Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is ilvI [H]
Identifier: 116515079
GI number: 116515079
Start: 163331
End: 165055
Strand: Reverse
Name: ilvI [H]
Synonym: BCc_139
Alternate gene names: 116515079
Gene position: 165055-163331 (Counterclockwise)
Preceding gene: 116515080
Following gene: 116515078
Centisome position: 39.64
GC content: 26.55
Gene sequence:
>1725_bases ATGACATTATTATCTGGTGCCGAAATGGTTGTTCAATCATTAATGAACTTAAAAATAAAAAAAATATTTGGTTATCCAGG AGGGGCTGTTTTAGATATTTATGACGCAATTCATACATTAGGTAAAAAAAAAATACAGCATATTTTAGTACGTCATGAAC AAGCAGCTGTACATATGGCAGATGGATACGCACGATGTACTGGAAAAATCGGAGTTGTTTTAGTTACTTCAGGTCCTGGA GCTACAAATGCAATTACTGGAATTGCTACTGCATACATGGATTCTATACCATTATTAATAATATCAGGACAAGTATCTTC AAAATTAATTGGTTTTGATGCATTTCAAGAATGTGACATGATAGGTATTTCTCGACCTATTGTAAAACATAGTTTTTTAG TAAAAAAATCTGAGAATATTCCTTTAATTTTTCAAAAATCGTATTTTTTAGCAACTAACGGAAGGCCTGGACCAATAGTA ATTGATTTACCAAAAAATATTTTAGATCATAAAATAAAAAAAAAATATATTTGGGAAAATACAATTAATATTAAATCTTA TAAAAACAACATAAAAAAAAATAAAAAAAATATAAAAAATGCATTAAATTTTTTATTAAAATCTAAAAAACCAATTATAT ATGCTGGAGGAGGAATTATAAGCTCTAATAGTCACTCAGAATTATATAATTTAGCAACAAAATTAAATATACCAGTAACA ATGTCTCTTATGTCATTAGGTTCTTTTCCTAGTAATCATCCACAAAATTTATCTATGTTAGGTATGCACGGAACTTATGA AGCTAATATGGCTATGCATCATTCTGATATAATTCTAGCTATTGGAGTTAGATTTGATGATAGAACTACAAATAATGTAG ATAAATATTGTCCAAATGCAAAAATAATACATATTGATATTGATCCTACATCAATTTCTAAAACAATAACAGCAGATATT CCTATTATTGGAGATGCTAAAAAAATACTAAAAAAAATGTTATTATTATTAGAAAAAAAAGAAAAAAAAAGATCAAACTC TTATTTAAATAATTGGTGGAAAAAAATACAAAAATGGAAAAATTATAAATTTAATAAATATAAAAATTCTAATAAAATAA TTAAACCACAATATATCCTTCAAATACTACATAAATTAACAGAAGGAAAAGCATATATTACATCAGACGTAGGGCAACAT CAAATGTTTGCTGCATTATATTATGGTTTTAATAAACCCCGTCATTGGATTAACTCAGGAGGGTTAGGTACAATGGGATT TGGATTACCGGCTGCTCTAGGAGTAAAAATTGCACATCCTAAAAAATTTGTAATATGTGTTACTGGAGATGGTAGTATAC AAATGAACATACAAGAATTATCAACAGCAAAACAATATAATTTAGCAATATTAATTATTAATTTAAATAATCAATCACTA GGAATGGTAAAACAATGGCAAGACATGATTTATTCAGGTAGACACTCTCATTCATACATGCAATCATTACCTAACTTTAT AAAACTAGCTAAAGCATATGGACATATTGGAATAAAAATAAAAAAACCAAAAGAAATAATCTCTAAATTAATATTAGCGA TTAAACAGGTTCAATCTGGATCACTAGTTTTTGTTGATATTAATATTGATCCATATGAACATGTTTATCCTATGCAAATA AAAAACGGTGGTATGAACGAAATGTTATTAAAAAAAACAGGATAA
Upstream 100 bases:
>100_bases AAATTTTTTATTTATAATTAAATTATAAAAAATATATTAATTATAAATATATATATTAAATTATTAAATAAATACTAATT ATATAGGGATTACATACAAT
Downstream 100 bases:
>100_bases TTTAAATATATGCGCAGAATTTTATCAATATTATTAGAAAATGAATCAGGTGCATTATCACGAGTAGTAGGACTTTTTTC ACAAAGAGGATATAATATAG
Product: IlvI
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 574; Mature: 573
Protein sequence:
>574_residues MTLLSGAEMVVQSLMNLKIKKIFGYPGGAVLDIYDAIHTLGKKKIQHILVRHEQAAVHMADGYARCTGKIGVVLVTSGPG ATNAITGIATAYMDSIPLLIISGQVSSKLIGFDAFQECDMIGISRPIVKHSFLVKKSENIPLIFQKSYFLATNGRPGPIV IDLPKNILDHKIKKKYIWENTINIKSYKNNIKKNKKNIKNALNFLLKSKKPIIYAGGGIISSNSHSELYNLATKLNIPVT MSLMSLGSFPSNHPQNLSMLGMHGTYEANMAMHHSDIILAIGVRFDDRTTNNVDKYCPNAKIIHIDIDPTSISKTITADI PIIGDAKKILKKMLLLLEKKEKKRSNSYLNNWWKKIQKWKNYKFNKYKNSNKIIKPQYILQILHKLTEGKAYITSDVGQH QMFAALYYGFNKPRHWINSGGLGTMGFGLPAALGVKIAHPKKFVICVTGDGSIQMNIQELSTAKQYNLAILIINLNNQSL GMVKQWQDMIYSGRHSHSYMQSLPNFIKLAKAYGHIGIKIKKPKEIISKLILAIKQVQSGSLVFVDINIDPYEHVYPMQI KNGGMNEMLLKKTG
Sequences:
>Translated_574_residues MTLLSGAEMVVQSLMNLKIKKIFGYPGGAVLDIYDAIHTLGKKKIQHILVRHEQAAVHMADGYARCTGKIGVVLVTSGPG ATNAITGIATAYMDSIPLLIISGQVSSKLIGFDAFQECDMIGISRPIVKHSFLVKKSENIPLIFQKSYFLATNGRPGPIV IDLPKNILDHKIKKKYIWENTINIKSYKNNIKKNKKNIKNALNFLLKSKKPIIYAGGGIISSNSHSELYNLATKLNIPVT MSLMSLGSFPSNHPQNLSMLGMHGTYEANMAMHHSDIILAIGVRFDDRTTNNVDKYCPNAKIIHIDIDPTSISKTITADI PIIGDAKKILKKMLLLLEKKEKKRSNSYLNNWWKKIQKWKNYKFNKYKNSNKIIKPQYILQILHKLTEGKAYITSDVGQH QMFAALYYGFNKPRHWINSGGLGTMGFGLPAALGVKIAHPKKFVICVTGDGSIQMNIQELSTAKQYNLAILIINLNNQSL GMVKQWQDMIYSGRHSHSYMQSLPNFIKLAKAYGHIGIKIKKPKEIISKLILAIKQVQSGSLVFVDINIDPYEHVYPMQI KNGGMNEMLLKKTG >Mature_573_residues TLLSGAEMVVQSLMNLKIKKIFGYPGGAVLDIYDAIHTLGKKKIQHILVRHEQAAVHMADGYARCTGKIGVVLVTSGPGA TNAITGIATAYMDSIPLLIISGQVSSKLIGFDAFQECDMIGISRPIVKHSFLVKKSENIPLIFQKSYFLATNGRPGPIVI DLPKNILDHKIKKKYIWENTINIKSYKNNIKKNKKNIKNALNFLLKSKKPIIYAGGGIISSNSHSELYNLATKLNIPVTM SLMSLGSFPSNHPQNLSMLGMHGTYEANMAMHHSDIILAIGVRFDDRTTNNVDKYCPNAKIIHIDIDPTSISKTITADIP IIGDAKKILKKMLLLLEKKEKKRSNSYLNNWWKKIQKWKNYKFNKYKNSNKIIKPQYILQILHKLTEGKAYITSDVGQHQ MFAALYYGFNKPRHWINSGGLGTMGFGLPAALGVKIAHPKKFVICVTGDGSIQMNIQELSTAKQYNLAILIINLNNQSLG MVKQWQDMIYSGRHSHSYMQSLPNFIKLAKAYGHIGIKIKKPKEIISKLILAIKQVQSGSLVFVDINIDPYEHVYPMQIK NGGMNEMLLKKTG
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=575, Percent_Identity=25.3913043478261, Blast_Score=179, Evalue=8e-45, Organism=Homo sapiens, GI21361361, Length=589, Percent_Identity=22.4108658743633, Blast_Score=151, Evalue=2e-36, Organism=Escherichia coli, GI87081685, Length=573, Percent_Identity=64.0488656195462, Blast_Score=822, Evalue=0.0, Organism=Escherichia coli, GI1790104, Length=567, Percent_Identity=37.2134038800705, Blast_Score=408, Evalue=1e-115, Organism=Escherichia coli, GI1786717, Length=521, Percent_Identity=33.3973128598848, Blast_Score=306, Evalue=2e-84, Organism=Escherichia coli, GI1787096, Length=555, Percent_Identity=26.1261261261261, Blast_Score=181, Evalue=1e-46, Organism=Escherichia coli, GI1788716, Length=567, Percent_Identity=22.0458553791887, Blast_Score=155, Evalue=6e-39, Organism=Caenorhabditis elegans, GI17542570, Length=585, Percent_Identity=23.7606837606838, Blast_Score=143, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17531299, Length=577, Percent_Identity=24.9566724436742, Blast_Score=142, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17531301, Length=577, Percent_Identity=24.9566724436742, Blast_Score=141, Evalue=9e-34, Organism=Saccharomyces cerevisiae, GI6323755, Length=588, Percent_Identity=39.4557823129252, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6320816, Length=486, Percent_Identity=25.7201646090535, Blast_Score=127, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6323163, Length=495, Percent_Identity=23.030303030303, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI19922626, Length=498, Percent_Identity=26.1044176706827, Blast_Score=185, Evalue=9e-47,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 64189; Mature: 64057
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLSGAEMVVQSLMNLKIKKIFGYPGGAVLDIYDAIHTLGKKKIQHILVRHEQAAVHMA CCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC DGYARCTGKIGVVLVTSGPGATNAITGIATAYMDSIPLLIISGQVSSKLIGFDAFQECDM CCCEEECCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEECCHHHHHCCC IGISRPIVKHSFLVKKSENIPLIFQKSYFLATNGRPGPIVIDLPKNILDHKIKKKYIWEN CCCCCCHHHHHEEEECCCCCCEEEECCEEEEECCCCCCEEEECCHHHHHHHHHHHHHCCC TINIKSYKNNIKKNKKNIKNALNFLLKSKKPIIYAGGGIISSNSHSELYNLATKLNIPVT CEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCHHHHHHHHHHCCCCEE MSLMSLGSFPSNHPQNLSMLGMHGTYEANMAMHHSDIILAIGVRFDDRTTNNVDKYCPNA EEHHHHCCCCCCCCCCCEEEECCCCEECCEEEECCCEEEEEEEEECCCCCCCHHHHCCCC KIIHIDIDPTSISKTITADIPIIGDAKKILKKMLLLLEKKEKKRSNSYLNNWWKKIQKWK EEEEEECCCCCCCCEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NYKFNKYKNSNKIIKPQYILQILHKLTEGKAYITSDVGQHQMFAALYYGFNKPRHWINSG CCCCCEECCCCCEECHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCHHHCCC GLGTMGFGLPAALGVKIAHPKKFVICVTGDGSIQMNIQELSTAKQYNLAILIINLNNQSL CCCCCCCCCHHHHCEEEECCCEEEEEEECCCCEEEEHHHHHCCCCCEEEEEEEEECCCCC GMVKQWQDMIYSGRHSHSYMQSLPNFIKLAKAYGHIGIKIKKPKEIISKLILAIKQVQSG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHCCCC SLVFVDINIDPYEHVYPMQIKNGGMNEMLLKKTG CEEEEEECCCCCCCEEEEEECCCCCCCEEEECCC >Mature Secondary Structure TLLSGAEMVVQSLMNLKIKKIFGYPGGAVLDIYDAIHTLGKKKIQHILVRHEQAAVHMA CCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC DGYARCTGKIGVVLVTSGPGATNAITGIATAYMDSIPLLIISGQVSSKLIGFDAFQECDM CCCEEECCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEECCHHHHHCCC IGISRPIVKHSFLVKKSENIPLIFQKSYFLATNGRPGPIVIDLPKNILDHKIKKKYIWEN CCCCCCHHHHHEEEECCCCCCEEEECCEEEEECCCCCCEEEECCHHHHHHHHHHHHHCCC TINIKSYKNNIKKNKKNIKNALNFLLKSKKPIIYAGGGIISSNSHSELYNLATKLNIPVT CEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCHHHHHHHHHHCCCCEE MSLMSLGSFPSNHPQNLSMLGMHGTYEANMAMHHSDIILAIGVRFDDRTTNNVDKYCPNA EEHHHHCCCCCCCCCCCEEEECCCCEECCEEEECCCEEEEEEEEECCCCCCCHHHHCCCC KIIHIDIDPTSISKTITADIPIIGDAKKILKKMLLLLEKKEKKRSNSYLNNWWKKIQKWK EEEEEECCCCCCCCEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NYKFNKYKNSNKIIKPQYILQILHKLTEGKAYITSDVGQHQMFAALYYGFNKPRHWINSG CCCCCEECCCCCEECHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCHHHCCC GLGTMGFGLPAALGVKIAHPKKFVICVTGDGSIQMNIQELSTAKQYNLAILIINLNNQSL CCCCCCCCCHHHHCEEEECCCEEEEEEECCCCEEEEHHHHHCCCCCEEEEEEEEECCCCC GMVKQWQDMIYSGRHSHSYMQSLPNFIKLAKAYGHIGIKIKKPKEIISKLILAIKQVQSG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHCCCC SLVFVDINIDPYEHVYPMQIKNGGMNEMLLKKTG CEEEEEECCCCCCCEEEEEECCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9688822; 12089438 [H]