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The map label for this gene is 114798049

Identifier: 114798049

GI number: 114798049

Start: 3179016

End: 3180035

Strand: Reverse

Name: 114798049

Synonym: HNE_3010

Alternate gene names: NA

Gene position: 3180035-3179016 (Counterclockwise)

Preceding gene: 114800387

Following gene: 114798130

Centisome position: 85.83

GC content: 60.1

Gene sequence:

>1020_bases
ATGATCCCCTATATCGTGGCTGCGCTGGCGTTTCTCGCGATTGCCGGGCTTGGTCTCGTCCTGACCGGCGGCAATGATGA
TGCGGCACGCAAGCGCGCCAGAGCCATCAGCGCGGGCCGGGGAGGGGCGCCTGTAAAGGGCGGCAAGGTCGTCGATGAAA
ACATTCGCCGCCGCGCCAAGACCCAGGAAATGCTCGAAGGTCTGCGCCGTCAGGACAAGGAACGCCGCCGCAACGATCCC
ATGCGGAATATCGGCTCCAAGCTCACTCAGGCGGGCCTGGAAATTCCGGTCCCCATGTTCTGGCTGCTTTCGGCTGTTTG
CGGGCTCATCTGCGCAGGTATCGTCTATATCTCCGGCGCAGACGGTCTCGTCATCAACGGTATCTCCCTGAAAAGCCGGC
CAGTGCTCATCGCAGCGGCCTTCTTTGGCGGCACTCTGGGCATTCCCCAGTTCATACTCAACTTCCTGATCAAGGGCCGC
CACACCAAGATGATCAACCAGTTTGCCGACGCGCTGGACATCATCGTGCGCGGTGTGCGGTCCGGCCTGCCGCTCAACGA
ATGTATCCGCGTCATTGCCAAGGAAAGCCCCGAGCCGCTGCGCAAGGAGTTCCTGACATTCGCCGACAATCTCGCGATGG
GCGCCGGGCTGGAACGATCACTGGCCGCGCTCTACAAGCGCCTTCCGCTCCAGGAGATCAACTTCTTCGCCATCGTGCTG
ATCATTCAGTCAAAAGCGGGCGGCAACCTCTCCGAAGCGCTGCACAACCTCTCGACAGTGATCCGTTCCCGGAAGATGAT
GCGGGAAAAGGTCAAGGCGCTTTCCTCGGAAGCCAAGGCGTCGGCCATGATCATCGGCAGCCTTCCGATTGCCGTGGGCG
TGATGGTCTTCCTGACCACGCCCGACTACATCATGACACTGTTCACGACCGAGACGGGTCACGTCATCCTCGTCGTCGCA
GTAGGTATGATGGGCTCGGGCATCACGGTCATGCGCAATATGATGAACTTTGATATGTGA

Upstream 100 bases:

>100_bases
TCGGCCGGCCACGCTTCTGGGAGCGCGCGTCCTATTACAATCTTGAGCGCGAACTTGCTGCGGCGCTTGATGAACTGAAC
GGTGCCTGATGTCTGGTGCG

Downstream 100 bases:

>100_bases
GGCGCAGGCAACAGATGTATGACTTCCTCGTCTCCTTCACCAAGCCCCAGACGCTGGCCGCCTATCTGGTGGCGGCGGCA
GTCTTCGGCACATTCATGAC

Product: secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Integral Membrane Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; TadB Protein; Type II Secretion System Protein F; Type II Secretion System Protein F Domain; Tad Secretion System Pilus Assembly Protein; Secretion System Protein; Type II Secretion System; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Tight Adherence Protein B; Transmembrane Pilus Component Protein; Bacterial Type II Secretion System Protein F Domain Protein; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II Secretion System F Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MIPYIVAALAFLAIAGLGLVLTGGNDDAARKRARAISAGRGGAPVKGGKVVDENIRRRAKTQEMLEGLRRQDKERRRNDP
MRNIGSKLTQAGLEIPVPMFWLLSAVCGLICAGIVYISGADGLVINGISLKSRPVLIAAAFFGGTLGIPQFILNFLIKGR
HTKMINQFADALDIIVRGVRSGLPLNECIRVIAKESPEPLRKEFLTFADNLAMGAGLERSLAALYKRLPLQEINFFAIVL
IIQSKAGGNLSEALHNLSTVIRSRKMMREKVKALSSEAKASAMIIGSLPIAVGVMVFLTTPDYIMTLFTTETGHVILVVA
VGMMGSGITVMRNMMNFDM

Sequences:

>Translated_339_residues
MIPYIVAALAFLAIAGLGLVLTGGNDDAARKRARAISAGRGGAPVKGGKVVDENIRRRAKTQEMLEGLRRQDKERRRNDP
MRNIGSKLTQAGLEIPVPMFWLLSAVCGLICAGIVYISGADGLVINGISLKSRPVLIAAAFFGGTLGIPQFILNFLIKGR
HTKMINQFADALDIIVRGVRSGLPLNECIRVIAKESPEPLRKEFLTFADNLAMGAGLERSLAALYKRLPLQEINFFAIVL
IIQSKAGGNLSEALHNLSTVIRSRKMMREKVKALSSEAKASAMIIGSLPIAVGVMVFLTTPDYIMTLFTTETGHVILVVA
VGMMGSGITVMRNMMNFDM
>Mature_339_residues
MIPYIVAALAFLAIAGLGLVLTGGNDDAARKRARAISAGRGGAPVKGGKVVDENIRRRAKTQEMLEGLRRQDKERRRNDP
MRNIGSKLTQAGLEIPVPMFWLLSAVCGLICAGIVYISGADGLVINGISLKSRPVLIAAAFFGGTLGIPQFILNFLIKGR
HTKMINQFADALDIIVRGVRSGLPLNECIRVIAKESPEPLRKEFLTFADNLAMGAGLERSLAALYKRLPLQEINFFAIVL
IIQSKAGGNLSEALHNLSTVIRSRKMMREKVKALSSEAKASAMIIGSLPIAVGVMVFLTTPDYIMTLFTTETGHVILVVA
VGMMGSGITVMRNMMNFDM

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36637; Mature: 36637

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPYIVAALAFLAIAGLGLVLTGGNDDAARKRARAISAGRGGAPVKGGKVVDENIRRRAK
CCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
TQEMLEGLRRQDKERRRNDPMRNIGSKLTQAGLEIPVPMFWLLSAVCGLICAGIVYISGA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEECC
DGLVINGISLKSRPVLIAAAFFGGTLGIPQFILNFLIKGRHTKMINQFADALDIIVRGVR
CCEEEECCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SGLPLNECIRVIAKESPEPLRKEFLTFADNLAMGAGLERSLAALYKRLPLQEINFFAIVL
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHEEE
IIQSKAGGNLSEALHNLSTVIRSRKMMREKVKALSSEAKASAMIIGSLPIAVGVMVFLTT
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHCC
PDYIMTLFTTETGHVILVVAVGMMGSGITVMRNMMNFDM
CHHHEEEEECCCCCEEEEEEHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIPYIVAALAFLAIAGLGLVLTGGNDDAARKRARAISAGRGGAPVKGGKVVDENIRRRAK
CCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
TQEMLEGLRRQDKERRRNDPMRNIGSKLTQAGLEIPVPMFWLLSAVCGLICAGIVYISGA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEECC
DGLVINGISLKSRPVLIAAAFFGGTLGIPQFILNFLIKGRHTKMINQFADALDIIVRGVR
CCEEEECCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SGLPLNECIRVIAKESPEPLRKEFLTFADNLAMGAGLERSLAALYKRLPLQEINFFAIVL
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHEEE
IIQSKAGGNLSEALHNLSTVIRSRKMMREKVKALSSEAKASAMIIGSLPIAVGVMVFLTT
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHCC
PDYIMTLFTTETGHVILVVAVGMMGSGITVMRNMMNFDM
CHHHEEEEECCCCCEEEEEEHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA