Click here to switch to the map view.

The map label for this gene is yagS [H]

Identifier: 114799713

GI number: 114799713

Start: 1079590

End: 1080540

Strand: Reverse

Name: yagS [H]

Synonym: HNE_1072

Alternate gene names: 114799713

Gene position: 1080540-1079590 (Counterclockwise)

Preceding gene: 114797803

Following gene: 114797284

Centisome position: 29.16

GC content: 66.56

Gene sequence:

>951_bases
ATGCAATCTTTCAGCTATCTGCTCGCCAGAACACCCCAGGAAGCCGCCGCCCTGGCCGCCGCCACCCCCGGCGCCAAATT
CATCGCCGGTGGCACCAACCTGCTGGACCTGATGAAGCTCGAGATCGAAACGCCCTCCGTGCTGATCGACATCAACGGGC
TGGACCTCGACACCATCACCTCCACGCCGGAAGGCGGCCTGCGCATCGGCGCCCTTGTCCTGAACACGGATCTGGCCGCC
AACCCGACCGTACGCTCAGACTATGCCGTCCTCTCCCGCGCGCTGCTGGCGGGCGCCTCCGGGCAGCTCCGCAATATGGC
CACCACGGCCGGCAATCTGCTTCAACGCACCCGCTGCCCCTATTTCTACGACACCAACATGGCCTGCAACAAACGCAGCG
CCGGTTCGGGGTGCAGCGCGCAGGACGGCGTCAGCCGCCAGCTCGCCGTTGTCGGCGCCAGCCCGGCCTGCATCGCCACC
CATCCCAGCGACATGGCTGTTGCGATGCAGCTCCTCGACGCTGAAATCCACACCGTCCTGCAGGATGGCTCCGAGCGGGT
CATCCCTATCGAAGACTTCTACACCGACCCGGCCGCCAATCCCGGTATCGAAACCGTCCTCCAGCCCGGCGAGCTGATCA
CAGCAGTTCACCTGCCCGCGCCCCTCGGCGGGCGGCATTATTATCAGAAGGTCAGAGACCGGGCGTCCTATGCCTTCGCC
CTCGTCTCTGTTGCGTTGGTTCTTGATGGCAAGGGCGGCGGGCGCGTGGCGCTCGGCGGCGTCGCCCACAAACCCTGGCG
CAGCCGGGAGGCCGACGCCCTTCTGCCCAGCGGCGCCGGGGCGGTCATGTCCCGCCTGCTCGCAGGCGCCCAGCCCACCC
ATGAGAATGAATTCAAGATCCTGCTCGCCGAGCGCACGCTCGCAGGGCTCCTTTCAGCCAGTGCGGAGTAA

Upstream 100 bases:

>100_bases
GCCCAGAGGAAATCCGGGAACGGATGAGTGGCAATATCTGCCGCTGCGGCGCCTATTCCAACATCCTGTCAGCCATTCAA
AGCGTTTCGGGAGCCGTCTG

Downstream 100 bases:

>100_bases
GCCATGAAGTTCGACAAACCCGTAGAAGGCGATTTCAAGGACGCCCTGACAATCGTCGGCAAGGCCATCCCCCGCATCGA
CGGCCCGGCCAAGACAACCG

Product: putative xanthine dehydrogenase, FAD-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MQSFSYLLARTPQEAAALAAATPGAKFIAGGTNLLDLMKLEIETPSVLIDINGLDLDTITSTPEGGLRIGALVLNTDLAA
NPTVRSDYAVLSRALLAGASGQLRNMATTAGNLLQRTRCPYFYDTNMACNKRSAGSGCSAQDGVSRQLAVVGASPACIAT
HPSDMAVAMQLLDAEIHTVLQDGSERVIPIEDFYTDPAANPGIETVLQPGELITAVHLPAPLGGRHYYQKVRDRASYAFA
LVSVALVLDGKGGGRVALGGVAHKPWRSREADALLPSGAGAVMSRLLAGAQPTHENEFKILLAERTLAGLLSASAE

Sequences:

>Translated_316_residues
MQSFSYLLARTPQEAAALAAATPGAKFIAGGTNLLDLMKLEIETPSVLIDINGLDLDTITSTPEGGLRIGALVLNTDLAA
NPTVRSDYAVLSRALLAGASGQLRNMATTAGNLLQRTRCPYFYDTNMACNKRSAGSGCSAQDGVSRQLAVVGASPACIAT
HPSDMAVAMQLLDAEIHTVLQDGSERVIPIEDFYTDPAANPGIETVLQPGELITAVHLPAPLGGRHYYQKVRDRASYAFA
LVSVALVLDGKGGGRVALGGVAHKPWRSREADALLPSGAGAVMSRLLAGAQPTHENEFKILLAERTLAGLLSASAE
>Mature_316_residues
MQSFSYLLARTPQEAAALAAATPGAKFIAGGTNLLDLMKLEIETPSVLIDINGLDLDTITSTPEGGLRIGALVLNTDLAA
NPTVRSDYAVLSRALLAGASGQLRNMATTAGNLLQRTRCPYFYDTNMACNKRSAGSGCSAQDGVSRQLAVVGASPACIAT
HPSDMAVAMQLLDAEIHTVLQDGSERVIPIEDFYTDPAANPGIETVLQPGELITAVHLPAPLGGRHYYQKVRDRASYAFA
LVSVALVLDGKGGGRVALGGVAHKPWRSREADALLPSGAGAVMSRLLAGAQPTHENEFKILLAERTLAGLLSASAE

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=312, Percent_Identity=69.8717948717949, Blast_Score=426, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 33017; Mature: 33017

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSFSYLLARTPQEAAALAAATPGAKFIAGGTNLLDLMKLEIETPSVLIDINGLDLDTIT
CCCHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEEECCCEEEEEECCCCCCCCC
STPEGGLRIGALVLNTDLAANPTVRSDYAVLSRALLAGASGQLRNMATTAGNLLQRTRCP
CCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
YFYDTNMACNKRSAGSGCSAQDGVSRQLAVVGASPACIATHPSDMAVAMQLLDAEIHTVL
EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHH
QDGSERVIPIEDFYTDPAANPGIETVLQPGELITAVHLPAPLGGRHYYQKVRDRASYAFA
HCCCCCEEEHHHHCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
LVSVALVLDGKGGGRVALGGVAHKPWRSREADALLPSGAGAVMSRLLAGAQPTHENEFKI
HHHEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE
LLAERTLAGLLSASAE
EEEHHHHHHHHHCCCC
>Mature Secondary Structure
MQSFSYLLARTPQEAAALAAATPGAKFIAGGTNLLDLMKLEIETPSVLIDINGLDLDTIT
CCCHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEEECCCEEEEEECCCCCCCCC
STPEGGLRIGALVLNTDLAANPTVRSDYAVLSRALLAGASGQLRNMATTAGNLLQRTRCP
CCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
YFYDTNMACNKRSAGSGCSAQDGVSRQLAVVGASPACIATHPSDMAVAMQLLDAEIHTVL
EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHH
QDGSERVIPIEDFYTDPAANPGIETVLQPGELITAVHLPAPLGGRHYYQKVRDRASYAFA
HCCCCCEEEHHHHCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
LVSVALVLDGKGGGRVALGGVAHKPWRSREADALLPSGAGAVMSRLLAGAQPTHENEFKI
HHHEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE
LLAERTLAGLLSASAE
EEEHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]