Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is hisA
Identifier: 116515010
GI number: 116515010
Start: 75151
End: 75888
Strand: Direct
Name: hisA
Synonym: BCc_068
Alternate gene names: 116515010
Gene position: 75151-75888 (Clockwise)
Preceding gene: 116515009
Following gene: 116515011
Centisome position: 18.05
GC content: 22.63
Gene sequence:
>738_bases ATGATTATTCCATCATTAGATTTTATTCATGGCAAAATTGTACGATTATATCAGGGAAATTATAATAATAAAATATCTTA TAAGAAAGATATATTTAAACAAATTGAGAAATATATATATCAGGGAGCTACATATATACATTTAGTTGACTTAGATGGAT GTAATAATCCAGAAAATCGACAAAAAAGCATGTTTAATATTTTTTCTAATTTTAAGAATGTTTCTTTTCAAGTTGGTGGT GGTATTCGTTCAAAAAGAGATATAGAAAATTTATTTCATGCTGGAGTTTCTAAAATTGTTATTGGAACTTCTGCAATTTT ATATCCTAATAAATTTAAAAAATGGTTAAAAAATTACGGTTCTAAAAATTTTGTTTTATCTGTTGATATTAATATCAATA CAAAAAAAGAAAATAAAATAGCTATTCAAGGATGGAAAAAAACTACTGAAATTAATTTAGATGATGCAATTAAACAATTT ATACCATATGGTTTAAAAAATATTTTATGTACTGATATTTCAAGAGATGGAACTTTTTCAGGTCCTAATATATCATTATA TAAGTATTTAAAAAATAAATTTCCAAATATTGTTTTACAATCATCTGGAGGAATAAATTCTATTTCTGATATATATAATT TAAAAAAAAATAATGTTGAACATGTTATTGTTGGTCGAGCGTTATTAGAAAACAAATTTACTTTTTTGGAGGCAAGTAAA TGTTGGCTAAAAGAATAA
Upstream 100 bases:
>100_bases TCTATAGCAATAAATAATTTTTTTGGTGTACAATTTCATCCTGAAAAATCAGGAATTCCTGGAGAACAATTAATTAAAAA TTTTTTAGAGATATAAATAT
Downstream 100 bases:
>100_bases TTGCATGTTTAGATGTTAAAAATGGAAAAGTGGTTAAAGGTATTAAATTTCGTAATCAAATTATTATAGGAGAAATTTTA GATTTAGCAGAATATTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MIIPSLDFIHGKIVRLYQGNYNNKISYKKDIFKQIEKYIYQGATYIHLVDLDGCNNPENRQKSMFNIFSNFKNVSFQVGG GIRSKRDIENLFHAGVSKIVIGTSAILYPNKFKKWLKNYGSKNFVLSVDININTKKENKIAIQGWKKTTEINLDDAIKQF IPYGLKNILCTDISRDGTFSGPNISLYKYLKNKFPNIVLQSSGGINSISDIYNLKKNNVEHVIVGRALLENKFTFLEASK CWLKE
Sequences:
>Translated_245_residues MIIPSLDFIHGKIVRLYQGNYNNKISYKKDIFKQIEKYIYQGATYIHLVDLDGCNNPENRQKSMFNIFSNFKNVSFQVGG GIRSKRDIENLFHAGVSKIVIGTSAILYPNKFKKWLKNYGSKNFVLSVDININTKKENKIAIQGWKKTTEINLDDAIKQF IPYGLKNILCTDISRDGTFSGPNISLYKYLKNKFPNIVLQSSGGINSISDIYNLKKNNVEHVIVGRALLENKFTFLEASK CWLKE >Mature_245_residues MIIPSLDFIHGKIVRLYQGNYNNKISYKKDIFKQIEKYIYQGATYIHLVDLDGCNNPENRQKSMFNIFSNFKNVSFQVGG GIRSKRDIENLFHAGVSKIVIGTSAILYPNKFKKWLKNYGSKNFVLSVDININTKKENKIAIQGWKKTTEINLDDAIKQF IPYGLKNILCTDISRDGTFSGPNISLYKYLKNKFPNIVLQSSGGINSISDIYNLKKNNVEHVIVGRALLENKFTFLEASK CWLKE
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=242, Percent_Identity=42.5619834710744, Blast_Score=246, Evalue=9e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_BUCCC (Q058A3)
Other databases:
- EMBL: CP000263 - RefSeq: YP_802639.1 - ProteinModelPortal: Q058A3 - SMR: Q058A3 - STRING: Q058A3 - EnsemblBacteria: EBBUCT00000001365 - GeneID: 4440772 - GenomeReviews: CP000263_GR - KEGG: bcc:BCc_068 - eggNOG: COG0106 - GeneTree: EBGT00050000007994 - HOGENOM: HBG541613 - OMA: SIIYTDI - BioCyc: BAPH372461:BCC_068-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 28079; Mature: 28079
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: ACT_SITE 7-7 ACT_SITE 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPSLDFIHGKIVRLYQGNYNNKISYKKDIFKQIEKYIYQGATYIHLVDLDGCNNPENR CCCCCCCHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHH QKSMFNIFSNFKNVSFQVGGGIRSKRDIENLFHAGVSKIVIGTSAILYPNKFKKWLKNYG HHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCHHHEEECCEEEECCHHHHHHHHHCC SKNFVLSVDININTKKENKIAIQGWKKTTEINLDDAIKQFIPYGLKNILCTDISRDGTFS CCCEEEEEEEEEECCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHHHECCCCCCCCCC GPNISLYKYLKNKFPNIVLQSSGGINSISDIYNLKKNNVEHVIVGRALLENKFTFLEASK CCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEHHHHHHCCCCEEECCH CWLKE HHCCC >Mature Secondary Structure MIIPSLDFIHGKIVRLYQGNYNNKISYKKDIFKQIEKYIYQGATYIHLVDLDGCNNPENR CCCCCCCHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHH QKSMFNIFSNFKNVSFQVGGGIRSKRDIENLFHAGVSKIVIGTSAILYPNKFKKWLKNYG HHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCHHHEEECCEEEECCHHHHHHHHHCC SKNFVLSVDININTKKENKIAIQGWKKTTEINLDDAIKQFIPYGLKNILCTDISRDGTFS CCCEEEEEEEEEECCCCCEEEEECCCCCEECCHHHHHHHHHHHHHHHHHECCCCCCCCCC GPNISLYKYLKNKFPNIVLQSSGGINSISDIYNLKKNNVEHVIVGRALLENKFTFLEASK CCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEHHHHHHCCCCEEECCH CWLKE HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA