Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is ftsZ [H]
Identifier: 116515075
GI number: 116515075
Start: 158816
End: 159976
Strand: Reverse
Name: ftsZ [H]
Synonym: BCc_135
Alternate gene names: 116515075
Gene position: 159976-158816 (Counterclockwise)
Preceding gene: 116515076
Following gene: 116515074
Centisome position: 38.42
GC content: 32.21
Gene sequence:
>1161_bases ATGTTTGAACCTTCAGAATTAAGTAATGATGCGGTTATTAAAGTAATTGGTGTTGGTGGCGGTGGAAGTAATGCAGTAGA ACATATGGTCCGTGAAAAAATTGAAGGTGTCGAATTTTTTGCAATTAATACAGATGCACAGGCATTAAGAAAAATAGCTG TTGGACAAACAATCCAAATTGGAAATAATATTACAAAAGGTTTAGGAGCTGGAGCAAATCCTGATGTAGGTAAAAATTCT GCAGAAGAAGATAAAGAAACATTAAAATCAGCATTAGAAGGAGCTGATATGGTGTTTATAGCTGCAGGAATGGGAGGTGG TACAGGAACAGGAGCTGCTCCAGTAGTAGCAGAAGTTGCAAAAGAATTAGGTATATTAACTGTTGCTGTAGTTACAAAAC CTTTTACTTTTGAGGGAAAAAAAAGAATGAACTTTGCTGAACAAGGATTAAATGAATTATCGAAATATGTTGACTCATTA ATAACTATACCTAATGATAAATTATTAAAAGTATTAACACGTGGAATATCATTATTAGATGCTTTTGGGGCAGCAAATGA TGTTTTAAAAGGAGCTGTTCAAGGAATTGCAGAACTAATAACGCGACCTGGACTAATGAATGTGGATTTTGCAGATGTTC GAACAGTTATGTCAGAAATGGGATATGCAATGATGGGAACAGGATCAGCCTCCGGAGAAAATAGAGCAGAAGAAGCTTCA GAAATAGCAATATCAAGTCCGTTACTAGAAGATATAGATCTATCGGGAGCAAGAGGAGTATTAGTAAATATTACCGCAGG TTTTGATTTACGACTTGATGAATTTGAAACAGTAGGTAATACAATTAGAGCGTTTTCCTCTGATAATGCTACAGTTGTAA TTGGAACATCATTAGACCCTCAAATGGATCACTCATTACGAGTGACAGTAGTAGCTACAGGAATTGGAATGGAAAAAAGA TCTGAAATTTCCTTTATACGTAATAAATCTTCTAAAGAAGCATTTGTAGATTATCGAAATAATAATTTAAGAAGAAATGG AATACTAGATAATTCAAATACTATAAAAAAAAATATAAATAATAATATTAATTCAATAAAAAAAGAAAAAAAAAATTTTT TAGATATTCCAGCATTTTTAAGAAAAAAAATAGATAAATAA
Upstream 100 bases:
>100_bases TTATAAAAAATATTAAATATTGGTTAACACATTAAATATAAAATATAATAAAAAATTAATATAACAATTTGAACTATTCC AATTTTACGGAGTTTATTGT
Downstream 100 bases:
>100_bases CTAAAAACCTTTTCAAACAAAAGACATAAATTTTAAAAATATTAAATTATTAATTTAATATACATAAATATACAAAAATC ATCTGTTTTTATATAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MFEPSELSNDAVIKVIGVGGGGSNAVEHMVREKIEGVEFFAINTDAQALRKIAVGQTIQIGNNITKGLGAGANPDVGKNS AEEDKETLKSALEGADMVFIAAGMGGGTGTGAAPVVAEVAKELGILTVAVVTKPFTFEGKKRMNFAEQGLNELSKYVDSL ITIPNDKLLKVLTRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMSEMGYAMMGTGSASGENRAEEAS EIAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFETVGNTIRAFSSDNATVVIGTSLDPQMDHSLRVTVVATGIGMEKR SEISFIRNKSSKEAFVDYRNNNLRRNGILDNSNTIKKNINNNINSIKKEKKNFLDIPAFLRKKIDK
Sequences:
>Translated_386_residues MFEPSELSNDAVIKVIGVGGGGSNAVEHMVREKIEGVEFFAINTDAQALRKIAVGQTIQIGNNITKGLGAGANPDVGKNS AEEDKETLKSALEGADMVFIAAGMGGGTGTGAAPVVAEVAKELGILTVAVVTKPFTFEGKKRMNFAEQGLNELSKYVDSL ITIPNDKLLKVLTRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMSEMGYAMMGTGSASGENRAEEAS EIAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFETVGNTIRAFSSDNATVVIGTSLDPQMDHSLRVTVVATGIGMEKR SEISFIRNKSSKEAFVDYRNNNLRRNGILDNSNTIKKNINNNINSIKKEKKNFLDIPAFLRKKIDK >Mature_386_residues MFEPSELSNDAVIKVIGVGGGGSNAVEHMVREKIEGVEFFAINTDAQALRKIAVGQTIQIGNNITKGLGAGANPDVGKNS AEEDKETLKSALEGADMVFIAAGMGGGTGTGAAPVVAEVAKELGILTVAVVTKPFTFEGKKRMNFAEQGLNELSKYVDSL ITIPNDKLLKVLTRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMSEMGYAMMGTGSASGENRAEEAS EIAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFETVGNTIRAFSSDNATVVIGTSLDPQMDHSLRVTVVATGIGMEKR SEISFIRNKSSKEAFVDYRNNNLRRNGILDNSNTIKKNINNNINSIKKEKKNFLDIPAFLRKKIDK
Specific function: This protein is essential to the cell-division process. It seems to assemble into a dynamic ring on the inner surface of the cytoplasmic membrane at the place where division will occur, and the formation of the ring is the signal for septation to begin. B
COG id: COG0206
COG function: function code D; Cell division GTPase
Gene ontology:
Cell location: Cytoplasm. Note=Assembles at the inner surface of the cytoplasmic membrane (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsZ family [H]
Homologues:
Organism=Escherichia coli, GI1786284, Length=386, Percent_Identity=79.2746113989637, Blast_Score=553, Evalue=1e-159,
Paralogues:
None
Copy number: 320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020805 - InterPro: IPR000158 - InterPro: IPR008280 - InterPro: IPR018316 - InterPro: IPR003008 [H]
Pfam domain/function: PF00091 Tubulin [H]
EC number: NA
Molecular weight: Translated: 41158; Mature: 41158
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS01134 FTSZ_1 ; PS01135 FTSZ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEPSELSNDAVIKVIGVGGGGSNAVEHMVREKIEGVEFFAINTDAQALRKIAVGQTIQI CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCEEEE GNNITKGLGAGANPDVGKNSAEEDKETLKSALEGADMVFIAAGMGGGTGTGAAPVVAEVA CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHH KELGILTVAVVTKPFTFEGKKRMNFAEQGLNELSKYVDSLITIPNDKLLKVLTRGISLLD HHHCEEEEEEEECCCEECCHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMSEMGYAMMGTGSASGENRAEEAS HHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHH EIAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFETVGNTIRAFSSDNATVVIGTSLDP HHHHCCCCHHHCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCC QMDHSLRVTVVATGIGMEKRSEISFIRNKSSKEAFVDYRNNNLRRNGILDNSNTIKKNIN CCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCHHHHEECCCCCEECCCCCCCCHHHHHHC NNINSIKKEKKNFLDIPAFLRKKIDK CHHHHHHHHHHHCCCCHHHHHHHCCC >Mature Secondary Structure MFEPSELSNDAVIKVIGVGGGGSNAVEHMVREKIEGVEFFAINTDAQALRKIAVGQTIQI CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCEEEE GNNITKGLGAGANPDVGKNSAEEDKETLKSALEGADMVFIAAGMGGGTGTGAAPVVAEVA CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHH KELGILTVAVVTKPFTFEGKKRMNFAEQGLNELSKYVDSLITIPNDKLLKVLTRGISLLD HHHCEEEEEEEECCCEECCHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMSEMGYAMMGTGSASGENRAEEAS HHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHH EIAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFETVGNTIRAFSSDNATVVIGTSLDP HHHHCCCCHHHCCCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCC QMDHSLRVTVVATGIGMEKRSEISFIRNKSSKEAFVDYRNNNLRRNGILDNSNTIKKNIN CCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCHHHHEECCCCCEECCCCCCCCHHHHHHC NNINSIKKEKKNFLDIPAFLRKKIDK CHHHHHHHHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]