| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is linC [H]
Identifier: 114798104
GI number: 114798104
Start: 952974
End: 954296
Strand: Reverse
Name: linC [H]
Synonym: HNE_0938
Alternate gene names: 114798104
Gene position: 954296-952974 (Counterclockwise)
Preceding gene: 114798162
Following gene: 114797130
Centisome position: 25.76
GC content: 57.29
Gene sequence:
>1323_bases ATGAATGTCACTGAAACCTATCAGGTCGAGAGCCCTCCCAAGGAGCCAAAATTCGGCAAGGCTTACGCCCTGACACCCCC ACTGGATCTTACCCAGCCCACCGTTTTCTCCGAACATGGCGGCTATACGTACGCCGATTTCGCGAAGATGCGGGAGAAGG CGCCCGTGATGTGGCACCCGGAAGAATATGGCGCGGGCTTCTGGGCCGTTACCTCATATGATCTCGTCAAAAAGGTCGAA CTGACACCGGAAACGTTCTCGTCGCAAAAAGGCGGCATCCTGATGAATTACGGCATGGAGGGCGTTCCACGCCATCCGCT GCTGCATTCTTCGTCGCTGAACTCGCTGATCAACCTCGACCGGCCCTATCACACGCCCCTGCGCATGGAGCATATGGCTT ATTTCCGCGCCGATTTTGTTGCGGAACTGAGAAAGCGGGTGGATGTGGAAGTAAACCGCCTGCTCGACACGATGGAGGCC CAAGGCCCCGTTGTAGACATGGTGGAAATGTTCTCGGCGGAACTACCCCTCTTTACATTGTGTGAAATCCTGGGTGTTCC ACCGGCTGACCGCCCGAAGCTGGTCCATTGGATGCACTTCCTCGAGACTTCGCAATACCAGGCCCAGCAGGAAGGCCTCG GGAATGTATCCCAAGAGCAGATCATGGCATTCCTGAACGAGATTCAGGCCATGTTTGAATATGGCCGCTACCTGCTAGAG GAGCGCCGCAAAAATCCGCAGCCGGATCTTCTCTCGGCCATTGCCAATGTGCAGGTTGATGGCAAGCCGCTGTCGCCGGA ATTCCTTGATGGCTCTTGGCTGCTCATTGTCTTCGCGGGCAACGATACGACGCGTAACTCGCTCTCAGGGACGATGCGCC TGCTGACGGAAAATCCCGAGCTGCGCGAACAGTTGAAAGAAAAGCCCGAGCGCTTTCCTAACTTCGTGCACGAAGCCATC CGCATGGTGACGCCGGTGACCTATATGCGCCGCACGGCCACTCAGGACACAGAGCTGGGCGACCAGAAGATTGCCGAAGG CGAAAAGGTGATCATGTATTACGCGGCCGCCAACCGCGATCCGTCGAAATTCGAGAACCCGGACCGTTTCGATATCGACC GCTCCAACGCCAAGGAACATCTCGCCTTTGGTCACGGGCCGCATGTGTGCCTCGGCCAGCGGGTCGCCAACATGCAGCTG GAGTCTGCTTACCGGCAAATCCTGTCGCGTTTCCCGAATGTGCGCTGGACCGGCGAGCAGACGATTGCGCCCAACAACTT CGTTCACGCGATCTCGTCCCTGATGGTGGATCTGGGCAAATGA
Upstream 100 bases:
>100_bases CCCGGTACGGTACAGGTTCTGATACTTGGGGGCGCTTCCGGGCGCCCCACCCTGCCCCTGCCCTCCCGAACAGATATTGT GAGCTACGCCCATGACCTTC
Downstream 100 bases:
>100_bases GCGTTGTTCTGCGCGAAGACCGGGACGGCCTGGCCATCCTGACGCTCAACCGGCCGGACAAGCTGAACTCGCTGACCGTC GGCATGTTCGAAGAACTGCG
Product: cytochrome P450 family protein
Products: NA
Alternate protein names: Cytochrome P450 111; Cytochrome P450lin [H]
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MNVTETYQVESPPKEPKFGKAYALTPPLDLTQPTVFSEHGGYTYADFAKMREKAPVMWHPEEYGAGFWAVTSYDLVKKVE LTPETFSSQKGGILMNYGMEGVPRHPLLHSSSLNSLINLDRPYHTPLRMEHMAYFRADFVAELRKRVDVEVNRLLDTMEA QGPVVDMVEMFSAELPLFTLCEILGVPPADRPKLVHWMHFLETSQYQAQQEGLGNVSQEQIMAFLNEIQAMFEYGRYLLE ERRKNPQPDLLSAIANVQVDGKPLSPEFLDGSWLLIVFAGNDTTRNSLSGTMRLLTENPELREQLKEKPERFPNFVHEAI RMVTPVTYMRRTATQDTELGDQKIAEGEKVIMYYAAANRDPSKFENPDRFDIDRSNAKEHLAFGHGPHVCLGQRVANMQL ESAYRQILSRFPNVRWTGEQTIAPNNFVHAISSLMVDLGK
Sequences:
>Translated_440_residues MNVTETYQVESPPKEPKFGKAYALTPPLDLTQPTVFSEHGGYTYADFAKMREKAPVMWHPEEYGAGFWAVTSYDLVKKVE LTPETFSSQKGGILMNYGMEGVPRHPLLHSSSLNSLINLDRPYHTPLRMEHMAYFRADFVAELRKRVDVEVNRLLDTMEA QGPVVDMVEMFSAELPLFTLCEILGVPPADRPKLVHWMHFLETSQYQAQQEGLGNVSQEQIMAFLNEIQAMFEYGRYLLE ERRKNPQPDLLSAIANVQVDGKPLSPEFLDGSWLLIVFAGNDTTRNSLSGTMRLLTENPELREQLKEKPERFPNFVHEAI RMVTPVTYMRRTATQDTELGDQKIAEGEKVIMYYAAANRDPSKFENPDRFDIDRSNAKEHLAFGHGPHVCLGQRVANMQL ESAYRQILSRFPNVRWTGEQTIAPNNFVHAISSLMVDLGK >Mature_440_residues MNVTETYQVESPPKEPKFGKAYALTPPLDLTQPTVFSEHGGYTYADFAKMREKAPVMWHPEEYGAGFWAVTSYDLVKKVE LTPETFSSQKGGILMNYGMEGVPRHPLLHSSSLNSLINLDRPYHTPLRMEHMAYFRADFVAELRKRVDVEVNRLLDTMEA QGPVVDMVEMFSAELPLFTLCEILGVPPADRPKLVHWMHFLETSQYQAQQEGLGNVSQEQIMAFLNEIQAMFEYGRYLLE ERRKNPQPDLLSAIANVQVDGKPLSPEFLDGSWLLIVFAGNDTTRNSLSGTMRLLTENPELREQLKEKPERFPNFVHEAI RMVTPVTYMRRTATQDTELGDQKIAEGEKVIMYYAAANRDPSKFENPDRFDIDRSNAKEHLAFGHGPHVCLGQRVANMQL ESAYRQILSRFPNVRWTGEQTIAPNNFVHAISSLMVDLGK
Specific function: Catalyzes the 8-methyl hydroxylation of linalool [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI261278370, Length=178, Percent_Identity=26.9662921348315, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI195972896, Length=178, Percent_Identity=26.9662921348315, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI195972898, Length=178, Percent_Identity=26.9662921348315, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI261278372, Length=178, Percent_Identity=26.9662921348315, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI4503231, Length=175, Percent_Identity=27.4285714285714, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI4503211, Length=230, Percent_Identity=23.4782608695652, Blast_Score=65, Evalue=1e-10, Organism=Drosophila melanogaster, GI17933518, Length=189, Percent_Identity=25.3968253968254, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24642101, Length=154, Percent_Identity=25.974025974026, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI21355669, Length=202, Percent_Identity=26.2376237623762, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI19920736, Length=222, Percent_Identity=25.6756756756757, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24646122, Length=201, Percent_Identity=27.363184079602, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: =1.14.99.28 [H]
Molecular weight: Translated: 50176; Mature: 50176
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVTETYQVESPPKEPKFGKAYALTPPLDLTQPTVFSEHGGYTYADFAKMREKAPVMWHP CCCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCEECCCCCEEHHHHHHHHHCCCCEECC EEYGAGFWAVTSYDLVKKVELTPETFSSQKGGILMNYGMEGVPRHPLLHSSSLNSLINLD HHHCCCEEEEEHHHHHHHEECCCHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCC RPYHTPLRMEHMAYFRADFVAELRKRVDVEVNRLLDTMEAQGPVVDMVEMFSAELPLFTL CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHH CEILGVPPADRPKLVHWMHFLETSQYQAQQEGLGNVSQEQIMAFLNEIQAMFEYGRYLLE HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ERRKNPQPDLLSAIANVQVDGKPLSPEFLDGSWLLIVFAGNDTTRNSLSGTMRLLTENPE HHHCCCCHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHH LREQLKEKPERFPNFVHEAIRMVTPVTYMRRTATQDTELGDQKIAEGEKVIMYYAAANRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEEEECCCC PSKFENPDRFDIDRSNAKEHLAFGHGPHVCLGQRVANMQLESAYRQILSRFPNVRWTGEQ CHHCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC TIAPNNFVHAISSLMVDLGK CCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MNVTETYQVESPPKEPKFGKAYALTPPLDLTQPTVFSEHGGYTYADFAKMREKAPVMWHP CCCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCEECCCCCEEHHHHHHHHHCCCCEECC EEYGAGFWAVTSYDLVKKVELTPETFSSQKGGILMNYGMEGVPRHPLLHSSSLNSLINLD HHHCCCEEEEEHHHHHHHEECCCHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCC RPYHTPLRMEHMAYFRADFVAELRKRVDVEVNRLLDTMEAQGPVVDMVEMFSAELPLFTL CCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHH CEILGVPPADRPKLVHWMHFLETSQYQAQQEGLGNVSQEQIMAFLNEIQAMFEYGRYLLE HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ERRKNPQPDLLSAIANVQVDGKPLSPEFLDGSWLLIVFAGNDTTRNSLSGTMRLLTENPE HHHCCCCHHHHHHHHCCEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHH LREQLKEKPERFPNFVHEAIRMVTPVTYMRRTATQDTELGDQKIAEGEKVIMYYAAANRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEEEECCCC PSKFENPDRFDIDRSNAKEHLAFGHGPHVCLGQRVANMQLESAYRQILSRFPNVRWTGEQ CHHCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC TIAPNNFVHAISSLMVDLGK CCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8376348; 2295633; 3813557; 2578028; 1610873; 12237225 [H]