| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798529
Identifier: 114798529
GI number: 114798529
Start: 172494
End: 173138
Strand: Direct
Name: 114798529
Synonym: HNE_0185
Alternate gene names: NA
Gene position: 172494-173138 (Clockwise)
Preceding gene: 114798689
Following gene: 114797981
Centisome position: 4.66
GC content: 60.16
Gene sequence:
>645_bases ATGAGTTCATCCGCCCGCTTTCTGACCCCGCTGCTCACCGGAGCTGCAATTTCTGTTCTTGCCGCCTGCGGTCCGGGAGC GCCGCCGCCCGCCGAGACTGCGGCGGTCGAGACCGGAGAAGCACTGCCGGAAGACGGACCTTCTGGTGACGTTCAAACCC CGTCCGGTGATGACCATCCGGAAGGTGAGGCGGGCCACCACGAGGATGGAGAAGGCCATGATCATGAAGAAGAGCATGCT GGGGGCACAGCTCATGTTCACGGCATTGCGGATCTGGCCTTTGTCTTCGAAGGTGGGACGCTGACCGCCGACATGATGTC TCCGCTGGCCAATTTCGGGCTCTCAGAGGCCGACGGGGTGTTCACGGATGAAATCAAATCGGCGCTTCCGGGACTGATTA CCGTGACGGGTGGCGATTGCACGCCAAACGCGCCGGTGGCGGAGATCGATACATCAAGCGGCCACACAGACGCGCATGTC GGGTTTTCCTGGACCTGCATCAATCCGGCCAATGTGTCCTCGGCCCGCTTTACCGGGTTTGCCGACTTTCCGGGTTTTGA AACGATCAATGCCGTCTTTGTTGGCGATACGGTTCAGAAAGCCGCAGAGCTGACGCCTTCCTCCCCAGAGCTTTCCCTGA AATAA
Upstream 100 bases:
>100_bases GTTATAATGTTTCACTCTTGCGCTTGCCAGAAGTATTTTGCGGCACAGCTGGGTTTTCCCGGCATTCGTATGCCGCTTTC CCGTTACCAGGAGCTGACCC
Downstream 100 bases:
>100_bases CGGCTGAGATGGCTGACCCGGTTATTGATATCGAAGGGCTGCGCTTTGCCTGGAAGAGCGGCCCGCAGGTGCTCGACATG GATACGTTTCGTGTCGATGC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSSSARFLTPLLTGAAISVLAACGPGAPPPAETAAVETGEALPEDGPSGDVQTPSGDDHPEGEAGHHEDGEGHDHEEEHA GGTAHVHGIADLAFVFEGGTLTADMMSPLANFGLSEADGVFTDEIKSALPGLITVTGGDCTPNAPVAEIDTSSGHTDAHV GFSWTCINPANVSSARFTGFADFPGFETINAVFVGDTVQKAAELTPSSPELSLK
Sequences:
>Translated_214_residues MSSSARFLTPLLTGAAISVLAACGPGAPPPAETAAVETGEALPEDGPSGDVQTPSGDDHPEGEAGHHEDGEGHDHEEEHA GGTAHVHGIADLAFVFEGGTLTADMMSPLANFGLSEADGVFTDEIKSALPGLITVTGGDCTPNAPVAEIDTSSGHTDAHV GFSWTCINPANVSSARFTGFADFPGFETINAVFVGDTVQKAAELTPSSPELSLK >Mature_213_residues SSSARFLTPLLTGAAISVLAACGPGAPPPAETAAVETGEALPEDGPSGDVQTPSGDDHPEGEAGHHEDGEGHDHEEEHAG GTAHVHGIADLAFVFEGGTLTADMMSPLANFGLSEADGVFTDEIKSALPGLITVTGGDCTPNAPVAEIDTSSGHTDAHVG FSWTCINPANVSSARFTGFADFPGFETINAVFVGDTVQKAAELTPSSPELSLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21663; Mature: 21531
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSARFLTPLLTGAAISVLAACGPGAPPPAETAAVETGEALPEDGPSGDVQTPSGDDHP CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC EGEAGHHEDGEGHDHEEEHAGGTAHVHGIADLAFVFEGGTLTADMMSPLANFGLSEADGV CCCCCCCCCCCCCCCCHHHCCCEEEEHHHHEEEEEECCCCEEHHHHHHHHHCCCCCCCCC FTDEIKSALPGLITVTGGDCTPNAPVAEIDTSSGHTDAHVGFSWTCINPANVSSARFTGF HHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEECCC ADFPGFETINAVFVGDTVQKAAELTPSSPELSLK CCCCCCCEEEEEEECHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SSSARFLTPLLTGAAISVLAACGPGAPPPAETAAVETGEALPEDGPSGDVQTPSGDDHP CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC EGEAGHHEDGEGHDHEEEHAGGTAHVHGIADLAFVFEGGTLTADMMSPLANFGLSEADGV CCCCCCCCCCCCCCCCHHHCCCEEEEHHHHEEEEEECCCCEEHHHHHHHHHCCCCCCCCC FTDEIKSALPGLITVTGGDCTPNAPVAEIDTSSGHTDAHVGFSWTCINPANVSSARFTGF HHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCEECCC ADFPGFETINAVFVGDTVQKAAELTPSSPELSLK CCCCCCCEEEEEEECHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA