Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is ilvH [H]
Identifier: 116515078
GI number: 116515078
Start: 162839
End: 163321
Strand: Reverse
Name: ilvH [H]
Synonym: BCc_138
Alternate gene names: 116515078
Gene position: 163321-162839 (Counterclockwise)
Preceding gene: 116515079
Following gene: 116515077
Centisome position: 39.22
GC content: 20.7
Gene sequence:
>483_bases ATGCGCAGAATTTTATCAATATTATTAGAAAATGAATCAGGTGCATTATCACGAGTAGTAGGACTTTTTTCACAAAGAGG ATATAATATAGATAGTCTATCAGTTGCTCCGACTAATAAAAAAAATATATCAAAATTAACAATTCAAACTTTTGGAAATA AAAAAACTATTGAACAAATTGAAAAACAACTTCATAAATTAATTGATGTATACCAAGTATTGGAAATAACAAATAAAAAT TATATTGAAAGAGAAATTCTATTAATAAAAATTCAGATAAATAATCTAAAAAAATTGCATAAAATAAATCAAATTATAGA AATATATAAAGGTAATATTATTGATTGTTCTTCAGAACAATATATTATTCAAATATCAGATACAAATAGAAATATTGATT CTTTTTTAAATATTGCAAAAAAATCTTTTAAAATTATTGAATTATCAAGATCTGGTGTTATAGGTATCAGTTGTTATCAA TAA
Upstream 100 bases:
>100_bases TGATATTAATATTGATCCATATGAACATGTTTATCCTATGCAAATAAAAAACGGTGGTATGAACGAAATGTTATTAAAAA AAACAGGATAATTTAAATAT
Downstream 100 bases:
>100_bases GAAAAATATTTTTTAATAAATTAAAAATTAAATTTTTAAAAATTAATAAACAAAACTTTTATACATTTTCTATTAAATTT TAAAAATTATTTTTTAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Acetohydroxy-acid synthase small subunit; AHAS; ALS [H]
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MRRILSILLENESGALSRVVGLFSQRGYNIDSLSVAPTNKKNISKLTIQTFGNKKTIEQIEKQLHKLIDVYQVLEITNKN YIEREILLIKIQINNLKKLHKINQIIEIYKGNIIDCSSEQYIIQISDTNRNIDSFLNIAKKSFKIIELSRSGVIGISCYQ
Sequences:
>Translated_160_residues MRRILSILLENESGALSRVVGLFSQRGYNIDSLSVAPTNKKNISKLTIQTFGNKKTIEQIEKQLHKLIDVYQVLEITNKN YIEREILLIKIQINNLKKLHKINQIIEIYKGNIIDCSSEQYIIQISDTNRNIDSFLNIAKKSFKIIELSRSGVIGISCYQ >Mature_160_residues MRRILSILLENESGALSRVVGLFSQRGYNIDSLSVAPTNKKNISKLTIQTFGNKKTIEQIEKQLHKLIDVYQVLEITNKN YIEREILLIKIQINNLKKLHKINQIIEIYKGNIIDCSSEQYIIQISDTNRNIDSFLNIAKKSFKIIELSRSGVIGISCYQ
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0440
COG function: function code E; Acetolactate synthase, small (regulatory) subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1786266, Length=157, Percent_Identity=53.5031847133758, Blast_Score=181, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6319837, Length=204, Percent_Identity=26.9607843137255, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004789 - InterPro: IPR019455 - InterPro: IPR002912 [H]
Pfam domain/function: PF01842 ACT; PF10369 ALS_ss_C [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 18397; Mature: 18397
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRILSILLENESGALSRVVGLFSQRGYNIDSLSVAPTNKKNISKLTIQTFGNKKTIEQI CHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHH EKQLHKLIDVYQVLEITNKNYIEREILLIKIQINNLKKLHKINQIIEIYKGNIIDCSSEQ HHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCEEECCCCE YIIQISDTNRNIDSFLNIAKKSFKIIELSRSGVIGISCYQ EEEEEECCCCCHHHHHHHHHHCEEEEEECCCCEEEEEECC >Mature Secondary Structure MRRILSILLENESGALSRVVGLFSQRGYNIDSLSVAPTNKKNISKLTIQTFGNKKTIEQI CHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHHHH EKQLHKLIDVYQVLEITNKNYIEREILLIKIQINNLKKLHKINQIIEIYKGNIIDCSSEQ HHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCEEECCCCE YIIQISDTNRNIDSFLNIAKKSFKIIELSRSGVIGISCYQ EEEEEECCCCCHHHHHHHHHHCEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9688822; 12089438 [H]