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The map label for this gene is omp16 [H]

Identifier: 114797840

GI number: 114797840

Start: 137204

End: 137746

Strand: Direct

Name: omp16 [H]

Synonym: HNE_0155

Alternate gene names: 114797840

Gene position: 137204-137746 (Clockwise)

Preceding gene: 114798605

Following gene: 114800143

Centisome position: 3.7

GC content: 61.88

Gene sequence:

>543_bases
ATGCATATTCTACTGAAAGCCTCTGCCGCTGCCGCTCTGCTGGCCGCAACGGCAGCATGCGCTTCCCGTCCTCCCCCGGT
CGAAGAACCGGTTACCCCTCCGCCGGTCGAAGAGACCGTCACGGAAACGGAAACCGTTGTCACCGAGCCGGTTGTTGAAT
CCTCGATCACACCGGGCTCGCTGGAAGATTTCCGCGTGAACGTTGGTGAGCGCGTCTATTTCGACCTCGACCAGTACGGC
CTCGACTCTGACGACCAGGAAATCCTGAAGCGTCAGGCAGCCTGGCTGAACGCCTACCCGAACGTTCGCGTTCTCGTGGC
CGGCAACGCTGACGAGCGCGGCACGCGTGAGTACAACCTCGCCCTCGGCGAGCGTCGTGCCAGCGCTGCAAAAGACTACC
TCGTCAGCCTCGGCGTCAGCGCTTCGCGCGTTGATACCGTCTCTTACGGCAAAGAGCGTCCGGTCGCTGGCGGCTCGAAT
GACGAGTCGTGGGCAATGAACCGTAACGCATGGACACAGATCGTTTCCGGCGCCACCAGCTAA

Upstream 100 bases:

>100_bases
AGAATAAGGAAATATAGGCCCGATAAGACGGCCGCCGACATACAGAAGCCGCGAAGCGGTCCGTAAAGTGCCACCTGAAG
TAAACTTGGAGCCCCGACAC

Downstream 100 bases:

>100_bases
GGCGTACTGCGTTTACGTGATGAAAAGGACAGCCGGGTGCCATAATTTGGCCCCGGCTGTTTCTTTTATTGCCCAGGGCT
GCAGTCTGCCCCCTCGCACC

Product: OmpA family protein

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MHILLKASAAAALLAATAACASRPPPVEEPVTPPPVEETVTETETVVTEPVVESSITPGSLEDFRVNVGERVYFDLDQYG
LDSDDQEILKRQAAWLNAYPNVRVLVAGNADERGTREYNLALGERRASAAKDYLVSLGVSASRVDTVSYGKERPVAGGSN
DESWAMNRNAWTQIVSGATS

Sequences:

>Translated_180_residues
MHILLKASAAAALLAATAACASRPPPVEEPVTPPPVEETVTETETVVTEPVVESSITPGSLEDFRVNVGERVYFDLDQYG
LDSDDQEILKRQAAWLNAYPNVRVLVAGNADERGTREYNLALGERRASAAKDYLVSLGVSASRVDTVSYGKERPVAGGSN
DESWAMNRNAWTQIVSGATS
>Mature_180_residues
MHILLKASAAAALLAATAACASRPPPVEEPVTPPPVEETVTETETVVTEPVVESSITPGSLEDFRVNVGERVYFDLDQYG
LDSDDQEILKRQAAWLNAYPNVRVLVAGNADERGTREYNLALGERRASAAKDYLVSLGVSASRVDTVSYGKERPVAGGSN
DESWAMNRNAWTQIVSGATS

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=99, Percent_Identity=50.5050505050505, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 19323; Mature: 19323

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILLKASAAAALLAATAACASRPPPVEEPVTPPPVEETVTETETVVTEPVVESSITPGS
CEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCC
LEDFRVNVGERVYFDLDQYGLDSDDQEILKRQAAWLNAYPNVRVLVAGNADERGTREYNL
CHHEEECCCCEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEH
ALGERRASAAKDYLVSLGVSASRVDTVSYGKERPVAGGSNDESWAMNRNAWTQIVSGATS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHCCCCC
>Mature Secondary Structure
MHILLKASAAAALLAATAACASRPPPVEEPVTPPPVEETVTETETVVTEPVVESSITPGS
CEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCC
LEDFRVNVGERVYFDLDQYGLDSDDQEILKRQAAWLNAYPNVRVLVAGNADERGTREYNL
CHHEEECCCCEEEEEHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEH
ALGERRASAAKDYLVSLGVSASRVDTVSYGKERPVAGGSNDESWAMNRNAWTQIVSGATS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]