| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is cyp108 [H]
Identifier: 114798162
GI number: 114798162
Start: 954375
End: 955712
Strand: Reverse
Name: cyp108 [H]
Synonym: HNE_0939
Alternate gene names: 114798162
Gene position: 955712-954375 (Counterclockwise)
Preceding gene: 114798538
Following gene: 114798104
Centisome position: 25.8
GC content: 59.87
Gene sequence:
>1338_bases ATGTCCGATTCAGCTGTGCTGGCGGTTCCGCCGGACACAAAGAAAGACCCTGCCCGCCGTATGAGCGAGGCCGCCGCCGC AACCTGCGACCAGATCGTAACTCCGGCCGTCTATGCCGACCCGCCCACGCTGGACGCCGCCTTCAAGCGCCTCCGCGCCG AAGACCCGCTCGCCTGGTGTGAGCCGGAGGGTTTCCGTCCCTTCTGGGCCGTCACCAAGCATGCCGACATCATGGACGTG TCGCGCCAGAACCAGCTGTTCACGAACGGCCAGCGCGAGATGCTGTCCTATCATGAGGCGGAGAAAGGCGTTTACGCCAA GTTTGGCCAGCCCCACCTGCTCAAGACCCTCGTTCAGCTCGACGACCCGTCCCACTACAAGCTGCGCCACCTGACCCAGG AATGGTTCATGCCGCAGAACGTGAAAAAGCGGGATGACGCCGTCCGCAGCATTGCCAAGCAATATGTCGACCGGATGGAA GACCTTGGCGGCGAATGCGACTTCCAGCGTGATATCGCGCTCTATTATCCTCTGCGCGTGATCATGCAGATCCTGGGTGT TCCGGAATCGGACGAGCCGATGATGCTGAAGCTGACGCAGGAAATCTTCGGCGCGCAGGATGAAGACCTGATGCGCGACA AATCCCTGGCTGAGGAGCGCGATGTCGAAAAAGGCCTCGCCTCGATCCAGGCGACGCTGGCCGAATTCTTCATGTACTTC ACCAACATCACAGCCGACCGCCGCGCCAACCCGAAGGATGACGTGTCCACCGTGATTGCCAATGGCATGATTGACGGTGA GCCTATCGGTCAGCTCGAAGCGATGAGCTATTACATCATCACGGCAGCCGCCGGACACGACACAACCAGCGCCTCAACCG GCGGTGGCGTGCTGGCGATGCTGCAGAGCCCGTCTGAACTCAAGAAAATGATGGATGATCCAAAGGGCATGTCACGCACC GCCGTGGACGAAGCCATCCGCTGGACCACGCCGGTGAAGCATTTCATGCGCACGGCGCAGGATGACTACACCCTCCGTGG CAAGAACATCCTGAAAGGCGAAAGCCTGCTGCTCTGCTATCCGTCTGGCAACCGCGATGAGGAAGTCTTTGACGACCCTT ACAGCTTCAAGGCCGACCGGTCGCCCAACAAGCTGATCTCGTTTGGCTATGGCGGGCATATGTGCCTGGGCATGCACCTG GCACGCCTTGAAATGCAGGCGATCTATGAAGAACTCTTCAGCCGCGTGAAGTCGATTGAACTCGCCGGCGAGCCAAGCTT CATCAAGGCCAATTTCGTGGGCGGCCCGAAATCCATCCCGGTACGGTACAGGTTCTGA
Upstream 100 bases:
>100_bases GCCTGCCGCTAAGTCACGCCTTGGCAGACGGGGGCCTTCGGCTAGAGTGAAGGGGAAGCGGTCGTAGACGCCGCAAACCC CTACTCTGGAGGAATTTCCC
Downstream 100 bases:
>100_bases TACTTGGGGGCGCTTCCGGGCGCCCCACCCTGCCCCTGCCCTCCCGAACAGATATTGTGAGCTACGCCCATGACCTTCAT GAATGTCACTGAAACCTATC
Product: cytochrome P450 family protein
Products: NA
Alternate protein names: Cytochrome P450terp; Cytochrome P450 108 [H]
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MSDSAVLAVPPDTKKDPARRMSEAAAATCDQIVTPAVYADPPTLDAAFKRLRAEDPLAWCEPEGFRPFWAVTKHADIMDV SRQNQLFTNGQREMLSYHEAEKGVYAKFGQPHLLKTLVQLDDPSHYKLRHLTQEWFMPQNVKKRDDAVRSIAKQYVDRME DLGGECDFQRDIALYYPLRVIMQILGVPESDEPMMLKLTQEIFGAQDEDLMRDKSLAEERDVEKGLASIQATLAEFFMYF TNITADRRANPKDDVSTVIANGMIDGEPIGQLEAMSYYIITAAAGHDTTSASTGGGVLAMLQSPSELKKMMDDPKGMSRT AVDEAIRWTTPVKHFMRTAQDDYTLRGKNILKGESLLLCYPSGNRDEEVFDDPYSFKADRSPNKLISFGYGGHMCLGMHL ARLEMQAIYEELFSRVKSIELAGEPSFIKANFVGGPKSIPVRYRF
Sequences:
>Translated_445_residues MSDSAVLAVPPDTKKDPARRMSEAAAATCDQIVTPAVYADPPTLDAAFKRLRAEDPLAWCEPEGFRPFWAVTKHADIMDV SRQNQLFTNGQREMLSYHEAEKGVYAKFGQPHLLKTLVQLDDPSHYKLRHLTQEWFMPQNVKKRDDAVRSIAKQYVDRME DLGGECDFQRDIALYYPLRVIMQILGVPESDEPMMLKLTQEIFGAQDEDLMRDKSLAEERDVEKGLASIQATLAEFFMYF TNITADRRANPKDDVSTVIANGMIDGEPIGQLEAMSYYIITAAAGHDTTSASTGGGVLAMLQSPSELKKMMDDPKGMSRT AVDEAIRWTTPVKHFMRTAQDDYTLRGKNILKGESLLLCYPSGNRDEEVFDDPYSFKADRSPNKLISFGYGGHMCLGMHL ARLEMQAIYEELFSRVKSIELAGEPSFIKANFVGGPKSIPVRYRF >Mature_444_residues SDSAVLAVPPDTKKDPARRMSEAAAATCDQIVTPAVYADPPTLDAAFKRLRAEDPLAWCEPEGFRPFWAVTKHADIMDVS RQNQLFTNGQREMLSYHEAEKGVYAKFGQPHLLKTLVQLDDPSHYKLRHLTQEWFMPQNVKKRDDAVRSIAKQYVDRMED LGGECDFQRDIALYYPLRVIMQILGVPESDEPMMLKLTQEIFGAQDEDLMRDKSLAEERDVEKGLASIQATLAEFFMYFT NITADRRANPKDDVSTVIANGMIDGEPIGQLEAMSYYIITAAAGHDTTSASTGGGVLAMLQSPSELKKMMDDPKGMSRTA VDEAIRWTTPVKHFMRTAQDDYTLRGKNILKGESLLLCYPSGNRDEEVFDDPYSFKADRSPNKLISFGYGGHMCLGMHLA RLEMQAIYEELFSRVKSIELAGEPSFIKANFVGGPKSIPVRYRF
Specific function: Catalyzes the hydroxylation of alpha-terpineol [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 50072; Mature: 49940
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSAVLAVPPDTKKDPARRMSEAAAATCDQIVTPAVYADPPTLDAAFKRLRAEDPLAWC CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC EPEGFRPFWAVTKHADIMDVSRQNQLFTNGQREMLSYHEAEKGVYAKFGQPHLLKTLVQL CCCCCCCHHHHHCCCHHHHHHHCCHHHHCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHC DDPSHYKLRHLTQEWFMPQNVKKRDDAVRSIAKQYVDRMEDLGGECDFQRDIALYYPLRV CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH IMQILGVPESDEPMMLKLTQEIFGAQDEDLMRDKSLAEERDVEKGLASIQATLAEFFMYF HHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TNITADRRANPKDDVSTVIANGMIDGEPIGQLEAMSYYIITAAAGHDTTSASTGGGVLAM HCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCEEEE LQSPSELKKMMDDPKGMSRTAVDEAIRWTTPVKHFMRTAQDDYTLRGKNILKGESLLLCY ECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCEEEEEC PSGNRDEEVFDDPYSFKADRSPNKLISFGYGGHMCLGMHLARLEMQAIYEELFSRVKSIE CCCCCCCHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEE LAGEPSFIKANFVGGPKSIPVRYRF ECCCCCEEEEEECCCCCCCCEEECC >Mature Secondary Structure SDSAVLAVPPDTKKDPARRMSEAAAATCDQIVTPAVYADPPTLDAAFKRLRAEDPLAWC CCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC EPEGFRPFWAVTKHADIMDVSRQNQLFTNGQREMLSYHEAEKGVYAKFGQPHLLKTLVQL CCCCCCCHHHHHCCCHHHHHHHCCHHHHCCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHC DDPSHYKLRHLTQEWFMPQNVKKRDDAVRSIAKQYVDRMEDLGGECDFQRDIALYYPLRV CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH IMQILGVPESDEPMMLKLTQEIFGAQDEDLMRDKSLAEERDVEKGLASIQATLAEFFMYF HHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TNITADRRANPKDDVSTVIANGMIDGEPIGQLEAMSYYIITAAAGHDTTSASTGGGVLAM HCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCEEEE LQSPSELKKMMDDPKGMSRTAVDEAIRWTTPVKHFMRTAQDDYTLRGKNILKGESLLLCY ECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCEEEEEC PSGNRDEEVFDDPYSFKADRSPNKLISFGYGGHMCLGMHLARLEMQAIYEELFSRVKSIE CCCCCCCHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEE LAGEPSFIKANFVGGPKSIPVRYRF ECCCCCEEEEEECCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1629218; 8120894 [H]