Definition | Buchnera aphidicola str. Cc (Cinara cedri), complete genome. |
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Accession | NC_008513 |
Length | 416,380 |
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The map label for this gene is hisH [H]
Identifier: 116515009
GI number: 116515009
Start: 74556
End: 75146
Strand: Direct
Name: hisH [H]
Synonym: BCc_067
Alternate gene names: 116515009
Gene position: 74556-75146 (Clockwise)
Preceding gene: 116515008
Following gene: 116515010
Centisome position: 17.91
GC content: 20.98
Gene sequence:
>591_bases ATGTCTATTGTAATTATTAATACTGGTTGTTCTAATCTTTTTTCACTGTATAGTTCTATTAAAAGATTAGGTTATAATGT TAATGTTACTGATTCAATATGTGATATTAAAAAAGCTAAAAAAATATTTTTACCAGGTGTAGGTACAGCAGCTTATATTC TTTATATTTTAAAAAAAAAAAAAATATTTTCACTTATAAAATATACTAATCAGCCTATTTTAGGTATTTGTTTAGGTATG CAATTATTAGGTAAATATAGTTATGAGGGAGGTAAATATTCTTTATTAAATAAGCTTTCTTGTTCTATTAAAAAATTACC TTCTAAAGATTATTCAATACCACATATTGGATGGAATACAGTTTGTTATAAAAATTCACATATTTTATTTAAAAATATAG ATAACAATTCTTATTTTTATTTTTTACATAGTTATTATATGGTAGAAAATAAATATTCAATTTCTTCTTCAACACATAGT ATTAAATTTTGTTCTTCTATAGCAATAAATAATTTTTTTGGTGTACAATTTCATCCTGAAAAATCAGGAATTCCTGGAGA ACAATTAATTAAAAATTTTTTAGAGATATAA
Upstream 100 bases:
>100_bases TCATTGTGCAGAAAGTTTATTTAAAGCATTTGGACGTGCTTTAAAACAAGCTATTTTTTTAGAAGGAACTATTTTACCGA CATCAAAAGGTTTATTTTAA
Downstream 100 bases:
>100_bases ATATATGATTATTCCATCATTAGATTTTATTCATGGCAAAATTGTACGATTATATCAGGGAAATTATAATAATAAAATAT CTTATAAGAAAGATATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSIVIINTGCSNLFSLYSSIKRLGYNVNVTDSICDIKKAKKIFLPGVGTAAYILYILKKKKIFSLIKYTNQPILGICLGM QLLGKYSYEGGKYSLLNKLSCSIKKLPSKDYSIPHIGWNTVCYKNSHILFKNIDNNSYFYFLHSYYMVENKYSISSSTHS IKFCSSIAINNFFGVQFHPEKSGIPGEQLIKNFLEI
Sequences:
>Translated_196_residues MSIVIINTGCSNLFSLYSSIKRLGYNVNVTDSICDIKKAKKIFLPGVGTAAYILYILKKKKIFSLIKYTNQPILGICLGM QLLGKYSYEGGKYSLLNKLSCSIKKLPSKDYSIPHIGWNTVCYKNSHILFKNIDNNSYFYFLHSYYMVENKYSISSSTHS IKFCSSIAINNFFGVQFHPEKSGIPGEQLIKNFLEI >Mature_195_residues SIVIINTGCSNLFSLYSSIKRLGYNVNVTDSICDIKKAKKIFLPGVGTAAYILYILKKKKIFSLIKYTNQPILGICLGMQ LLGKYSYEGGKYSLLNKLSCSIKKLPSKDYSIPHIGWNTVCYKNSHILFKNIDNNSYFYFLHSYYMVENKYSISSSTHSI KFCSSIAINNFFGVQFHPEKSGIPGEQLIKNFLEI
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=196, Percent_Identity=43.3673469387755, Blast_Score=185, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6319725, Length=211, Percent_Identity=31.7535545023697, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.-
Molecular weight: Translated: 22253; Mature: 22122
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVIINTGCSNLFSLYSSIKRLGYNVNVTDSICDIKKAKKIFLPGVGTAAYILYILKKK CEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHH KIFSLIKYTNQPILGICLGMQLLGKYSYEGGKYSLLNKLSCSIKKLPSKDYSIPHIGWNT HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCE VCYKNSHILFKNIDNNSYFYFLHSYYMVENKYSISSSTHSIKFCSSIAINNFFGVQFHPE EEEECCEEEEEECCCCEEEEEEEEEEEEECCEECCCCCCHHHHHHHHHHCCEECEEEECC KSGIPGEQLIKNFLEI CCCCCHHHHHHHHHCC >Mature Secondary Structure SIVIINTGCSNLFSLYSSIKRLGYNVNVTDSICDIKKAKKIFLPGVGTAAYILYILKKK EEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHH KIFSLIKYTNQPILGICLGMQLLGKYSYEGGKYSLLNKLSCSIKKLPSKDYSIPHIGWNT HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCE VCYKNSHILFKNIDNNSYFYFLHSYYMVENKYSISSSTHSIKFCSSIAINNFFGVQFHPE EEEECCEEEEEECCCCEEEEEEEEEEEEECCEECCCCCCHHHHHHHHHHCCEECEEEECC KSGIPGEQLIKNFLEI CCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]