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The map label for this gene is yagR [H]

Identifier: 114797284

GI number: 114797284

Start: 1077391

End: 1079586

Strand: Reverse

Name: yagR [H]

Synonym: HNE_1071

Alternate gene names: 114797284

Gene position: 1079586-1077391 (Counterclockwise)

Preceding gene: 114799713

Following gene: 114800035

Centisome position: 29.14

GC content: 64.34

Gene sequence:

>2196_bases
ATGAAGTTCGACAAACCCGTAGAAGGCGATTTCAAGGACGCCCTGACAATCGTCGGCAAGGCCATCCCCCGCATCGACGG
CCCGGCCAAGACAACCGGCACCGCGAAATACGCCTATGAACGTCACGACGTATCCGGCCCGCAACTCGTCGGCTATCCGG
TCACTTCATCGATTGCCCGTGGACGGATCGTTTCCATCGACACATCGCGCGCCACATCCGCGCCCGGCGTCGTCACCGTT
CTGACAACCCTCGAACACCTGCCGCTGCCCAAGACATCCTACCACACGGCCACCCTGTTCGGCGGCGATCAGGTCGAGCA
TTACCATCAGGCCATCGCCGTCGTCGTAGCAAAATCCTTTGAAGAAGCCCGCAGCGCCGCCAACCTCGTAAGCGTCACAT
ACGAAAAAGCTGACGGGGATTTCGATCTTCGCAAGGCGTTGGAAAAGGGTTCGGACGAAGACCGCGAAGTGGTCTCCAGC
GCCGGTGATTTCGAAACCGCCTACGCCGCCGCAGATGTAAAACTCGACGCCGTCTACACCACGCCCGGCCAAAGCCACGC
CATGATGGAGCCCCATGCCAGCATCGCCGAATGGGAGGGTGAACGGCTGACGCTGTGGACCTCCAACCAGATGATCAAAT
GGAATGTCGACGCCCTCGCCCTGGCGCTCGACATGCCGGCTGAAAACATCCGCGTGGACTCCCCCTATATCGGCGGCGGA
TTCGGCTCAAAGCTGTTCCTGCGGGCAGATGGCGTCCTCGCGGCGCTCGCCGCCCGCAAAACCGGCAAGCCCGTCAAGGT
CATGCTGCCCCGCCCGATCATCGCAAACAACACCACCCACCGGGCCGCCACCATCCAGACCATCCGGATCGGTGCCACGC
GCGCGGGCCGCATCACGGCGCTCTACCATGAAGGCCTCTCCGGAAACCTCCCAGGGGGCGACCCCGAAGACGCCACCGCC
CAAACGCCAAAGTTCTACGCCATGGATACCCATCTGGTTGTCCGGCGCCTGGCCACGGTCCACCTGCCCGAAGGCAATGC
CATGCGCGCGCCCGGCGAAACCTCCGGCCTGATGGCGCTTGAAATCGCGATGGATGAAATGGCCGAAAAACTCGGCATGG
ACCCCGTCGAATTCAGGGTACTGAACGATACGCAGACCGCCCCTCACCCGCCCAACAAACCCTTCTCCCGGCGCAACTAC
ACCCAATGCCTGCGCACCGGCGCCGAAAAGTTCGGCTGGGCAGACCGCAACCCCGCGCCCGGCAGCCGGCGCGAGGGGCA
ATGGCTGATCGGTCACGGCATGGCGGGCGCCTATCGCGGCGGCCCGATCACCGCGTCCGGCGCCCGCGCCAAACTGCTTC
AGAATGGCCGTATCCGGATCGAAACCGACATGACCGACATCGGCACCGGATCCTACACAATCATCGCACAGACCGCCGCT
GAAATGATGGGCGTGCCCATGAGCCAGGTCGAGGTCAATCTGGGCGACTCCAGCCATCCCGCCTCCGCAGGCTCTGGCGG
CCAGTGGGGCGCGTCCAGCTCCACAGCCGGCGCCCTCGCCGCCTGCCTGGCCTTGCAGCGTGCCATCGCCGAGCGGATCG
AGGAGCCCTATGAAAGCATCAGCTTCCGGGAGGGGCAGGTCCACTTTGCCAATTCCTCCCTCCCCCTGACGCGCATTGCC
CAGGCCGGCGAGTTGCAGGCCGATGGCGCCCTTGAAGTCGGCGATTTCCGGAAGAAAGTCGTCGTCTCCACCTTCGCCGC
CCACTTCGTCGAAGTCGGCGTAAACGCCGCCACCGGTGAAACCAGGGTCCGCCGGATGCTGGCCGTGTGCGATGCCGGCC
GCATCCTCAACCCCATGACCGCCCGCAGCCAGGTCATCGGCGCCATGACGATGGGCGTCGGCGCTGCCCTGATGGAAGAA
CTCGCGCCCGATACGCGCCACGGCTTCTTCGCCAACCATGATCTGGCCGGTTACGAAGTGCCCGTCCACGCCGACATCCC
CGAACAGGAAGTCATCTTCATCGATGACCTCGACCCCTATGCCAGCCCGATGCAGGCAAAAGGCGTCGGCGAGCTTGGCC
TGTGCGGGGTCAGCGCCGCGGTCGCCAACGCCGTTTATAATGCAACCGGCGTCCGGGTGCGTGACTATCCGGTAACTCTC
AGTAAGCTGCTCTCCGGGCTTCCGGCGCTGGCGTGA

Upstream 100 bases:

>100_bases
CCTGCTCGCAGGCGCCCAGCCCACCCATGAGAATGAATTCAAGATCCTGCTCGCCGAGCGCACGCTCGCAGGGCTCCTTT
CAGCCAGTGCGGAGTAAGCC

Downstream 100 bases:

>100_bases
CCGGCCAGAAAGGATCACGGGTGCAAACGCTATCTTCCCCAGCAGGTGCCGGGCGGTATCTGGAACATCCCGAGGATGTT
CTGGCCAAATGGCTCGACTG

Product: putative xanthine dehydrogenase, molybdenum-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 731; Mature: 731

Protein sequence:

>731_residues
MKFDKPVEGDFKDALTIVGKAIPRIDGPAKTTGTAKYAYERHDVSGPQLVGYPVTSSIARGRIVSIDTSRATSAPGVVTV
LTTLEHLPLPKTSYHTATLFGGDQVEHYHQAIAVVVAKSFEEARSAANLVSVTYEKADGDFDLRKALEKGSDEDREVVSS
AGDFETAYAAADVKLDAVYTTPGQSHAMMEPHASIAEWEGERLTLWTSNQMIKWNVDALALALDMPAENIRVDSPYIGGG
FGSKLFLRADGVLAALAARKTGKPVKVMLPRPIIANNTTHRAATIQTIRIGATRAGRITALYHEGLSGNLPGGDPEDATA
QTPKFYAMDTHLVVRRLATVHLPEGNAMRAPGETSGLMALEIAMDEMAEKLGMDPVEFRVLNDTQTAPHPPNKPFSRRNY
TQCLRTGAEKFGWADRNPAPGSRREGQWLIGHGMAGAYRGGPITASGARAKLLQNGRIRIETDMTDIGTGSYTIIAQTAA
EMMGVPMSQVEVNLGDSSHPASAGSGGQWGASSSTAGALAACLALQRAIAERIEEPYESISFREGQVHFANSSLPLTRIA
QAGELQADGALEVGDFRKKVVVSTFAAHFVEVGVNAATGETRVRRMLAVCDAGRILNPMTARSQVIGAMTMGVGAALMEE
LAPDTRHGFFANHDLAGYEVPVHADIPEQEVIFIDDLDPYASPMQAKGVGELGLCGVSAAVANAVYNATGVRVRDYPVTL
SKLLSGLPALA

Sequences:

>Translated_731_residues
MKFDKPVEGDFKDALTIVGKAIPRIDGPAKTTGTAKYAYERHDVSGPQLVGYPVTSSIARGRIVSIDTSRATSAPGVVTV
LTTLEHLPLPKTSYHTATLFGGDQVEHYHQAIAVVVAKSFEEARSAANLVSVTYEKADGDFDLRKALEKGSDEDREVVSS
AGDFETAYAAADVKLDAVYTTPGQSHAMMEPHASIAEWEGERLTLWTSNQMIKWNVDALALALDMPAENIRVDSPYIGGG
FGSKLFLRADGVLAALAARKTGKPVKVMLPRPIIANNTTHRAATIQTIRIGATRAGRITALYHEGLSGNLPGGDPEDATA
QTPKFYAMDTHLVVRRLATVHLPEGNAMRAPGETSGLMALEIAMDEMAEKLGMDPVEFRVLNDTQTAPHPPNKPFSRRNY
TQCLRTGAEKFGWADRNPAPGSRREGQWLIGHGMAGAYRGGPITASGARAKLLQNGRIRIETDMTDIGTGSYTIIAQTAA
EMMGVPMSQVEVNLGDSSHPASAGSGGQWGASSSTAGALAACLALQRAIAERIEEPYESISFREGQVHFANSSLPLTRIA
QAGELQADGALEVGDFRKKVVVSTFAAHFVEVGVNAATGETRVRRMLAVCDAGRILNPMTARSQVIGAMTMGVGAALMEE
LAPDTRHGFFANHDLAGYEVPVHADIPEQEVIFIDDLDPYASPMQAKGVGELGLCGVSAAVANAVYNATGVRVRDYPVTL
SKLLSGLPALA
>Mature_731_residues
MKFDKPVEGDFKDALTIVGKAIPRIDGPAKTTGTAKYAYERHDVSGPQLVGYPVTSSIARGRIVSIDTSRATSAPGVVTV
LTTLEHLPLPKTSYHTATLFGGDQVEHYHQAIAVVVAKSFEEARSAANLVSVTYEKADGDFDLRKALEKGSDEDREVVSS
AGDFETAYAAADVKLDAVYTTPGQSHAMMEPHASIAEWEGERLTLWTSNQMIKWNVDALALALDMPAENIRVDSPYIGGG
FGSKLFLRADGVLAALAARKTGKPVKVMLPRPIIANNTTHRAATIQTIRIGATRAGRITALYHEGLSGNLPGGDPEDATA
QTPKFYAMDTHLVVRRLATVHLPEGNAMRAPGETSGLMALEIAMDEMAEKLGMDPVEFRVLNDTQTAPHPPNKPFSRRNY
TQCLRTGAEKFGWADRNPAPGSRREGQWLIGHGMAGAYRGGPITASGARAKLLQNGRIRIETDMTDIGTGSYTIIAQTAA
EMMGVPMSQVEVNLGDSSHPASAGSGGQWGASSSTAGALAACLALQRAIAERIEEPYESISFREGQVHFANSSLPLTRIA
QAGELQADGALEVGDFRKKVVVSTFAAHFVEVGVNAATGETRVRRMLAVCDAGRILNPMTARSQVIGAMTMGVGAALMEE
LAPDTRHGFFANHDLAGYEVPVHADIPEQEVIFIDDLDPYASPMQAKGVGELGLCGVSAAVANAVYNATGVRVRDYPVTL
SKLLSGLPALA

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI71773480, Length=737, Percent_Identity=25.7801899592944, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI91823271, Length=716, Percent_Identity=25.4189944134078, Blast_Score=150, Evalue=6e-36,
Organism=Escherichia coli, GI1786478, Length=731, Percent_Identity=60.4651162790698, Blast_Score=858, Evalue=0.0,
Organism=Escherichia coli, GI1789230, Length=753, Percent_Identity=29.3492695883134, Blast_Score=234, Evalue=1e-62,
Organism=Escherichia coli, GI1789246, Length=813, Percent_Identity=26.5682656826568, Blast_Score=202, Evalue=7e-53,
Organism=Caenorhabditis elegans, GI17540638, Length=731, Percent_Identity=24.7606019151847, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24647199, Length=708, Percent_Identity=23.0225988700565, Blast_Score=125, Evalue=1e-28,
Organism=Drosophila melanogaster, GI17737937, Length=674, Percent_Identity=24.6290801186944, Blast_Score=121, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24647193, Length=735, Percent_Identity=24.4897959183673, Blast_Score=119, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24647201, Length=710, Percent_Identity=23.8028169014084, Blast_Score=116, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24647195, Length=736, Percent_Identity=24.320652173913, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24647197, Length=727, Percent_Identity=24.484181568088, Blast_Score=104, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 77843; Mature: 77843

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFDKPVEGDFKDALTIVGKAIPRIDGPAKTTGTAKYAYERHDVSGPQLVGYPVTSSIAR
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCHHHHHC
GRIVSIDTSRATSAPGVVTVLTTLEHLPLPKTSYHTATLFGGDQVEHYHQAIAVVVAKSF
CEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
EEARSAANLVSVTYEKADGDFDLRKALEKGSDEDREVVSSAGDFETAYAAADVKLDAVYT
HHHHHHHHEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHEEEECEEEEEEEE
TPGQSHAMMEPHASIAEWEGERLTLWTSNQMIKWNVDALALALDMPAENIRVDSPYIGGG
CCCCCCCCCCCCCHHHHCCCCEEEEEECCCEEEEECCEEEEEECCCHHHEEECCCEECCC
FGSKLFLRADGVLAALAARKTGKPVKVMLPRPIIANNTTHRAATIQTIRIGATRAGRITA
CCCEEEEEECCHHHHHHHHCCCCCEEEEECCCEEECCCCCCEEEEEEEEECCCCCCEEEE
LYHEGLSGNLPGGDPEDATAQTPKFYAMDTHLVVRRLATVHLPEGNAMRAPGETSGLMAL
EEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEE
EIAMDEMAEKLGMDPVEFRVLNDTQTAPHPPNKPFSRRNYTQCLRTGAEKFGWADRNPAP
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GSRREGQWLIGHGMAGAYRGGPITASGARAKLLQNGRIRIETDMTDIGTGSYTIIAQTAA
CCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEHHHH
EMMGVPMSQVEVNLGDSSHPASAGSGGQWGASSSTAGALAACLALQRAIAERIEEPYESI
HHHCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SFREGQVHFANSSLPLTRIAQAGELQADGALEVGDFRKKVVVSTFAAHFVEVGVNAATGE
CCCCCEEEEECCCCCHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCH
TRVRRMLAVCDAGRILNPMTARSQVIGAMTMGVGAALMEELAPDTRHGFFANHDLAGYEV
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEE
PVHADIPEQEVIFIDDLDPYASPMQAKGVGELGLCGVSAAVANAVYNATGVRVRDYPVTL
EEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHH
SKLLSGLPALA
HHHHCCCCCCC
>Mature Secondary Structure
MKFDKPVEGDFKDALTIVGKAIPRIDGPAKTTGTAKYAYERHDVSGPQLVGYPVTSSIAR
CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCHHHHHC
GRIVSIDTSRATSAPGVVTVLTTLEHLPLPKTSYHTATLFGGDQVEHYHQAIAVVVAKSF
CEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
EEARSAANLVSVTYEKADGDFDLRKALEKGSDEDREVVSSAGDFETAYAAADVKLDAVYT
HHHHHHHHEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHEEEECEEEEEEEE
TPGQSHAMMEPHASIAEWEGERLTLWTSNQMIKWNVDALALALDMPAENIRVDSPYIGGG
CCCCCCCCCCCCCHHHHCCCCEEEEEECCCEEEEECCEEEEEECCCHHHEEECCCEECCC
FGSKLFLRADGVLAALAARKTGKPVKVMLPRPIIANNTTHRAATIQTIRIGATRAGRITA
CCCEEEEEECCHHHHHHHHCCCCCEEEEECCCEEECCCCCCEEEEEEEEECCCCCCEEEE
LYHEGLSGNLPGGDPEDATAQTPKFYAMDTHLVVRRLATVHLPEGNAMRAPGETSGLMAL
EEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEE
EIAMDEMAEKLGMDPVEFRVLNDTQTAPHPPNKPFSRRNYTQCLRTGAEKFGWADRNPAP
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GSRREGQWLIGHGMAGAYRGGPITASGARAKLLQNGRIRIETDMTDIGTGSYTIIAQTAA
CCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCEEEEEHHHH
EMMGVPMSQVEVNLGDSSHPASAGSGGQWGASSSTAGALAACLALQRAIAERIEEPYESI
HHHCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SFREGQVHFANSSLPLTRIAQAGELQADGALEVGDFRKKVVVSTFAAHFVEVGVNAATGE
CCCCCEEEEECCCCCHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCH
TRVRRMLAVCDAGRILNPMTARSQVIGAMTMGVGAALMEELAPDTRHGFFANHDLAGYEV
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEE
PVHADIPEQEVIFIDDLDPYASPMQAKGVGELGLCGVSAAVANAVYNATGVRVRDYPVTL
EEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHH
SKLLSGLPALA
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]