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The map label for this gene is 114798130

Identifier: 114798130

GI number: 114798130

Start: 3177982

End: 3179001

Strand: Reverse

Name: 114798130

Synonym: HNE_3009

Alternate gene names: NA

Gene position: 3179001-3177982 (Counterclockwise)

Preceding gene: 114798049

Following gene: 114800113

Centisome position: 85.8

GC content: 61.08

Gene sequence:

>1020_bases
ATGTATGACTTCCTCGTCTCCTTCACCAAGCCCCAGACGCTGGCCGCCTATCTGGTGGCGGCGGCAGTCTTCGGCACATT
CATGACGATCTTTCTGCCCTATCTGCAGGGCAACAAGCTTGAAACCCGCCTCAAGGCCGTCGCCAGCCAGCGCGAAAAGC
TGCGCAAGCAGAGCCGCGCGGCGCTGGAAAAGAAAGGCCTGCGCCGCAAGGATGACAGCGTCGTCGGCTCCATCTCCTCG
AAGCTGAACCTCGCCCAGGCGCTGGAAGATCCCAACGTCGTCAAGCTGATGAACCAGGCGGGCTTGCGCGGTCCAGGCCC
CATCTCGGCCTTCTATTTTGCGCGGATGGCCATGCCGTTCGCCGGCGCGGGCCTGATGTTCTTCTACATCTTCTTCGTCA
ACGATCACGGCCTCAGCCAGTTCATGAAATACGGCTCGGTCATCTTCGGCGCAGCGGCGGGCTTTTACGCGCCCAACCTC
TACATTTCAAACCTCGCCCAGAAGCGTCAGAAATCCCTCATGCGCGCGTTTCCCGATGCGCTGGACATGCTGCTGATCTG
TGTAGAGGCGGGCATGTCGATCGAAATGGGTTTCAACAAGGTCAGCCAGGAAATCGGCTCGGCCTCGCCTGAACTCGCCG
AGGAATTCGGCATCACGGTGGCCGAGCTGTCCTATCTGCCAGATCGCCGGCTGGCATATGAAAACCTGGCCCTGCGCACC
GGCCATGAAGGCGTCAAGGCTGTCTGTATGGCGCTTGGCCAGGCCGAGCGCTACGGCACACCGCTGGGCGACGCGCTGCG
TATGATGGCCAAGGAAAACCGCGAGATGCGGATGTCGGAGGCCGAGAAAAAAGCCGCCTCGCTGCCCGCAAAGCTCACCG
TGCCGATGATCCTGTTCTTCCTGCCGGTCCTGTTCCTGGTCGTGCTTGGCCCAGCCTACATTCAGTATCAGGCGATGCAG
AAGGAAAATGAAGTGGCGCCGGAAATCGCGCAGGCCGAGCGTCCCGCCGACATCGGCTGA

Upstream 100 bases:

>100_bases
CGGGTCACGTCATCCTCGTCGTCGCAGTAGGTATGATGGGCTCGGGCATCACGGTCATGCGCAATATGATGAACTTTGAT
ATGTGAGGCGCAGGCAACAG

Downstream 100 bases:

>100_bases
AACACGCACGGGCGCGCCGCGCCTGCGTAGCGCCCGGCCGGATCGATCAGATTTATATCTGTTGACGGATTAATGGTTCA
GCGTGCCGCGCAGCTGGCGT

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; TadC Pilus Assembly Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; TadC Family Type II/IV Secretion System Protein; Type II Secretion System; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Type II Secretion System Protein F Domain Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Bacterial Type II Secretion System Protein; Fimbriae-Related Membrane Protein; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Integral Membrane Protein; Pilus Assemble Protein; Von Willebrand Factor Type A; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Component Of Pilus Protein; Tight Adherence Protein C; Components Of Type IV Pilus

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MYDFLVSFTKPQTLAAYLVAAAVFGTFMTIFLPYLQGNKLETRLKAVASQREKLRKQSRAALEKKGLRRKDDSVVGSISS
KLNLAQALEDPNVVKLMNQAGLRGPGPISAFYFARMAMPFAGAGLMFFYIFFVNDHGLSQFMKYGSVIFGAAAGFYAPNL
YISNLAQKRQKSLMRAFPDALDMLLICVEAGMSIEMGFNKVSQEIGSASPELAEEFGITVAELSYLPDRRLAYENLALRT
GHEGVKAVCMALGQAERYGTPLGDALRMMAKENREMRMSEAEKKAASLPAKLTVPMILFFLPVLFLVVLGPAYIQYQAMQ
KENEVAPEIAQAERPADIG

Sequences:

>Translated_339_residues
MYDFLVSFTKPQTLAAYLVAAAVFGTFMTIFLPYLQGNKLETRLKAVASQREKLRKQSRAALEKKGLRRKDDSVVGSISS
KLNLAQALEDPNVVKLMNQAGLRGPGPISAFYFARMAMPFAGAGLMFFYIFFVNDHGLSQFMKYGSVIFGAAAGFYAPNL
YISNLAQKRQKSLMRAFPDALDMLLICVEAGMSIEMGFNKVSQEIGSASPELAEEFGITVAELSYLPDRRLAYENLALRT
GHEGVKAVCMALGQAERYGTPLGDALRMMAKENREMRMSEAEKKAASLPAKLTVPMILFFLPVLFLVVLGPAYIQYQAMQ
KENEVAPEIAQAERPADIG
>Mature_339_residues
MYDFLVSFTKPQTLAAYLVAAAVFGTFMTIFLPYLQGNKLETRLKAVASQREKLRKQSRAALEKKGLRRKDDSVVGSISS
KLNLAQALEDPNVVKLMNQAGLRGPGPISAFYFARMAMPFAGAGLMFFYIFFVNDHGLSQFMKYGSVIFGAAAGFYAPNL
YISNLAQKRQKSLMRAFPDALDMLLICVEAGMSIEMGFNKVSQEIGSASPELAEEFGITVAELSYLPDRRLAYENLALRT
GHEGVKAVCMALGQAERYGTPLGDALRMMAKENREMRMSEAEKKAASLPAKLTVPMILFFLPVLFLVVLGPAYIQYQAMQ
KENEVAPEIAQAERPADIG

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37379; Mature: 37379

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDFLVSFTKPQTLAAYLVAAAVFGTFMTIFLPYLQGNKLETRLKAVASQREKLRKQSRA
CCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALEKKGLRRKDDSVVGSISSKLNLAQALEDPNVVKLMNQAGLRGPGPISAFYFARMAMPF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
AGAGLMFFYIFFVNDHGLSQFMKYGSVIFGAAAGFYAPNLYISNLAQKRQKSLMRAFPDA
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LDMLLICVEAGMSIEMGFNKVSQEIGSASPELAEEFGITVAELSYLPDRRLAYENLALRT
HHHHHHHHHCCCEEEHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHC
GHEGVKAVCMALGQAERYGTPLGDALRMMAKENREMRMSEAEKKAASLPAKLTVPMILFF
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LPVLFLVVLGPAYIQYQAMQKENEVAPEIAQAERPADIG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MYDFLVSFTKPQTLAAYLVAAAVFGTFMTIFLPYLQGNKLETRLKAVASQREKLRKQSRA
CCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ALEKKGLRRKDDSVVGSISSKLNLAQALEDPNVVKLMNQAGLRGPGPISAFYFARMAMPF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
AGAGLMFFYIFFVNDHGLSQFMKYGSVIFGAAAGFYAPNLYISNLAQKRQKSLMRAFPDA
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LDMLLICVEAGMSIEMGFNKVSQEIGSASPELAEEFGITVAELSYLPDRRLAYENLALRT
HHHHHHHHHCCCEEEHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHC
GHEGVKAVCMALGQAERYGTPLGDALRMMAKENREMRMSEAEKKAASLPAKLTVPMILFF
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LPVLFLVVLGPAYIQYQAMQKENEVAPEIAQAERPADIG
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA