The gene/protein map for NC_008358 is currently unavailable.
Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is surA [H]

Identifier: 114797858

GI number: 114797858

Start: 2238936

End: 2240183

Strand: Direct

Name: surA [H]

Synonym: HNE_2150

Alternate gene names: 114797858

Gene position: 2238936-2240183 (Clockwise)

Preceding gene: 114798255

Following gene: 114798861

Centisome position: 60.43

GC content: 61.94

Gene sequence:

>1248_bases
ATGGTACGTGTGGTGTTCTTGGCAGCAGCTTTTGCCGCGATCAGCGTGTTCGGCGCGCCCGTTTCGCCCGCCAGCGCGCA
GGAAGCGGACCGGCAAACGCTTGAGGGCATCGCCGCTATCGTTAATGACAAGCCGATCTCCTACTCGGACGTTCGCCAGC
GCGCGCGCCTCCTCCTTCTGACGATTGGCGCGTCGCAGCCGACTCAGGAACAGGTTCAGCAGATCACCGGCCAGGCGCTT
GAGCAGCTGATCGACGAAAAACTGCAGCTCGACCGCGTGTCCGAATTCGAGGTTGAGGTTGATCCTGTCGAAATTGACGC
CGCGGTTCAGAATATGGCGAGCGAGGCGGGCGTGACCGGCGAGGTTCTCCGCGAGCAGCTGACCTCCTCGGGTGTAAACC
CGGCCAGCCTTGAAGAGCAGATGCGCGCTGAAATCGCCTGGAACCGCCTGATGAGCGGGCTTTACGGAAACCGTATCCGC
ATTTCAGAGAATCAGGTCGACGATCAGATGTCGCGTCTGCGCACGGCATCTCAGAAGACCCAATACCGGATTGGCGAGAT
TTTCCTGTACGCTCCGGACGAAGCCACCAAAACCGAAGCGCTGACGGCCGCTGAGTCCATCATCAGCCAGCTTCAGCAGG
GCGCCGACTTCCGCGTTGCCGCCCAACGTATCTCCTCTGCGCCGACAGCGGCCGCAGGCGGCGACATGGGCTGGGTTACG
ATCGAGGATATTGATCCGACCATCGCCGAGGCCGTGAGGAATAGCTCCGGCAATGGTCTGCTGGAGCCGATCCAGACCGA
GAATGGCATTTACATCATCCTGCTCGGTGGCAAGCGCGAACCGGCGGAACCGGTTACCCGCGTGGATCTGAAGCGCCTCG
TTGCCGCTGACGGCGTCGAAGCGACCCTCACCGAGGCAATCGGCCGTATCAACAGCTGCGATGACGTCCAGTCTGTTGCC
AACACGAACTCCGGCCTGCGCGCGCAGGACATTGCAGACATCAATGTCGATGAACTCGGCCCCGAAGGCCGCAGCCTCGT
CCTCGCGACCGATGTCGGCCAGCCGACTGAAATCTTCGCGGTCAGCTCTGGCCTTGCGGTCATGTATGTCTGCCGCCGTC
AGGATGGCGCCGAAGCGCTGCCCTCGCGCGAAGACCTCAAAGGCTCCCTCAAGTCGCGGGAGTTGAACATGATCTCCGAG
CGGGAACTGCGCAATGCTCGCCGCCTGGCGACCATCATCTACCGCTAG

Upstream 100 bases:

>100_bases
GTGACTGTAGCGGCACGTTGCACGATGAAACGAGACTTGTAAGGTCCGGAAGCGAAAAACAGGCTTGTTCCCGACCCTCG
GGGAGCCATGGAGACGTCGT

Downstream 100 bases:

>100_bases
GACAGGCGATTCCGCTTGATCCGCTGCGCGATTGGCGCGACACCCCCGCGCGTGACCTCGCCTTCCCTCCTTCCTCTGGC
CCTAACCATGGGCGACCCTG

Product: peptidyl-prolyl cis-trans isomerase domain-containing protein

Products: NA

Alternate protein names: Peptidyl-prolyl cis-trans isomerase surA; PPIase surA; Rotamase surA [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MVRVVFLAAAFAAISVFGAPVSPASAQEADRQTLEGIAAIVNDKPISYSDVRQRARLLLLTIGASQPTQEQVQQITGQAL
EQLIDEKLQLDRVSEFEVEVDPVEIDAAVQNMASEAGVTGEVLREQLTSSGVNPASLEEQMRAEIAWNRLMSGLYGNRIR
ISENQVDDQMSRLRTASQKTQYRIGEIFLYAPDEATKTEALTAAESIISQLQQGADFRVAAQRISSAPTAAAGGDMGWVT
IEDIDPTIAEAVRNSSGNGLLEPIQTENGIYIILLGGKREPAEPVTRVDLKRLVAADGVEATLTEAIGRINSCDDVQSVA
NTNSGLRAQDIADINVDELGPEGRSLVLATDVGQPTEIFAVSSGLAVMYVCRRQDGAEALPSREDLKGSLKSRELNMISE
RELRNARRLATIIYR

Sequences:

>Translated_415_residues
MVRVVFLAAAFAAISVFGAPVSPASAQEADRQTLEGIAAIVNDKPISYSDVRQRARLLLLTIGASQPTQEQVQQITGQAL
EQLIDEKLQLDRVSEFEVEVDPVEIDAAVQNMASEAGVTGEVLREQLTSSGVNPASLEEQMRAEIAWNRLMSGLYGNRIR
ISENQVDDQMSRLRTASQKTQYRIGEIFLYAPDEATKTEALTAAESIISQLQQGADFRVAAQRISSAPTAAAGGDMGWVT
IEDIDPTIAEAVRNSSGNGLLEPIQTENGIYIILLGGKREPAEPVTRVDLKRLVAADGVEATLTEAIGRINSCDDVQSVA
NTNSGLRAQDIADINVDELGPEGRSLVLATDVGQPTEIFAVSSGLAVMYVCRRQDGAEALPSREDLKGSLKSRELNMISE
RELRNARRLATIIYR
>Mature_415_residues
MVRVVFLAAAFAAISVFGAPVSPASAQEADRQTLEGIAAIVNDKPISYSDVRQRARLLLLTIGASQPTQEQVQQITGQAL
EQLIDEKLQLDRVSEFEVEVDPVEIDAAVQNMASEAGVTGEVLREQLTSSGVNPASLEEQMRAEIAWNRLMSGLYGNRIR
ISENQVDDQMSRLRTASQKTQYRIGEIFLYAPDEATKTEALTAAESIISQLQQGADFRVAAQRISSAPTAAAGGDMGWVT
IEDIDPTIAEAVRNSSGNGLLEPIQTENGIYIILLGGKREPAEPVTRVDLKRLVAADGVEATLTEAIGRINSCDDVQSVA
NTNSGLRAQDIADINVDELGPEGRSLVLATDVGQPTEIFAVSSGLAVMYVCRRQDGAEALPSREDLKGSLKSRELNMISE
RELRNARRLATIIYR

Specific function: Chaperone involved in the correct folding and assembly of outer membrane proteins. It recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act

COG id: COG0760

COG function: function code O; Parvulin-like peptidyl-prolyl isomerase

Gene ontology:

Cell location: Periplasm. Note=Is capable of associating with the outer membrane (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PpiC domains [H]

Homologues:

Organism=Escherichia coli, GI1786238, Length=202, Percent_Identity=26.2376237623762, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000297
- InterPro:   IPR023058
- InterPro:   IPR023034
- InterPro:   IPR015391
- InterPro:   IPR008880 [H]

Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 44894; Mature: 44894

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS50198 PPIC_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRVVFLAAAFAAISVFGAPVSPASAQEADRQTLEGIAAIVNDKPISYSDVRQRARLLLL
CEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEE
TIGASQPTQEQVQQITGQALEQLIDEKLQLDRVSEFEVEVDPVEIDAAVQNMASEAGVTG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCH
EVLREQLTSSGVNPASLEEQMRAEIAWNRLMSGLYGNRIRISENQVDDQMSRLRTASQKT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH
QYRIGEIFLYAPDEATKTEALTAAESIISQLQQGADFRVAAQRISSAPTAAAGGDMGWVT
HEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEE
IEDIDPTIAEAVRNSSGNGLLEPIQTENGIYIILLGGKREPAEPVTRVDLKRLVAADGVE
EECCCHHHHHHHHCCCCCCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCH
ATLTEAIGRINSCDDVQSVANTNSGLRAQDIADINVDELGPEGRSLVLATDVGQPTEIFA
HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCEEEE
VSSGLAVMYVCRRQDGAEALPSREDLKGSLKSRELNMISERELRNARRLATIIYR
ECCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVRVVFLAAAFAAISVFGAPVSPASAQEADRQTLEGIAAIVNDKPISYSDVRQRARLLLL
CEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEE
TIGASQPTQEQVQQITGQALEQLIDEKLQLDRVSEFEVEVDPVEIDAAVQNMASEAGVTG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCH
EVLREQLTSSGVNPASLEEQMRAEIAWNRLMSGLYGNRIRISENQVDDQMSRLRTASQKT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH
QYRIGEIFLYAPDEATKTEALTAAESIISQLQQGADFRVAAQRISSAPTAAAGGDMGWVT
HEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEE
IEDIDPTIAEAVRNSSGNGLLEPIQTENGIYIILLGGKREPAEPVTRVDLKRLVAADGVE
EECCCHHHHHHHHCCCCCCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCH
ATLTEAIGRINSCDDVQSVANTNSGLRAQDIADINVDELGPEGRSLVLATDVGQPTEIFA
HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCEEEE
VSSGLAVMYVCRRQDGAEALPSREDLKGSLKSRELNMISERELRNARRLATIIYR
ECCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA