIFIAFKDSILIIKKYKLIIIPIILIWFILKYLIMIFFKKILIFSIYKNIIFLNICNNIIFSFLIICLFRF
YMFVKINNIL
>Mature_250_residues
MIFEIYTIIYDAYRFLKNNKINILLLSIFSTLINFIILIFFNIKKKKLLILYNINYFKKLSYLNIINSMNNNQKNIIFYI
KSIKIISFLISIFFLYIFTIYLIQSISFSIKKNLYIILTKILQILLFLFLIIFFQFFSIKNNFYNFKISEILSYILFSFT
PIIFLTEKKNIFIAFKDSILIIKKYKLIIIPIILIWFILKYLIMIFFKKILIFSIYKNIIFLNICNNIIFSFLIICLFRF
YMFVKINNIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0259 family [H]

Homologues:

Organism=Escherichia coli, GI1787508, Length=246, Percent_Identity=21.9512195121951, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009627 [H]

Pfam domain/function: PF06790 UPF0259 [H]

EC number: NA

Molecular weight: Translated: 30438; Mature: 30438

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFEIYTIIYDAYRFLKNNKINILLLSIFSTLINFIILIFFNIKKKKLLILYNINYFKKL
CEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHH
SYLNIINSMNNNQKNIIFYIKSIKIISFLISIFFLYIFTIYLIQSISFSIKKNLYIILTK
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ILQILLFLFLIIFFQFFSIKNNFYNFKISEILSYILFSFTPIIFLTEKKNIFIAFKDSIL
HHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCEEEEEECCCEEEEEECCEE
IIKKYKLIIIPIILIWFILKYLIMIFFKKILIFSIYKNIIFLNICNNIIFSFLIICLFRF
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMFVKINNIL
HHHHHHHCCC
>Mature Secondary Structure
MIFEIYTIIYDAYRFLKNNKINILLLSIFSTLINFIILIFFNIKKKKLLILYNINYFKKL
CEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHH
SYLNIINSMNNNQKNIIFYIKSIKIISFLISIFFLYIFTIYLIQSISFSIKKNLYIILTK
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ILQILLFLFLIIFFQFFSIKNNFYNFKISEILSYILFSFTPIIFLTEKKNIFIAFKDSIL
HHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCEEEEEECCCEEEEEECCEE
IIKKYKLIIIPIILIWFILKYLIMIFFKKILIFSIYKNIIFLNICNNIIFSFLIICLFRF
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMFVKINNIL
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA