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The map label for this gene is yadR

Identifier: 116515074

GI number: 116515074

Start: 158292

End: 158627

Strand: Reverse

Name: yadR

Synonym: BCc_134

Alternate gene names: 116515074

Gene position: 158627-158292 (Counterclockwise)

Preceding gene: 116515075

Following gene: 116515068

Centisome position: 38.1

GC content: 20.24

Gene sequence:

>336_bases
ATGTTAAAACATCAAATAAAAATTACTATTAATGCAATAAAAAAAATCAAAAAATTATTATTAAAAAAAAAAAATTTTAA
ATTGAAATTAAGAATATTTATTACTGGTGGAGGATGTAGTGGTTTTCAATATGGTTTTGAATTAGAAAAAATAACAAAAA
AAAATGATATATCTATTATACAATCAGGAATAGAAATTATTATTGATCCTATTAGTATACAATACTTATTAGGAGGAAAA
ATAGATTATATTGAAAATTTAGAAGGATCTAAATTTGTTATTAGTAATCCAAATGCTAAAAGAACTTGCGGGTGCGGATT
ATCATTTAGTATATAA

Upstream 100 bases:

>100_bases
TTATATAAAATTTTTATACAAACCATTTAATAATATAAATCATCTTTTTCTTTCAAAATAATATTAAATAAAAATTAATA
AAAATAGAGTTTATATAAAC

Downstream 100 bases:

>100_bases
TTTAAAGAATTAATCTAAATTCTATAATTTATATAGATAAAATTTATATGATATACAAAATATATTATATACTAAATTCG
TTTTAGAGCAGGAAAATGAC

Product: YadR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MLKHQIKITINAIKKIKKLLLKKKNFKLKLRIFITGGGCSGFQYGFELEKITKKNDISIIQSGIEIIIDPISIQYLLGGK
IDYIENLEGSKFVISNPNAKRTCGCGLSFSI

Sequences:

>Translated_111_residues
MLKHQIKITINAIKKIKKLLLKKKNFKLKLRIFITGGGCSGFQYGFELEKITKKNDISIIQSGIEIIIDPISIQYLLGGK
IDYIENLEGSKFVISNPNAKRTCGCGLSFSI
>Mature_111_residues
MLKHQIKITINAIKKIKKLLLKKKNFKLKLRIFITGGGCSGFQYGFELEKITKKNDISIIQSGIEIIIDPISIQYLLGGK
IDYIENLEGSKFVISNPNAKRTCGCGLSFSI

Specific function: Required for insertion of 4Fe-4S clusters for at least ispG

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family

Homologues:

Organism=Homo sapiens, GI52426768, Length=109, Percent_Identity=37.6146788990826, Blast_Score=80, Evalue=4e-16,
Organism=Homo sapiens, GI160420328, Length=108, Percent_Identity=36.1111111111111, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=52.8301886792453, Blast_Score=135, Evalue=7e-34,
Organism=Escherichia coli, GI1788877, Length=108, Percent_Identity=30.5555555555556, Blast_Score=64, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25146411, Length=109, Percent_Identity=38.5321100917431, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193209025, Length=110, Percent_Identity=38.1818181818182, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71998452, Length=113, Percent_Identity=33.6283185840708, Blast_Score=78, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=36.7924528301887, Blast_Score=70, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24649697, Length=107, Percent_Identity=32.7102803738318, Blast_Score=77, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24642263, Length=109, Percent_Identity=34.8623853211009, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ERPA_BUCCC (Q057T9)

Other databases:

- EMBL:   CP000263
- RefSeq:   YP_802703.1
- ProteinModelPortal:   Q057T9
- SMR:   Q057T9
- STRING:   Q057T9
- EnsemblBacteria:   EBBUCT00000001306
- GeneID:   4440875
- GenomeReviews:   CP000263_GR
- KEGG:   bcc:BCc_134
- eggNOG:   COG0316
- GeneTree:   EBGT00050000008089
- HOGENOM:   HBG730174
- BioCyc:   BAPH372461:BCC_134-MONOMER
- HAMAP:   MF_01380
- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870
- InterPro:   IPR023063
- Gene3D:   G3DSA:2.60.300.12
- PANTHER:   PTHR10072
- TIGRFAMs:   TIGR00049

Pfam domain/function: PF01521 Fe-S_biosyn; SSF89360 HesB_yadR_yfhF-like

EC number: NA

Molecular weight: Translated: 12433; Mature: 12433

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKHQIKITINAIKKIKKLLLKKKNFKLKLRIFITGGGCSGFQYGFELEKITKKNDISII
CCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHH
QSGIEIIIDPISIQYLLGGKIDYIENLEGSKFVISNPNAKRTCGCGLSFSI
HCCEEEEECCEEEEEEECCCCCEEECCCCCEEEEECCCCCCEECCCEEECC
>Mature Secondary Structure
MLKHQIKITINAIKKIKKLLLKKKNFKLKLRIFITGGGCSGFQYGFELEKITKKNDISII
CCCEEEEEEHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHH
QSGIEIIIDPISIQYLLGGKIDYIENLEGSKFVISNPNAKRTCGCGLSFSI
HCCEEEEECCEEEEEEECCCCCEEECCCCCEEEEECCCCCCEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA